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ATCC10864_001185-T1, ATCC10864_001185-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001185-T1
Unique NameATCC10864_001185-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:1154053..1155752-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001185-T1 ID=ATCC10864_001185-T1|Name=ATCC10864_001185-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1700bp|location=Sequence derived from alignment at MCQH01000019:1154053..1155752- (Aspergillus niger ATCC 10864)
ATGCCCAAACGCTCCCGCCCACCACCACCAACAGCCACCCCCGGACCAAG
CGGAAGAAACAGAAACAGAGACAGAGACACCACCCCCCCTCTTCCCCCCT
ACCAACCCCCCACCAGCACCCTGACGACCCTATCCCACCAACCGACCACC
GCACCCGCCCTCTCCGCCCTCCTCGCAACGCACACCTCCTCCACCCTAAA
AACGCACCTCCAGCACGCGCAAGAGAAACTCACCGACGCCGCAGGCGAGA
TCAACGAGCGGCTCACAGACGCGAAAGAGAGGAGTAAGAAATCGCGGGAG
AGGAGGAGGAATATACGTTCTCATACTTTGGAGAATAATAATAATAATGG
TGAGGGGGTAGATGAGGAAGGGGGGGATAGTGAGGACGAGGGGATTGAAG
AGTTCGAGGAGAGAGTGGCTCAGACGACGAAGGTATTGGAGGAGACTATT
CGGGGGGTTATTGATGCGGAAGTGAGGGGGGAGGAGCTTGGGAGGGTTAT
CTCGGGATTGGAGGGCGGGGTTGCTGAACGGGTGAGGGTTAGGGGTGTGA
GGAGGAGTCAGAGAGGAATTGGGAGAAGGTTGAGGGGGCATCATGGTGAG
GATGAGGAGGATGAGGATGGGGAGGAAGGGGTGGATGTGGATGTCGATGA
AGATGAGGAGGGCGCGGTGCCGTTCCTGGCGCAGTTCGAGGATGAGCTGC
GCGGGAAGATGGAGGAGTATGAAGGGTTGAGTTTGACGAGACGGTATGTA
TATCCCCATTTCTATCCCAATAATATTTTACTTCCAGGTTTATTTACTAA
CGGAATCATGGTGGTAGGTATTCTACGAACAACTCCTACATAGGTTTCTA
CAAAATCATCCACGAAGCCAAACACATCGGCGACGAAATCCCCCCTCCGC
CTCATCCGTCGACGTGGTTCGCTCACTTGGAAGATCCTCATTCTCAATCT
CAACCACAATCTCATCCATCTGCCTCTACCTCTACTTCAACCACTACCAC
CAGACAAACTAGACCCACCCGCGCTCGACCTCAACCCCCCTCCGAAGAAG
AAGATGAAGATGATGATGACGAAATCGCCATCCAAACTGAACGCATATCG
CTGAAATGCCCCCTCACACTCCTTCCCTTCCGCGACCCCGTGACCAGCAC
GAAATGCCCACACAGTTTCGAGCGCGAGGCGATATTCACCATGATTAGCG
GGAGTAATCAGATGGTGCCTGATCCGAGGGGGTCATCTGGAACTGGAAGA
GCGAAGCGCGTGCGCAGCGTCAAGTGTCCTGTGTGCGAGGTGCAGTTGAC
GGAGTTTGATCTGCGGAGTGATCCTGTGCTGATGAGGCGGGTGAAGAGGG
CGGAGATGGCGGAGTTGAGGAGGAGGGAGAGGGAGATGTTGGATGATGGG
GAAGATGATCAGGATGGTGGTGACGGGGGTGGTGGTGGGGGGAAGAGGAA
GAGGAGTGGGAGGAGGAGGGGGAGTGCGGTTGAGGTTGATGATGGTGATA
GTGATGATGATAGTGGTGAGGGTGATGGGGTGGAGAGGATTCGGGTTAAG
AGGGAGAGAGGGATGTCTGTTGCTGCTAGGATTAAGCAGGAGAGGGCGGT
GTCGATGGTTGGGGATGGGGATGGGGATGTGGAGGAGGTTGATATGGATG
AAGAAGGGGGAGGGGAAGAGGGTGGGTATGATTCTATGTATGATGAGTGA
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Coding sequence (CDS) from alignment at MCQH01000019:1154053..1155752-

>ATCC10864_001185-T1 ID=ATCC10864_001185-T1|Name=ATCC10864_001185-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3252bp|location=Sequence derived from alignment at MCQH01000019:1154053..1155752- (Aspergillus niger ATCC 10864)
GTATTCTACGAACAACTCCTACATAGGTTTCTACAAAATCATCCACGAAG
CCAAACACATCGGCGACGAAATCCCCCCTCCGCCTCATCCGTCGACGTGG
TTCGCTCACTTGGAAGATCCTCATTCTCAATCTCAACCACAATCTCATCC
ATCTGCCTCTACCTCTACTTCAACCACTACCACCAGACAAACTAGACCCA
CCCGCGCTCGACCTCAACCCCCCTCCGAAGAAGAAGATGAAGATGATGAT
GACGAAATCGCCATCCAAACTGAACGCATATCGCTGAAATGCCCCCTCAC
ACTCCTTCCCTTCCGCGACCCCGTGACCAGCACGAAATGCCCACACAGTT
TCGAGCGCGAGGCGATATTCACCATGATTAGCGGGAGTAATCAGATGGTG
CCTGATCCGAGGGGGTCATCTGGAACTGGAAGAGCGAAGCGCGTGCGCAG
CGTCAAGTGTCCTGTGTGCGAGGTGCAGTTGACGGAGTTTGATCTGCGGA
GTGATCCTGTGCTGATGAGGCGGGTGAAGAGGGCGGAGATGGCGGAGTTG
AGGAGGAGGGAGAGGGAGATGTTGGATGATGGGGAAGATGATCAGGATGG
TGGTGACGGGGGTGGTGGTGGGGGGAAGAGGAAGAGGAGTGGGAGGAGGA
GGGGGAGTGCGGTTGAGGTTGATGATGGTGATAGTGATGATGATAGTGGT
GAGGGTGATGGGGTGGAGAGGATTCGGGTTAAGAGGGAGAGAGGGATGTC
TGTTGCTGCTAGGATTAAGCAGGAGAGGGCGGTGTCGATGGTTGGGGATG
GGGATGGGGATGTGGAGGAGGTTGATATGGATGAAGAAGGGGGAGGGGAA
GAGGGTGGGTATGATTCTATGTATGATGAGTGAATGCCCAAACGCTCCCG
CCCACCACCACCAACAGCCACCCCCGGACCAAGCGGAAGAAACAGAAACA
GAGACAGAGACACCACCCCCCCTCTTCCCCCCTACCAACCCCCCACCAGC
ACCCTGACGACCCTATCCCACCAACCGACCACCGCACCCGCCCTCTCCGC
CCTCCTCGCAACGCACACCTCCTCCACCCTAAAAACGCACCTCCAGCACG
CGCAAGAGAAACTCACCGACGCCGCAGGCGAGATCAACGAGCGGCTCACA
GACGCGAAAGAGAGGAGTAAGAAATCGCGGGAGAGGAGGAGGAATATACG
TTCTCATACTTTGGAGAATAATAATAATAATGGTGAGGGGGTAGATGAGG
AAGGGGGGGATAGTGAGGACGAGGGGATTGAAGAGTTCGAGGAGAGAGTG
GCTCAGACGACGAAGGTATTGGAGGAGACTATTCGGGGGGTTATTGATGC
GGAAGTGAGGGGGGAGGAGCTTGGGAGGGTTATCTCGGGATTGGAGGGCG
GGGTTGCTGAACGGGTGAGGGTTAGGGGTGTGAGGAGGAGTCAGAGAGGA
ATTGGGAGAAGGTTGAGGGGGCATCATGGTGAGGATGAGGAGGATGAGGA
TGGGGAGGAAGGGGTGGATGTGGATGTCGATGAAGATGAGGAGGGCGCGG
TGCCGTTCCTGGCGCAGTTCGAGGATGAGCTGCGCGGGAAGATGGAGGAG
TATGAAGGGTTGAGTTTGACGAGACGGTATTCTACGAACAACTCCTACAT
AGGTTTCTACAAAATCATCCACGAAGCCAAACACATCGGCGACGAAATCC
CCCCTCCGCCTCATCCGTCGACGTGGTTCGCTCACTTGGAAGATCCTCAT
TCTCAATCTCAACCACAATCTCATCCATCTGCCTCTACCTCTACTTCAAC
CACTACCACCAGACAAACTAGACCCACCCGCGCTCGACCTCAACCCCCCT
CCGAAGAAGAAGATGAAGATGATGATGACGAAATCGCCATCCAAACTGAA
CGCATATCGCTGAAATGCCCCCTCACACTCCTTCCCTTCCGCGACCCCGT
GACCAGCACGAAATGCCCACACAGTTTCGAGCGCGAGGCGATATTCACCA
TGATTAGCGGGAGTAATCAGATGGTGCCTGATCCGAGGGGGTCATCTGGA
ACTGGAAGAGCGAAGCGCGTGCGCAGCGTCAAGTGTCCTGTGTGCGAGGT
GCAGTTGACGGAGTTTGATCTGCGGAGTGATCCTGTGCTGATGAGGCGGG
TGAAGAGGGCGGAGATGGCGGAGTTGAGGAGGAGGGAGAGGGAGATGTTG
GATGATGGGGAAGATGATCAGGATGGTGGTGACGGGGGTGGTGGTGGGGG
GAAGAGGAAGAGGAGTGGGAGGAGGAGGGGGAGTGCGGTTGAGGTTGATG
ATGGTGATAGTGATGATGATAGTGGTGAGGGTGATGGGGTGGAGAGGATT
CGGGTTAAGAGGGAGAGAGGGATGTCTGTTGCTGCTAGGATTAAGCAGGA
GAGGGCGGTGTCGATGGTTGGGGATGGGGATGGGGATGTGGAGGAGGTTG
ATATGGATGAAGAAGGGGGAGGGGAAGAGGGTGGGTATGATTCTATGTAT
GATGAGTGAATGCCCAAACGCTCCCGCCCACCACCACCAACAGCCACCCC
CGGACCAAGCGGAAGAAACAGAAACAGAGACAGAGACACCACCCCCCCTC
TTCCCCCCTACCAACCCCCCACCAGCACCCTGACGACCCTATCCCACCAA
CCGACCACCGCACCCGCCCTCTCCGCCCTCCTCGCAACGCACACCTCCTC
CACCCTAAAAACGCACCTCCAGCACGCGCAAGAGAAACTCACCGACGCCG
CAGGCGAGATCAACGAGCGGCTCACAGACGCGAAAGAGAGGAGTAAGAAA
TCGCGGGAGAGGAGGAGGAATATACGTTCTCATACTTTGGAGAATAATAA
TAATAATGGTGAGGGGGTAGATGAGGAAGGGGGGGATAGTGAGGACGAGG
GGATTGAAGAGTTCGAGGAGAGAGTGGCTCAGACGACGAAGGTATTGGAG
GAGACTATTCGGGGGGTTATTGATGCGGAAGTGAGGGGGGAGGAGCTTGG
GAGGGTTATCTCGGGATTGGAGGGCGGGGTTGCTGAACGGGTGAGGGTTA
GGGGTGTGAGGAGGAGTCAGAGAGGAATTGGGAGAAGGTTGAGGGGGCAT
CATGGTGAGGATGAGGAGGATGAGGATGGGGAGGAAGGGGTGGATGTGGA
TGTCGATGAAGATGAGGAGGGCGCGGTGCCGTTCCTGGCGCAGTTCGAGG
ATGAGCTGCGCGGGAAGATGGAGGAGTATGAAGGGTTGAGTTTGACGAGA
CG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000724double-strand break repair via homologous recombination
Vocabulary: Cellular Component
TermDefinition
GO:0030915Smc5-Smc6 complex
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0019789SUMO transferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001185ATCC10864_001185Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001185-T1ATCC10864_001185-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001185-T1.cdsATCC10864_001185-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001185-T1.exon2ATCC10864_001185-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001185-T1.exon1ATCC10864_001185-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR026846
InterProIPR013083
PFAMPF11789
InterProIPR004181
Properties
Property NameValue
NoteantiSMASH:Cluster_1000019.5
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:1154053..1155752 -
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