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Sequences
The following sequences are available for this feature:
mRNA from alignment at An19:18270..19213+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011213-T1 ID=CBS51388_011213-T1|Name=CBS51388_011213-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=944bp|location=Sequence derived from alignment at An19:18270..19213+ (Aspergillus niger CBS 513.88)
ATGAACGTACAACCTGCTTCAGGTTCGGCTGCGCCTTCTACTTGGGGTGA
GATTTATCAAGTTTCAGGCCGGACATCTCTGGAAATCCTTCTGAAAGCAA
GAGAGCTATGCCTGAGTGGGGATATCCAACAATTCCGCGACCTCATTGAC
TCGGCGCAATCGTCCTCGGAGAACTTTCATATAGATGACTTCGGTATTAT
CATGGGGCAGGCTGTCGAGCAAGACAGCGTGATCTTCATGCGGGCGCTGA
TGGATCGTGGCTTTCCCACGCATTCAATCTACGCCCGGAACGCGACCAGA
TTCAAATCCAAGAATGCACTCGCCCTTCTCATTGAGAAGGGATGGGATAT
CAACGAGCCAATGTGCGAGACCCAACCCCCCGTCCTAGGGTGAGACAATA
CTCCAATCCTTCGCGAGATAACATTTTACTAATCCCTCTCAGCATTGCCA
TAGAGGACGAAGAGATGACAACTTGGTTTTTGGATCATGGAGCCGATCCT
AATAGACGTACATTCATAGACCTTACCCCGCTTTCGTGGGCTGTTGAAAG
ATCACCCGTTTCCATTATCCGCCTCATGCTGGATTATTGCCCAAATATTC
ATCCAGGCCAGCTGCTTCATCATGCGGTCCAACGCGAATCTGACACTATC
GAAGTACTGGAAATGTTGATTCAGAAGGGAGCGCCTCTTAACACTTCCGT
GCACGAAGACCTTCCTACCTTATCGATACTTTGCTTTATGCCTCTAGGAA
CTGCTCTGCACCGGGCATGTGAGCTCGGAAAAGTGGATGTGGTTCGCTAT
CTCCTCAGCAAAGGAGCCGACCATAGTGTCAGAGATAGTAATGGACTTAC
AGCTATTGAACTGGCTGCTAGATTGAACCAGCAAGAAGTGGTTGAAGTGC
TGCAGAAACATAGAAACGTCGGAAATCCCGTTGACCACCCCTGA back to topCoding sequence (CDS) from alignment at An19:18270..19213+ >CBS51388_011213-T1 ID=CBS51388_011213-T1|Name=CBS51388_011213-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1782bp|location=Sequence derived from alignment at An19:18270..19213+ (Aspergillus niger CBS 513.88)
ATGAACGTACAACCTGCTTCAGGTTCGGCTGCGCCTTCTACTTGGGGTGA
GATTTATCAAGTTTCAGGCCGGACATCTCTGGAAATCCTTCTGAAAGCAA
GAGAGCTATGCCTGAGTGGGGATATCCAACAATTCCGCGACCTCATTGAC
TCGGCGCAATCGTCCTCGGAGAACTTTCATATAGATGACTTCGGTATTAT
CATGGGGCAGGCTGTCGAGCAAGACAGCGTGATCTTCATGCGGGCGCTGA
TGGATCGTGGCTTTCCCACGCATTCAATCTACGCCCGGAACGCGACCAGA
TTCAAATCCAAGAATGCACTCGCCCTTCTCATTGAGAAGGGATGGGATAT
CAACGAGCCAATGTGCGAGACCCAACCCCCCGTCCTAGGCATTGCCATAG
AGGACGAAGAGATGACAACTTGGTTTTTGGATCATGGAGCCGATCCTAAT
AGACGTACATTCATAGACCTTACCCCGCTTTCGTGGGCTGTTGAAAGATC
ACCCGTTTCCATTATCCGCCTCATGCTGGATTATTGCCCAAATATTCATC
CAGGCCAGCTGCTTCATCATGCGGTCCAACGCGAATCTGACACTATCGAA
GTACTGGAAATGTTGATTCAGAAGGGAGCGCCTCTTAACACTTCCGTGCA
CGAAGACCTTCCTACCTTATCGATACTTTGCTTTATGCCTCTAGGAACTG
CTCTGCACCGGGCATGTGAGCTCGGAAAAGTGGATGTGGTTCGCTATCTC
CTCAGCAAAGGAGCCGACCATAGTGTCAGAGATAGTAATGGACTTACAGC
TATTGAACTGGCTGCTAGATTGAACCAGCAAGAAGTGGTTGAAGTGCTGC
AGAAACATAGAAACGTCGGAAATCCCGTTGACCACCCCTGAATGAACGTA
CAACCTGCTTCAGGTTCGGCTGCGCCTTCTACTTGGGGTGAGATTTATCA
AGTTTCAGGCCGGACATCTCTGGAAATCCTTCTGAAAGCAAGAGAGCTAT
GCCTGAGTGGGGATATCCAACAATTCCGCGACCTCATTGACTCGGCGCAA
TCGTCCTCGGAGAACTTTCATATAGATGACTTCGGTATTATCATGGGGCA
GGCTGTCGAGCAAGACAGCGTGATCTTCATGCGGGCGCTGATGGATCGTG
GCTTTCCCACGCATTCAATCTACGCCCGGAACGCGACCAGATTCAAATCC
AAGAATGCACTCGCCCTTCTCATTGAGAAGGGATGGGATATCAACGAGCC
AATGTGCGAGACCCAACCCCCCGTCCTAGGCATTGCCATAGAGGACGAAG
AGATGACAACTTGGTTTTTGGATCATGGAGCCGATCCTAATAGACGTACA
TTCATAGACCTTACCCCGCTTTCGTGGGCTGTTGAAAGATCACCCGTTTC
CATTATCCGCCTCATGCTGGATTATTGCCCAAATATTCATCCAGGCCAGC
TGCTTCATCATGCGGTCCAACGCGAATCTGACACTATCGAAGTACTGGAA
ATGTTGATTCAGAAGGGAGCGCCTCTTAACACTTCCGTGCACGAAGACCT
TCCTACCTTATCGATACTTTGCTTTATGCCTCTAGGAACTGCTCTGCACC
GGGCATGTGAGCTCGGAAAAGTGGATGTGGTTCGCTATCTCCTCAGCAAA
GGAGCCGACCATAGTGTCAGAGATAGTAATGGACTTACAGCTATTGAACT
GGCTGCTAGATTGAACCAGCAAGAAGTGGTTGAAGTGCTGCAGAAACATA
GAAACGTCGGAAATCCCGTTGACCACCCCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An19 | supercontig | An19:18270..19213 + |
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