You are here

Home

ATCC10864_001727-T1, ATCC10864_001727-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001727-T1
Unique NameATCC10864_001727-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000029:219636..220575+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001727-T1 ID=ATCC10864_001727-T1|Name=ATCC10864_001727-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=940bp|location=Sequence derived from alignment at MCQH01000029:219636..220575+ (Aspergillus niger ATCC 10864)
ATGTCTTCCGTCACGAGTTCCCACCGCCTTTCCGCGCGGAAGTCCGGCCA
TCGTTCCGCCGCAACTCCTGCTTCAATTTCCAACACACCTTCTGTCCGTC
CAGCCTCGCAACCTCTCCGTCGCTCTCTGCCATCGCAGCAGACTTCTAGG
GCTTCACCAGCCTCTTCCCGTCAGCCCAGCACTGGCCATGTGTCGAGTCA
GCTCGCTTCTGCTTGGCCGTTCAATCCCCAGGAAACAGAACTAATCCGCG
CCGGATACCGTCCCGCCTTCAAACCGAAACCCGTCGCCGCAGCGGACGAA
CAGTCCTCGACCAACAATAACAGCAATAGGAAAGGGCCCAATAAGAAGAA
GAATATGGCGGAACCACGAGCCCGTGCCGCTAGGCACAAGGGTCAGATGA
ACTTTGCATCTGAACGTACGTCTGTCGCCGTCGATTCTAGATCGATAGCT
AGATCTATAGTTCTGGTTGCTAACATGAACACACATATCAGTCCGCCTCC
TCCTTCTTGCCTATGGTGACCCCCGTCCGCACCCTTCGTTTCCCGCCGAG
CCACTCCCCGAAACCATCCGTGTTCTGGACGAGATTGTCACCGACTTCGT
TCTCGAAATGTGTCACGGTGCGGCCCAGTACGCCAGCTACTCCCGCCGGC
AGAAGATCAAGGTCGATGACTTCCGGTTTGCGCTGCGCCGGGATCCCAAC
AAGCTTGGTCGTGTGCAGGAACTTCTTCGCATGGAGCGTGAGCTGAAAGA
GGCCCGTAAGGCATTTGATCAGAATGACGATCAGGTCGGGAACTTGAAGG
ATGCGGGCAAGAAGGGCCTTGAGGAACTTGGCGAAAGTGTTGATGGGAAG
AAGAGTAAGGGCAAGGGGAAGAGAAATGCAAGAAGGGATTCGGATGCCAC
GGAGGATACGGCGCCGAAGAAGAGAAAAGTTGTGGGATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000029:219636..220575+

>ATCC10864_001727-T1 ID=ATCC10864_001727-T1|Name=ATCC10864_001727-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1728bp|location=Sequence derived from alignment at MCQH01000029:219636..220575+ (Aspergillus niger ATCC 10864)
ATGTCTTCCGTCACGAGTTCCCACCGCCTTTCCGCGCGGAAGTCCGGCCA
TCGTTCCGCCGCAACTCCTGCTTCAATTTCCAACACACCTTCTGTCCGTC
CAGCCTCGCAACCTCTCCGTCGCTCTCTGCCATCGCAGCAGACTTCTAGG
GCTTCACCAGCCTCTTCCCGTCAGCCCAGCACTGGCCATGTGTCGAGTCA
GCTCGCTTCTGCTTGGCCGTTCAATCCCCAGGAAACAGAACTAATCCGCG
CCGGATACCGTCCCGCCTTCAAACCGAAACCCGTCGCCGCAGCGGACGAA
CAGTCCTCGACCAACAATAACAGCAATAGGAAAGGGCCCAATAAGAAGAA
GAATATGGCGGAACCACGAGCCCGTGCCGCTAGGCACAAGGGTCAGATGA
ACTTTGCATCTGAACTCCGCCTCCTCCTTCTTGCCTATGGTGACCCCCGT
CCGCACCCTTCGTTTCCCGCCGAGCCACTCCCCGAAACCATCCGTGTTCT
GGACGAGATTGTCACCGACTTCGTTCTCGAAATGTGTCACGGTGCGGCCC
AGTACGCCAGCTACTCCCGCCGGCAGAAGATCAAGGTCGATGACTTCCGG
TTTGCGCTGCGCCGGGATCCCAACAAGCTTGGTCGTGTGCAGGAACTTCT
TCGCATGGAGCGTGAGCTGAAAGAGGCCCGTAAGGCATTTGATCAGAATG
ACGATCAGGTCGGGAACTTGAAGGATGCGGGCAAGAAGGGCCTTGAGGAA
CTTGGCGAAAGTGTTGATGGGAAGAAGAGTAAGGGCAAGGGGAAGAGAAA
TGCAAGAAGGGATTCGGATGCCACGGAGGATACGGCGCCGAAGAAGAGAA
AAGTTGTGGGATAAATGTCTTCCGTCACGAGTTCCCACCGCCTTTCCGCG
CGGAAGTCCGGCCATCGTTCCGCCGCAACTCCTGCTTCAATTTCCAACAC
ACCTTCTGTCCGTCCAGCCTCGCAACCTCTCCGTCGCTCTCTGCCATCGC
AGCAGACTTCTAGGGCTTCACCAGCCTCTTCCCGTCAGCCCAGCACTGGC
CATGTGTCGAGTCAGCTCGCTTCTGCTTGGCCGTTCAATCCCCAGGAAAC
AGAACTAATCCGCGCCGGATACCGTCCCGCCTTCAAACCGAAACCCGTCG
CCGCAGCGGACGAACAGTCCTCGACCAACAATAACAGCAATAGGAAAGGG
CCCAATAAGAAGAAGAATATGGCGGAACCACGAGCCCGTGCCGCTAGGCA
CAAGGGTCAGATGAACTTTGCATCTGAACTCCGCCTCCTCCTTCTTGCCT
ATGGTGACCCCCGTCCGCACCCTTCGTTTCCCGCCGAGCCACTCCCCGAA
ACCATCCGTGTTCTGGACGAGATTGTCACCGACTTCGTTCTCGAAATGTG
TCACGGTGCGGCCCAGTACGCCAGCTACTCCCGCCGGCAGAAGATCAAGG
TCGATGACTTCCGGTTTGCGCTGCGCCGGGATCCCAACAAGCTTGGTCGT
GTGCAGGAACTTCTTCGCATGGAGCGTGAGCTGAAAGAGGCCCGTAAGGC
ATTTGATCAGAATGACGATCAGGTCGGGAACTTGAAGGATGCGGGCAAGA
AGGGCCTTGAGGAACTTGGCGAAAGTGTTGATGGGAAGAAGAGTAAGGGC
AAGGGGAAGAGAAATGCAAGAAGGGATTCGGATGCCACGGAGGATACGGC
GCCGAAGAAGAGAAAAGTTGTGGGATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006366transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001727ATCC10864_001727Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001727-T1.exon1ATCC10864_001727-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001727-T1.exon2ATCC10864_001727-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001727-T1.cdsATCC10864_001727-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001727-T1ATCC10864_001727-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF02269
InterProIPR009072
InterProIPR003195
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000029supercontigMCQH01000029:219636..220575 +
Powered by Drupal