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ATCC10864_000789-T1, ATCC10864_000789-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000789-T1
Unique NameATCC10864_000789-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000016:18245..20763-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000789-T1 ID=ATCC10864_000789-T1|Name=ATCC10864_000789-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2519bp|location=Sequence derived from alignment at MCQH01000016:18245..20763- (Aspergillus niger ATCC 10864)
ATGCCAATCAAACGCAAAGCTACGGATAGCGGTCGGTCAAGTAGAGCGTC
GAAACGGCCCACACCTGTGCCGGATATCGGTAGTAGTGATGAATACTCAG
ACTACGAGGAAGAAGTCAAGGATGATAACCTGAAAGGTAGCGTAGAAGTG
GAGTCTCGTTCATATGGGGTCTGCTTGCTGACATCTTCTGCTTGCAAGGT
GTCTTGGAGAAATTCTCTCTCGAATCTTTTAGCAACAAGAAGAGCGCCGC
CGTACAGAGACAGGACCCCGATTTCGGTTACAAGGACTTTTCCTCGCTAT
CGTTGAAACCCGATCATGCGAACCGCCCGCTCTGGATCGATCCTCTTAAG
GGAACTATTACCTTGGAGAGTTTCTCCCCTCTGGCACCCCAGGCGCAGGA
CTTCCTGACTACTATCGCCGAACCGCTGTCGCGTCCGACCCATCTGCACG
AATACCGATTGACAGGGAACAGTTTGTATGCGGCTGTCTCAGTGGGTTTG
CTGCCCCAGGATATCATCAACTTTCTGGATCGATTGTCGAAAACGCCGCT
TCCGGATACCATCAAGTCGTTCATTCTCGACTTCACGAAATCGTACGGAA
AGATCAAGGTCGTGCTGAAACATAATCGCTTCTTCGTGGAAAGTACCGAT
CCGGCGATGTTGCAGATGCTGCTGCAGGATGAAGTTATTGGTTCTCAGAG
ATTGAAAGGCACGGAGGGCATTATTCAGCAGGCGGCTCCGAAAATGGGCG
GCCTGGTCATTCCGGGTACAAAGGATGCAGCGGGTGTCAGGCAGGCTTCG
GAGCAGAAGCCGGCGGAAGACGGTGCAGGCGAGGCTCGTAAAGAGGACGA
TATCCTGCTGGCTATTCGCGACGATGATGACGACGAGGAGGAAGTTCAAG
TGCACAGTTTCGAAATTCCCAACGAAGCAGTCGAACCCGTCAAGGCGCGC
TGTCAGGCTATGGGCTGTCCAGCACTGGAGGAGTATGATTTCCGAAATGA
TGAGATCAATCCCACCTTGGATATCGACTTGAAGCCGGCGGCACGAATTC
GAAGCTACCAAGAAAAGAGTTTGAGTAAGATGTTCGGTAACGGACGTGCG
AAGAGTGGAATTATCGTCTTGCCTTGCGGTGCTGGAAAAACGCTGGTGGG
TATCACGGCGGGCTGCACGATCAAGAAGGGGACAATTGTCTTGTGTACCA
GTTCTATGTCTGTGGTGCAATGGCGTAACGAGTTCTTGCGCTGGTCCAAC
ATTGATCCCGGTGATATTGCCGTTTTCACATCAGACAACAAGGAGAAATT
CCGTCGATCGACTGGTATCATCGTGTCAACTTACTCCATGGTGTCCCAGA
CGCGTGCTCGGTCGCATGATGCGCAGAAGATGATGGATTGGATCCAGTCA
CGAGAATGGGGTCTGATGATTCTTGATGAGGTGCACGTCGTGCCTGCATC
GATGTTCCGAAAAGTCACATCGGCAATTGCGTGTCAGAGTAAACTGGGAT
TGACGGCAACGCTGCTGCGAGAGGATGACAAGATCAAGGATCTGAACTTT
TTGATTGGTCCCAAATTGTACGAAGCCAACTGGATGGAACTGGCCGAGCA
AGGGCACATTGCCAAGGTTCAGTGCGCCGAGGTATGGTGTCCGATGACGA
CCGAATTCTACTCCGAGTACATGAGAGAAAAGTCACGAAAGGCTGCTCTT
CTATACATTATGAACCCTCGGAAATTCCAAGCATGCCAGTTCCTGATCGA
CTACCATGAGAAGCGAGGTGACAAGGTCATTGTCTTTTCCGACAACGTCT
ACGCTCTCCAGCGGTATGCACTCAAGCTGAACAAGGCCTATATCTACGGC
GGTACTCCACAGAACGAGCGAATGCGCATTTTGGAGAACTTCCAGCACAA
TGAACAAGTCAATACCATCTTCCTCTCCAAGATCGGAGACACGTCGCTCG
ATCTACCGGAAGCCACCTGTCTGATCCAGATCTCGTCGCACTACGGTTCC
CGTCGTCAGGAAGCCCAACGACTTGGTCGGATTCTGCGAGCCAAGCGTCG
AAACGACGAGGGATTCAACGCCTTCTTCTACTCGCTTGTGTCGAAAGACA
CAGATGAAATGTTTTATTCTTCCAAGCGACAGGCTTTCCTTGTCGACCAG
GGCTACGCGTTCAAGGTCATTACTCACCTGCAAGGCATCGAGAACCTGGA
AGGGTTGGCGTACGCCACGCCCAGCGAACGCCGCGAGCTGCTGCAGGAGG
TGATGTTACAGAACGAGACTTCTGCCGAGGTCGAGCACGTCACGGACGAT
CTCTTCTCAGGACGTTCGGGCGGCCAGCGAAAGGGAGCAGTCAAGCGCAG
TGCCGCGACACTCAGCGGCCTGGCCGGCGGTGAAGACATGGCGTATATCG
AGTACAACAAGAGCCGGAACAAGCAGCTGAAGGACAAGGTGGGCCATCAC
CCGCTGTTCCGGAAGCTGGAGCGGGAACGACTCAAGCGGAAGAAGGAGTT
GGAGGATTTCATGCGGTAG
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Coding sequence (CDS) from alignment at MCQH01000016:18245..20763-

>ATCC10864_000789-T1 ID=ATCC10864_000789-T1|Name=ATCC10864_000789-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4914bp|location=Sequence derived from alignment at MCQH01000016:18245..20763- (Aspergillus niger ATCC 10864)
GTGTCTTGGAGAAATTCTCTCTCGAATCTTTTAGCAACAAGAAGAGCGCC
GCCGTACAGAGACAGGACCCCGATTTCGGTTACAAGGACTTTTCCTCGCT
ATCGTTGAAACCCGATCATGCGAACCGCCCGCTCTGGATCGATCCTCTTA
AGGGAACTATTACCTTGGAGAGTTTCTCCCCTCTGGCACCCCAGGCGCAG
GACTTCCTGACTACTATCGCCGAACCGCTGTCGCGTCCGACCCATCTGCA
CGAATACCGATTGACAGGGAACAGTTTGTATGCGGCTGTCTCAGTGGGTT
TGCTGCCCCAGGATATCATCAACTTTCTGGATCGATTGTCGAAAACGCCG
CTTCCGGATACCATCAAGTCGTTCATTCTCGACTTCACGAAATCGTACGG
AAAGATCAAGGTCGTGCTGAAACATAATCGCTTCTTCGTGGAAAGTACCG
ATCCGGCGATGTTGCAGATGCTGCTGCAGGATGAAGTTATTGGTTCTCAG
AGATTGAAAGGCACGGAGGGCATTATTCAGCAGGCGGCTCCGAAAATGGG
CGGCCTGGTCATTCCGGGTACAAAGGATGCAGCGGGTGTCAGGCAGGCTT
CGGAGCAGAAGCCGGCGGAAGACGGTGCAGGCGAGGCTCGTAAAGAGGAC
GATATCCTGCTGGCTATTCGCGACGATGATGACGACGAGGAGGAAGTTCA
AGTGCACAGTTTCGAAATTCCCAACGAAGCAGTCGAACCCGTCAAGGCGC
GCTGTCAGGCTATGGGCTGTCCAGCACTGGAGGAGTATGATTTCCGAAAT
GATGAGATCAATCCCACCTTGGATATCGACTTGAAGCCGGCGGCACGAAT
TCGAAGCTACCAAGAAAAGAGTTTGAGTAAGATGTTCGGTAACGGACGTG
CGAAGAGTGGAATTATCGTCTTGCCTTGCGGTGCTGGAAAAACGCTGGTG
GGTATCACGGCGGGCTGCACGATCAAGAAGGGGACAATTGTCTTGTGTAC
CAGTTCTATGTCTGTGGTGCAATGGCGTAACGAGTTCTTGCGCTGGTCCA
ACATTGATCCCGGTGATATTGCCGTTTTCACATCAGACAACAAGGAGAAA
TTCCGTCGATCGACTGGTATCATCGTGTCAACTTACTCCATGGTGTCCCA
GACGCGTGCTCGGTCGCATGATGCGCAGAAGATGATGGATTGGATCCAGT
CACGAGAATGGGGTCTGATGATTCTTGATGAGGTGCACGTCGTGCCTGCA
TCGATGTTCCGAAAAGTCACATCGGCAATTGCGTGTCAGAGTAAACTGGG
ATTGACGGCAACGCTGCTGCGAGAGGATGACAAGATCAAGGATCTGAACT
TTTTGATTGGTCCCAAATTGTACGAAGCCAACTGGATGGAACTGGCCGAG
CAAGGGCACATTGCCAAGGTTCAGTGCGCCGAGGTATGGTGTCCGATGAC
GACCGAATTCTACTCCGAGTACATGAGAGAAAAGTCACGAAAGGCTGCTC
TTCTATACATTATGAACCCTCGGAAATTCCAAGCATGCCAGTTCCTGATC
GACTACCATGAGAAGCGAGGTGACAAGGTCATTGTCTTTTCCGACAACGT
CTACGCTCTCCAGCGGTATGCACTCAAGCTGAACAAGGCCTATATCTACG
GCGGTACTCCACAGAACGAGCGAATGCGCATTTTGGAGAACTTCCAGCAC
AATGAACAAGTCAATACCATCTTCCTCTCCAAGATCGGAGACACGTCGCT
CGATCTACCGGAAGCCACCTGTCTGATCCAGATCTCGTCGCACTACGGTT
CCCGTCGTCAGGAAGCCCAACGACTTGGTCGGATTCTGCGAGCCAAGCGT
CGAAACGACGAGGGATTCAACGCCTTCTTCTACTCGCTTGTGTCGAAAGA
CACAGATGAAATGTTTTATTCTTCCAAGCGACAGGCTTTCCTTGTCGACC
AGGGCTACGCGTTCAAGGTCATTACTCACCTGCAAGGCATCGAGAACCTG
GAAGGGTTGGCGTACGCCACGCCCAGCGAACGCCGCGAGCTGCTGCAGGA
GGTGATGTTACAGAACGAGACTTCTGCCGAGGTCGAGCACGTCACGGACG
ATCTCTTCTCAGGACGTTCGGGCGGCCAGCGAAAGGGAGCAGTCAAGCGC
AGTGCCGCGACACTCAGCGGCCTGGCCGGCGGTGAAGACATGGCGTATAT
CGAGTACAACAAGAGCCGGAACAAGCAGCTGAAGGACAAGGTGGGCCATC
ACCCGCTGTTCCGGAAGCTGGAGCGGGAACGACTCAAGCGGAAGAAGGAG
TTGGAGGATTTCATGCGGTAGATGCCAATCAAACGCAAAGCTACGGATAG
CGGTCGGTCAAGTAGAGCGTCGAAACGGCCCACACCTGTGCCGGATATCG
GTAGTAGTGATGAATACTCAGACTACGAGGAAGAAGTCAAGGATGATAAC
CTGAAAGGTGTCTTGGAGAAATTCTCTCTCGAATCTTTTAGCAACAAGAA
GAGCGCCGCCGTACAGAGACAGGACCCCGATTTCGGTTACAAGGACTTTT
CCTCGCTATCGTTGAAACCCGATCATGCGAACCGCCCGCTCTGGATCGAT
CCTCTTAAGGGAACTATTACCTTGGAGAGTTTCTCCCCTCTGGCACCCCA
GGCGCAGGACTTCCTGACTACTATCGCCGAACCGCTGTCGCGTCCGACCC
ATCTGCACGAATACCGATTGACAGGGAACAGTTTGTATGCGGCTGTCTCA
GTGGGTTTGCTGCCCCAGGATATCATCAACTTTCTGGATCGATTGTCGAA
AACGCCGCTTCCGGATACCATCAAGTCGTTCATTCTCGACTTCACGAAAT
CGTACGGAAAGATCAAGGTCGTGCTGAAACATAATCGCTTCTTCGTGGAA
AGTACCGATCCGGCGATGTTGCAGATGCTGCTGCAGGATGAAGTTATTGG
TTCTCAGAGATTGAAAGGCACGGAGGGCATTATTCAGCAGGCGGCTCCGA
AAATGGGCGGCCTGGTCATTCCGGGTACAAAGGATGCAGCGGGTGTCAGG
CAGGCTTCGGAGCAGAAGCCGGCGGAAGACGGTGCAGGCGAGGCTCGTAA
AGAGGACGATATCCTGCTGGCTATTCGCGACGATGATGACGACGAGGAGG
AAGTTCAAGTGCACAGTTTCGAAATTCCCAACGAAGCAGTCGAACCCGTC
AAGGCGCGCTGTCAGGCTATGGGCTGTCCAGCACTGGAGGAGTATGATTT
CCGAAATGATGAGATCAATCCCACCTTGGATATCGACTTGAAGCCGGCGG
CACGAATTCGAAGCTACCAAGAAAAGAGTTTGAGTAAGATGTTCGGTAAC
GGACGTGCGAAGAGTGGAATTATCGTCTTGCCTTGCGGTGCTGGAAAAAC
GCTGGTGGGTATCACGGCGGGCTGCACGATCAAGAAGGGGACAATTGTCT
TGTGTACCAGTTCTATGTCTGTGGTGCAATGGCGTAACGAGTTCTTGCGC
TGGTCCAACATTGATCCCGGTGATATTGCCGTTTTCACATCAGACAACAA
GGAGAAATTCCGTCGATCGACTGGTATCATCGTGTCAACTTACTCCATGG
TGTCCCAGACGCGTGCTCGGTCGCATGATGCGCAGAAGATGATGGATTGG
ATCCAGTCACGAGAATGGGGTCTGATGATTCTTGATGAGGTGCACGTCGT
GCCTGCATCGATGTTCCGAAAAGTCACATCGGCAATTGCGTGTCAGAGTA
AACTGGGATTGACGGCAACGCTGCTGCGAGAGGATGACAAGATCAAGGAT
CTGAACTTTTTGATTGGTCCCAAATTGTACGAAGCCAACTGGATGGAACT
GGCCGAGCAAGGGCACATTGCCAAGGTTCAGTGCGCCGAGGTATGGTGTC
CGATGACGACCGAATTCTACTCCGAGTACATGAGAGAAAAGTCACGAAAG
GCTGCTCTTCTATACATTATGAACCCTCGGAAATTCCAAGCATGCCAGTT
CCTGATCGACTACCATGAGAAGCGAGGTGACAAGGTCATTGTCTTTTCCG
ACAACGTCTACGCTCTCCAGCGGTATGCACTCAAGCTGAACAAGGCCTAT
ATCTACGGCGGTACTCCACAGAACGAGCGAATGCGCATTTTGGAGAACTT
CCAGCACAATGAACAAGTCAATACCATCTTCCTCTCCAAGATCGGAGACA
CGTCGCTCGATCTACCGGAAGCCACCTGTCTGATCCAGATCTCGTCGCAC
TACGGTTCCCGTCGTCAGGAAGCCCAACGACTTGGTCGGATTCTGCGAGC
CAAGCGTCGAAACGACGAGGGATTCAACGCCTTCTTCTACTCGCTTGTGT
CGAAAGACACAGATGAAATGTTTTATTCTTCCAAGCGACAGGCTTTCCTT
GTCGACCAGGGCTACGCGTTCAAGGTCATTACTCACCTGCAAGGCATCGA
GAACCTGGAAGGGTTGGCGTACGCCACGCCCAGCGAACGCCGCGAGCTGC
TGCAGGAGGTGATGTTACAGAACGAGACTTCTGCCGAGGTCGAGCACGTC
ACGGACGATCTCTTCTCAGGACGTTCGGGCGGCCAGCGAAAGGGAGCAGT
CAAGCGCAGTGCCGCGACACTCAGCGGCCTGGCCGGCGGTGAAGACATGG
CGTATATCGAGTACAACAAGAGCCGGAACAAGCAGCTGAAGGACAAGGTG
GGCCATCACCCGCTGTTCCGGAAGCTGGAGCGGGAACGACTCAAGCGGAA
GAAGGAGTTGGAGGATTTCATGCGGTAGATGCCAATCAAACGCAAAGCTA
CGGATAGCGGTCGGTCAAGTAGAGCGTCGAAACGGCCCACACCTGTGCCG
GATATCGGTAGTAGTGATGAATACTCAGACTACGAGGAAGAAGTCAAGGA
TGATAACCTGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003677DNA binding
GO:0005524ATP binding
GO:0003678DNA helicase activity
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
GO:0006289nucleotide-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SSL2ATCC10864_000789Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000789-T1ATCC10864_000789-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000789-T1.cdsATCC10864_000789-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000789-T1.exon2ATCC10864_000789-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000789-T1.exon1ATCC10864_000789-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001161
InterProIPR027417
PFAMPF13625
PFAMPF00271
InterProIPR006935
InterProIPR032830
PFAMPF04851
InterProIPR001650
PFAMPF16203
InterProIPR032438
InterProIPR014001
Properties
Property NameValue
NoteBUSCO:EOG09260HSP
ProductDNA repair helicase RAD25
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000016supercontigMCQH01000016:18245..20763 -
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