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ATCC10864_000224-T1, ATCC10864_000224-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000224-T1
Unique NameATCC10864_000224-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:617137..619034-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000224-T1 ID=ATCC10864_000224-T1|Name=ATCC10864_000224-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1898bp|location=Sequence derived from alignment at MCQH01000006:617137..619034- (Aspergillus niger ATCC 10864)
ATGTCGGTCTCTGCAGCAAATTCCCCCGGCGTTGAGGACAGGGCTAGTGA
CACCGAGAAAATCGCGCACGAAACTCCCACCTACACGAGCGCACCGACAA
AATGGCGCCAGATTGCGATACTATTGGCATTGTATCTGGTGATGTTTGCA
GTTGCCCTGGTATTCTTTCATATTTATTCTGCTTCAGAAATCTCGGTTAC
ACAAACGCAGGGCTAATGCGTTGATACTATGGCAGGACAACACGATGCTG
GCACCTGCTCTCCCCGTCATCACGGACGATTTCCATTCCCTCAACGATAT
GGGATGGTACAGCTCAGTCTATTTACTGACCATGTGCGCCACGCAGATCC
TCCACGGTCGGCTTTGCACCATGTTCTCTATTAAATGGGTTTACATGATA
AATCTGGTAATCTTTGAAATCGGGTCCGTAGTGTCAGCGGCAACTCCCAC
CTCGGTTGGCTTGATACTTGGACGGGCTATCACAGGAATAGGCGCGGCGG
GACTTCTTTCGGGCACCATCTTACTCATTGCTGCTAGTATGTCTTTGCAG
TTGCAGGCAACAGCTTTAGGTATTTTGGGAGGGTTGAAGGGTGCTGCAGC
CGTGGCTGGGCCATTGTCAGATATTTCCCTTTCCTCGACCTGCGTCTCCA
GTAGAGTATACAGTTCAATGCTGACGAACAAAACAATCATAGATTGGGCG
GGGCTTTCACGGACAAAGTCTCCTGGCGATGGTGCTTCTACATTAATCTC
TCCCTGGGCGGAGTCGGCGCCGTGGCTATCCTTTTCCTATTCCATGCACC
ACCTCCTACCTTCGTCCCTGACGCTATGAAGGGTAGCCCACTAAAGCAAC
GCCTCATCCAGCTCGATATTGAAGGCACGGTACTCTTCAGTGCAAGCATT
ATCTGCCTTCTCCTTGCTATCGAATGGGGCGGGGCAAAATGGTCCTGGAG
CAACGGGCGCATCGTCGCCCTGTTCGTGATCTTCGGCGTCACCTTAATTG
TCTTCTGCATAGTGCAGAGCAGGAAGAAAGAAATGGCAATGATCCCACCA
CGAGTAGCTGGGAACCGCAATGTCTGGAGCTGCGGCCTCTATAGCGCTAT
GCTTGGAGCCGCATTCTATATTCTCGTTTATTATGCAAGTCCTCTTCATC
ATGCATCCGCTCCATAACAACAATAACATAGTTTTTCCCCATACTAACAG
ACGTCTGTTCCCCACAGCTTCCAATCTGGTTCCAAGTAATCAAAGGTGTC
TCCGCCGTACGGTCGGGAATCATGAACCTCCCCATGCTCGTATCGCTTAT
CGTGCTCTCCATTCCCAGCGGTGCCCTAGTCTCCGCCATGGGGTACTACA
CTCCTACTATGATCATGGGCTGTATTCTGGTGCTCATTAGCGCTGCCCTC
ATGACGACATTCACTCCGGACACGGGGACCGTAAAATGGGCCGGATACCA
AGTTATTATGGGCGCCGGGATTGGTATGGGCGCGCAGCAAACCGTCCTCG
CTATGCAGGCTTCGCTGCCCTCAGAAGACGTTCCCGTTGGTACAGCACTT
ATGATATTCTATCAGACGCTGGGTGGTGCTGTCTTCCTTATTGTGGCGCA
GAATTTGTTTCAGCATGAGCTGGTGAAGAGATTGACAGGTAGGAATATTC
CGGGTGTAGATGCGAGCAGTGTAGCCGCTGCGGGAGCGACAGAGGTTAGG
AACTTAGTGCCCCCGAAGTATTTGGGAGAGTCATTGGAGGCGTATAATGG
TGCGGTGGTGAAGACGTTTTATATCTCGGTTGCGTTGGCGGCGGTGGCGG
TTTTAGCTACGTTTGTGCCAGAGTGGAAGTCGGTTAAGACGGTGGCGAAG
AGGGAAGAGCAGGAAAATATCGAGAGTGGAGGGAATGAGGTTGTGTAG
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Coding sequence (CDS) from alignment at MCQH01000006:617137..619034-

>ATCC10864_000224-T1 ID=ATCC10864_000224-T1|Name=ATCC10864_000224-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6732bp|location=Sequence derived from alignment at MCQH01000006:617137..619034- (Aspergillus niger ATCC 10864)
ACGTCTGTTCCCCACAGCTTCCAATCTGGTTCCAAGTAATCAAAGGTGTC
TCCGCCGTACGGTCGGGAATCATGAACCTCCCCATGCTCGTATCGCTTAT
CGTGCTCTCCATTCCCAGCGGTGCCCTAGTCTCCGCCATGGGGTACTACA
CTCCTACTATGATCATGGGCTGTATTCTGGTGCTCATTAGCGCTGCCCTC
ATGACGACATTCACTCCGGACACGGGGACCGTAAAATGGGCCGGATACCA
AGTTATTATGGGCGCCGGGATTGGTATGGGCGCGCAGCAAACCGTCCTCG
CTATGCAGGCTTCGCTGCCCTCAGAAGACGTTCCCGTTGGTACAGCACTT
ATGATATTCTATCAGACGCTGGGTGGTGCTGTCTTCCTTATTGTGGCGCA
GAATTTGTTTCAGCATGAGCTGGTGAAGAGATTGACAGGTAGGAATATTC
CGGGTGTAGATGCGAGCAGTGTAGCCGCTGCGGGAGCGACAGAGGTTAGG
AACTTAGTGCCCCCGAAGTATTTGGGAGAGTCATTGGAGGCGTATAATGG
TGCGGTGGTGAAGACGTTTTATATCTCGGTTGCGTTGGCGGCGGTGGCGG
TTTTAGCTACGTTTGTGCCAGAGTGGAAGTCGGTTAAGACGGTGGCGAAG
AGGGAAGAGCAGGAAAATATCGAGAGTGGAGGGAATGAGGTTGTGTAGAT
TGGGCGGGGCTTTCACGGACAAAGTCTCCTGGCGATGGTGCTTCTACATT
AATCTCTCCCTGGGCGGAGTCGGCGCCGTGGCTATCCTTTTCCTATTCCA
TGCACCACCTCCTACCTTCGTCCCTGACGCTATGAAGGGTAGCCCACTAA
AGCAACGCCTCATCCAGCTCGATATTGAAGGCACGGTACTCTTCAGTGCA
AGCATTATCTGCCTTCTCCTTGCTATCGAATGGGGCGGGGCAAAATGGTC
CTGGAGCAACGGGCGCATCGTCGCCCTGTTCGTGATCTTCGGCGTCACCT
TAATTGTCTTCTGCATAGTGCAGAGCAGGAAGAAAGAAATGGCAATGATC
CCACCACGAGTAGCTGGGAACCGCAATGTCTGGAGCTGCGGCCTCTATAG
CGCTATGCTTGGAGCCGCATTCTATATTCTCGTTTATTATGCAAGACAAC
ACGATGCTGGCACCTGCTCTCCCCGTCATCACGGACGATTTCCATTCCCT
CAACGATATGGGATGGTACAGCTCAGTCTATTTACTGACCATGTGCGCCA
CGCAGATCCTCCACGGTCGGCTTTGCACCATGTTCTCTATTAAATGGGTT
TACATGATAAATCTGGTAATCTTTGAAATCGGGTCCGTAGTGTCAGCGGC
AACTCCCACCTCGGTTGGCTTGATACTTGGACGGGCTATCACAGGAATAG
GCGCGGCGGGACTTCTTTCGGGCACCATCTTACTCATTGCTGCTAGTATG
TCTTTGCAGTTGCAGGCAACAGCTTTAGGTATTTTGGGAGGGTTGAAGGG
TGCTGCAGCCGTGGCTGGGCCATTATGTCGGTCTCTGCAGCAAATTCCCC
CGGCGTTGAGGACAGGGCTAGTGACACCGAGAAAATCGCGCACGAAACTC
CCACCTACACGAGCGCACCGACAAAATGGCGCCAGATTGCGATACTATTG
GCATTGTATCTGGTGATGTTTGCAGTTGCCCTGACGTCTGTTCCCCACAG
CTTCCAATCTGGTTCCAAGTAATCAAAGGTGTCTCCGCCGTACGGTCGGG
AATCATGAACCTCCCCATGCTCGTATCGCTTATCGTGCTCTCCATTCCCA
GCGGTGCCCTAGTCTCCGCCATGGGGTACTACACTCCTACTATGATCATG
GGCTGTATTCTGGTGCTCATTAGCGCTGCCCTCATGACGACATTCACTCC
GGACACGGGGACCGTAAAATGGGCCGGATACCAAGTTATTATGGGCGCCG
GGATTGGTATGGGCGCGCAGCAAACCGTCCTCGCTATGCAGGCTTCGCTG
CCCTCAGAAGACGTTCCCGTTGGTACAGCACTTATGATATTCTATCAGAC
GCTGGGTGGTGCTGTCTTCCTTATTGTGGCGCAGAATTTGTTTCAGCATG
AGCTGGTGAAGAGATTGACAGGTAGGAATATTCCGGGTGTAGATGCGAGC
AGTGTAGCCGCTGCGGGAGCGACAGAGGTTAGGAACTTAGTGCCCCCGAA
GTATTTGGGAGAGTCATTGGAGGCGTATAATGGTGCGGTGGTGAAGACGT
TTTATATCTCGGTTGCGTTGGCGGCGGTGGCGGTTTTAGCTACGTTTGTG
CCAGAGTGGAAGTCGGTTAAGACGGTGGCGAAGAGGGAAGAGCAGGAAAA
TATCGAGAGTGGAGGGAATGAGGTTGTGTAGATTGGGCGGGGCTTTCACG
GACAAAGTCTCCTGGCGATGGTGCTTCTACATTAATCTCTCCCTGGGCGG
AGTCGGCGCCGTGGCTATCCTTTTCCTATTCCATGCACCACCTCCTACCT
TCGTCCCTGACGCTATGAAGGGTAGCCCACTAAAGCAACGCCTCATCCAG
CTCGATATTGAAGGCACGGTACTCTTCAGTGCAAGCATTATCTGCCTTCT
CCTTGCTATCGAATGGGGCGGGGCAAAATGGTCCTGGAGCAACGGGCGCA
TCGTCGCCCTGTTCGTGATCTTCGGCGTCACCTTAATTGTCTTCTGCATA
GTGCAGAGCAGGAAGAAAGAAATGGCAATGATCCCACCACGAGTAGCTGG
GAACCGCAATGTCTGGAGCTGCGGCCTCTATAGCGCTATGCTTGGAGCCG
CATTCTATATTCTCGTTTATTATGCAAGACAACACGATGCTGGCACCTGC
TCTCCCCGTCATCACGGACGATTTCCATTCCCTCAACGATATGGGATGGT
ACAGCTCAGTCTATTTACTGACCATGTGCGCCACGCAGATCCTCCACGGT
CGGCTTTGCACCATGTTCTCTATTAAATGGGTTTACATGATAAATCTGGT
AATCTTTGAAATCGGGTCCGTAGTGTCAGCGGCAACTCCCACCTCGGTTG
GCTTGATACTTGGACGGGCTATCACAGGAATAGGCGCGGCGGGACTTCTT
TCGGGCACCATCTTACTCATTGCTGCTAGTATGTCTTTGCAGTTGCAGGC
AACAGCTTTAGGTATTTTGGGAGGGTTGAAGGGTGCTGCAGCCGTGGCTG
GGCCATTATGTCGGTCTCTGCAGCAAATTCCCCCGGCGTTGAGGACAGGG
CTAGTGACACCGAGAAAATCGCGCACGAAACTCCCACCTACACGAGCGCA
CCGACAAAATGGCGCCAGATTGCGATACTATTGGCATTGTATCTGGTGAT
GTTTGCAGTTGCCCTGACGTCTGTTCCCCACAGCTTCCAATCTGGTTCCA
AGTAATCAAAGGTGTCTCCGCCGTACGGTCGGGAATCATGAACCTCCCCA
TGCTCGTATCGCTTATCGTGCTCTCCATTCCCAGCGGTGCCCTAGTCTCC
GCCATGGGGTACTACACTCCTACTATGATCATGGGCTGTATTCTGGTGCT
CATTAGCGCTGCCCTCATGACGACATTCACTCCGGACACGGGGACCGTAA
AATGGGCCGGATACCAAGTTATTATGGGCGCCGGGATTGGTATGGGCGCG
CAGCAAACCGTCCTCGCTATGCAGGCTTCGCTGCCCTCAGAAGACGTTCC
CGTTGGTACAGCACTTATGATATTCTATCAGACGCTGGGTGGTGCTGTCT
TCCTTATTGTGGCGCAGAATTTGTTTCAGCATGAGCTGGTGAAGAGATTG
ACAGGTAGGAATATTCCGGGTGTAGATGCGAGCAGTGTAGCCGCTGCGGG
AGCGACAGAGGTTAGGAACTTAGTGCCCCCGAAGTATTTGGGAGAGTCAT
TGGAGGCGTATAATGGTGCGGTGGTGAAGACGTTTTATATCTCGGTTGCG
TTGGCGGCGGTGGCGGTTTTAGCTACGTTTGTGCCAGAGTGGAAGTCGGT
TAAGACGGTGGCGAAGAGGGAAGAGCAGGAAAATATCGAGAGTGGAGGGA
ATGAGGTTGTGTAGATTGGGCGGGGCTTTCACGGACAAAGTCTCCTGGCG
ATGGTGCTTCTACATTAATCTCTCCCTGGGCGGAGTCGGCGCCGTGGCTA
TCCTTTTCCTATTCCATGCACCACCTCCTACCTTCGTCCCTGACGCTATG
AAGGGTAGCCCACTAAAGCAACGCCTCATCCAGCTCGATATTGAAGGCAC
GGTACTCTTCAGTGCAAGCATTATCTGCCTTCTCCTTGCTATCGAATGGG
GCGGGGCAAAATGGTCCTGGAGCAACGGGCGCATCGTCGCCCTGTTCGTG
ATCTTCGGCGTCACCTTAATTGTCTTCTGCATAGTGCAGAGCAGGAAGAA
AGAAATGGCAATGATCCCACCACGAGTAGCTGGGAACCGCAATGTCTGGA
GCTGCGGCCTCTATAGCGCTATGCTTGGAGCCGCATTCTATATTCTCGTT
TATTATGCAAGACAACACGATGCTGGCACCTGCTCTCCCCGTCATCACGG
ACGATTTCCATTCCCTCAACGATATGGGATGGTACAGCTCAGTCTATTTA
CTGACCATGTGCGCCACGCAGATCCTCCACGGTCGGCTTTGCACCATGTT
CTCTATTAAATGGGTTTACATGATAAATCTGGTAATCTTTGAAATCGGGT
CCGTAGTGTCAGCGGCAACTCCCACCTCGGTTGGCTTGATACTTGGACGG
GCTATCACAGGAATAGGCGCGGCGGGACTTCTTTCGGGCACCATCTTACT
CATTGCTGCTAGTATGTCTTTGCAGTTGCAGGCAACAGCTTTAGGTATTT
TGGGAGGGTTGAAGGGTGCTGCAGCCGTGGCTGGGCCATTATGTCGGTCT
CTGCAGCAAATTCCCCCGGCGTTGAGGACAGGGCTAGTGACACCGAGAAA
ATCGCGCACGAAACTCCCACCTACACGAGCGCACCGACAAAATGGCGCCA
GATTGCGATACTATTGGCATTGTATCTGGTGATGTTTGCAGTTGCCCTGA
CGTCTGTTCCCCACAGCTTCCAATCTGGTTCCAAGTAATCAAAGGTGTCT
CCGCCGTACGGTCGGGAATCATGAACCTCCCCATGCTCGTATCGCTTATC
GTGCTCTCCATTCCCAGCGGTGCCCTAGTCTCCGCCATGGGGTACTACAC
TCCTACTATGATCATGGGCTGTATTCTGGTGCTCATTAGCGCTGCCCTCA
TGACGACATTCACTCCGGACACGGGGACCGTAAAATGGGCCGGATACCAA
GTTATTATGGGCGCCGGGATTGGTATGGGCGCGCAGCAAACCGTCCTCGC
TATGCAGGCTTCGCTGCCCTCAGAAGACGTTCCCGTTGGTACAGCACTTA
TGATATTCTATCAGACGCTGGGTGGTGCTGTCTTCCTTATTGTGGCGCAG
AATTTGTTTCAGCATGAGCTGGTGAAGAGATTGACAGGTAGGAATATTCC
GGGTGTAGATGCGAGCAGTGTAGCCGCTGCGGGAGCGACAGAGGTTAGGA
ACTTAGTGCCCCCGAAGTATTTGGGAGAGTCATTGGAGGCGTATAATGGT
GCGGTGGTGAAGACGTTTTATATCTCGGTTGCGTTGGCGGCGGTGGCGGT
TTTAGCTACGTTTGTGCCAGAGTGGAAGTCGGTTAAGACGGTGGCGAAGA
GGGAAGAGCAGGAAAATATCGAGAGTGGAGGGAATGAGGTTGTGTAGATT
GGGCGGGGCTTTCACGGACAAAGTCTCCTGGCGATGGTGCTTCTACATTA
ATCTCTCCCTGGGCGGAGTCGGCGCCGTGGCTATCCTTTTCCTATTCCAT
GCACCACCTCCTACCTTCGTCCCTGACGCTATGAAGGGTAGCCCACTAAA
GCAACGCCTCATCCAGCTCGATATTGAAGGCACGGTACTCTTCAGTGCAA
GCATTATCTGCCTTCTCCTTGCTATCGAATGGGGCGGGGCAAAATGGTCC
TGGAGCAACGGGCGCATCGTCGCCCTGTTCGTGATCTTCGGCGTCACCTT
AATTGTCTTCTGCATAGTGCAGAGCAGGAAGAAAGAAATGGCAATGATCC
CACCACGAGTAGCTGGGAACCGCAATGTCTGGAGCTGCGGCCTCTATAGC
GCTATGCTTGGAGCCGCATTCTATATTCTCGTTTATTATGCAAGACAACA
CGATGCTGGCACCTGCTCTCCCCGTCATCACGGACGATTTCCATTCCCTC
AACGATATGGGATGGTACAGCTCAGTCTATTTACTGACCATGTGCGCCAC
GCAGATCCTCCACGGTCGGCTTTGCACCATGTTCTCTATTAAATGGGTTT
ACATGATAAATCTGGTAATCTTTGAAATCGGGTCCGTAGTGTCAGCGGCA
ACTCCCACCTCGGTTGGCTTGATACTTGGACGGGCTATCACAGGAATAGG
CGCGGCGGGACTTCTTTCGGGCACCATCTTACTCATTGCTGCTAGTATGT
CTTTGCAGTTGCAGGCAACAGCTTTAGGTATTTTGGGAGGGTTGAAGGGT
GCTGCAGCCGTGGCTGGGCCATTATGTCGGTCTCTGCAGCAAATTCCCCC
GGCGTTGAGGACAGGGCTAGTGACACCGAGAAAATCGCGCACGAAACTCC
CACCTACACGAGCGCACCGACAAAATGGCGCCAGATTGCGATACTATTGG
CATTGTATCTGGTGATGTTTGCAGTTGCCCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000224ATCC10864_000224Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000224-T1ATCC10864_000224-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000224-T1.cdsATCC10864_000224-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000224-T1.exon4ATCC10864_000224-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_000224-T1.exon3ATCC10864_000224-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000224-T1.exon2ATCC10864_000224-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000224-T1.exon1ATCC10864_000224-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
NoteantiSMASH:Cluster_1000006.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:617137..619034 -
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