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ATCC10864_000233-T1, ATCC10864_000233-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000233-T1
Unique NameATCC10864_000233-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:648926..651139+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000233-T1 ID=ATCC10864_000233-T1|Name=ATCC10864_000233-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2214bp|location=Sequence derived from alignment at MCQH01000006:648926..651139+ (Aspergillus niger ATCC 10864)
ATGCGCCTTCTGTCCGCAAGGCGCTCCGCAACAGGGAATCTCAACATCGA
ACTCGAAGAATTTCCCGATGTACCATCTGAGCAGTACGCCATCCTCTCAC
ACACATGGGAGAGGGAGGAGGTCAGCCTCAATGATTTAAACTCTGGCCTT
GCTGAGAATAAACAAGGTTTTCAGAAGATAAAAAACTGCTGTGCCAAAGC
ATTAGATGATGGATTCAGATACACCTGGATCGACACCTGCTGTATCGATA
AAACTAGCAGCGCTGAGCTATCCGAGGCGATTAACTCAATGTATCGATGG
TATCAGGAATCTAGTATATGCTATGTATATCTTGCCGATGTTCAGTCGCG
ATGTGACATATCGAGTAGTCGGTGGTTTACAAGAGGATGGACGCTTCAGG
AATTGATTGCCCCACCAAGAATGATATTCCTGAATAAAGATTGGAAAGAG
TTTGGGACCAAAAGGAATATGCATGGTCTCCTATCCCAGATCACTGGCAT
TCCAAGTGACATTCTCACAGGCACTAAGGACCTTGAAAGTATCAGCATTG
CGCAAAGAATGTCATGGGCTGCACGACGGGTTACAACCAGAGTTGAAGAC
CAAGCATACTCTCTTTTGGGGATTTTTGGTATTAACATGCCTTTAATTTA
CGGAGAAGAAAAGAGATCCTTTATTCGCCTTCAAGAGGAGATCTTGAGAG
TGAATGACGACCAGAGCATTTTTGCTTGGAAATCTCCTGAAGAGTACCGC
GGCGGGCTATTTGCAAGCTCCCCGCGTGCGTTCAAGGACTCAGCCAGCAT
TGTCCCACACAACGCTTTTACCACCTTGGACAAGCCAGTTACACAAAGCA
ATAAAGGGGTTCACTTGGAGCTTCGTCTAATTGGCAAGGCACCGGGACTG
GCCCTAGCTATCCTTAACTGTATCGACCGTGCGAACAGCAATCTTCCGAT
TGCGATTTACCTCAGAGACTTGTTCATGACCATGGAGCGGTTTGAAAGGG
TCAGGTGCACAGAACTTGCCTATGTGGATCTACGGGGATACAAATTCTCA
CAATATCCAATGAGAATGATTTGTGTCAAGCAACGCCGGCAGGCAGATCT
AAAGCAAAAGACTGTGTCAGATGTTGAACCCGACTTCTCTGATATGAGGC
CACTAGATGGCATACTGGATAGCCTGCCTGATGTCAAGATGAATTCGATG
GATAAGAATCGAGAAATACTTGGTTCACTCACAGAAAGAGGAGATTTTGA
TGCGGTATGGCTGCTGCTGACTTGGAGTGATTTTGATCCAGAGCGAAAGG
ACTCTCAAGGGAAATCACTGTTATCACAAGCAGCAAAACATGGCCACGTT
CCCATAGTGAAACTTTTACTAGCTCGAGGCAACGTTGAGTTTGATTCCTG
TGACCAAGAAAATCGAACCCCTCTTTCCTTTGCTGCATCAGCTGGCCATG
TCTCTGTCATCCAGATACTACTAGAGACCAATAAAGTGAGAATTGACTCA
AGAGATAATCAAGGCCTAACTCCTCTGGCCTGGGCAGCCAAAAACGGCCA
TGAGAAAGCAGTCCAATCACTACTTGAAAATGGTGCCTACATTGAGTCAG
AAGATGATTGGGGATGGACACCGTTGCTCTGTGCAGCCTGGTACGGGAGG
TCAACGGTAGTCAGTTGCCTCTTAGCGGAAGGCGCTGATTCAGAAGCAAG
AGACAACAATTGTGGCTGGACCCCATTGTTGTGTGGGGCCGTGAATGGCC
ACGATGATGTGGTGCAACAGCTTTTGGCCAAGAATGTCAATCTTGCGGCG
GAAGATAAGGACTATGGCTGGACATCACTGTCTTGGGCAGCTGTAAATGG
TCATTATGAAGTGGTACGGCAGTTGCTCGCAAAGGGTGCGAACATTAACA
CAAAGGACTCTCATCTGGGCCGTACACCATTGTCCTTGGCGGCGGGAAAT
GGCCATGACAAGATCGTACAACTTCTAGTAAGCAAGGACGCTGATATTGA
GTCCAAGGATTGTTATTCTGGCCGGACACCACTTGCATGGGCAGCTGGGA
ATGGTCATCAAGCCGTAGTACAGCGGCTAATGGTGGCAGGTGCCGATACA
CAGTCTAAAGATGATCAATATCACCGGACACCGGCACAATGGGCCGCTTG
CAACGGTCATGAGGCGGTGGCACGGCTATTCCCTCCTGCTCCCGTTCCAA
AGCCTGAAGAATAG
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Coding sequence (CDS) from alignment at MCQH01000006:648926..651139+

>ATCC10864_000233-T1 ID=ATCC10864_000233-T1|Name=ATCC10864_000233-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2214bp|location=Sequence derived from alignment at MCQH01000006:648926..651139+ (Aspergillus niger ATCC 10864)
ATGCGCCTTCTGTCCGCAAGGCGCTCCGCAACAGGGAATCTCAACATCGA
ACTCGAAGAATTTCCCGATGTACCATCTGAGCAGTACGCCATCCTCTCAC
ACACATGGGAGAGGGAGGAGGTCAGCCTCAATGATTTAAACTCTGGCCTT
GCTGAGAATAAACAAGGTTTTCAGAAGATAAAAAACTGCTGTGCCAAAGC
ATTAGATGATGGATTCAGATACACCTGGATCGACACCTGCTGTATCGATA
AAACTAGCAGCGCTGAGCTATCCGAGGCGATTAACTCAATGTATCGATGG
TATCAGGAATCTAGTATATGCTATGTATATCTTGCCGATGTTCAGTCGCG
ATGTGACATATCGAGTAGTCGGTGGTTTACAAGAGGATGGACGCTTCAGG
AATTGATTGCCCCACCAAGAATGATATTCCTGAATAAAGATTGGAAAGAG
TTTGGGACCAAAAGGAATATGCATGGTCTCCTATCCCAGATCACTGGCAT
TCCAAGTGACATTCTCACAGGCACTAAGGACCTTGAAAGTATCAGCATTG
CGCAAAGAATGTCATGGGCTGCACGACGGGTTACAACCAGAGTTGAAGAC
CAAGCATACTCTCTTTTGGGGATTTTTGGTATTAACATGCCTTTAATTTA
CGGAGAAGAAAAGAGATCCTTTATTCGCCTTCAAGAGGAGATCTTGAGAG
TGAATGACGACCAGAGCATTTTTGCTTGGAAATCTCCTGAAGAGTACCGC
GGCGGGCTATTTGCAAGCTCCCCGCGTGCGTTCAAGGACTCAGCCAGCAT
TGTCCCACACAACGCTTTTACCACCTTGGACAAGCCAGTTACACAAAGCA
ATAAAGGGGTTCACTTGGAGCTTCGTCTAATTGGCAAGGCACCGGGACTG
GCCCTAGCTATCCTTAACTGTATCGACCGTGCGAACAGCAATCTTCCGAT
TGCGATTTACCTCAGAGACTTGTTCATGACCATGGAGCGGTTTGAAAGGG
TCAGGTGCACAGAACTTGCCTATGTGGATCTACGGGGATACAAATTCTCA
CAATATCCAATGAGAATGATTTGTGTCAAGCAACGCCGGCAGGCAGATCT
AAAGCAAAAGACTGTGTCAGATGTTGAACCCGACTTCTCTGATATGAGGC
CACTAGATGGCATACTGGATAGCCTGCCTGATGTCAAGATGAATTCGATG
GATAAGAATCGAGAAATACTTGGTTCACTCACAGAAAGAGGAGATTTTGA
TGCGGTATGGCTGCTGCTGACTTGGAGTGATTTTGATCCAGAGCGAAAGG
ACTCTCAAGGGAAATCACTGTTATCACAAGCAGCAAAACATGGCCACGTT
CCCATAGTGAAACTTTTACTAGCTCGAGGCAACGTTGAGTTTGATTCCTG
TGACCAAGAAAATCGAACCCCTCTTTCCTTTGCTGCATCAGCTGGCCATG
TCTCTGTCATCCAGATACTACTAGAGACCAATAAAGTGAGAATTGACTCA
AGAGATAATCAAGGCCTAACTCCTCTGGCCTGGGCAGCCAAAAACGGCCA
TGAGAAAGCAGTCCAATCACTACTTGAAAATGGTGCCTACATTGAGTCAG
AAGATGATTGGGGATGGACACCGTTGCTCTGTGCAGCCTGGTACGGGAGG
TCAACGGTAGTCAGTTGCCTCTTAGCGGAAGGCGCTGATTCAGAAGCAAG
AGACAACAATTGTGGCTGGACCCCATTGTTGTGTGGGGCCGTGAATGGCC
ACGATGATGTGGTGCAACAGCTTTTGGCCAAGAATGTCAATCTTGCGGCG
GAAGATAAGGACTATGGCTGGACATCACTGTCTTGGGCAGCTGTAAATGG
TCATTATGAAGTGGTACGGCAGTTGCTCGCAAAGGGTGCGAACATTAACA
CAAAGGACTCTCATCTGGGCCGTACACCATTGTCCTTGGCGGCGGGAAAT
GGCCATGACAAGATCGTACAACTTCTAGTAAGCAAGGACGCTGATATTGA
GTCCAAGGATTGTTATTCTGGCCGGACACCACTTGCATGGGCAGCTGGGA
ATGGTCATCAAGCCGTAGTACAGCGGCTAATGGTGGCAGGTGCCGATACA
CAGTCTAAAGATGATCAATATCACCGGACACCGGCACAATGGGCCGCTTG
CAACGGTCATGAGGCGGTGGCACGGCTATTCCCTCCTGCTCCCGTTCCAA
AGCCTGAAGAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000233ATCC10864_000233Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000233-T1.exon1ATCC10864_000233-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000233-T1.cdsATCC10864_000233-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000233-T1ATCC10864_000233-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF12796
PFAMPF06985
PFAMPF13637
InterProIPR010730
PFAMPF13606
PFAMPF00023
InterProIPR020683
InterProIPR036770
PFAMPF13857
InterProIPR002110
Properties
Property NameValue
NoteantiSMASH:Cluster_1000006.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:648926..651139 +
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