You are here

Home

ATCC10864_002302-T1, ATCC10864_002302-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002302-T1
Unique NameATCC10864_002302-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000048:895628..896743+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002302-T1 ID=ATCC10864_002302-T1|Name=ATCC10864_002302-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1116bp|location=Sequence derived from alignment at MCQH01000048:895628..896743+ (Aspergillus niger ATCC 10864)
ATGACGACCTACCAATTCCACGACGTCACCAAATCCGTCACCGACATCGA
CAGACGCAAATGTCGTCGTGAAGTACCGATGCAAGTCCTGGCACTTGGAC
TCTGTCGGACAGGAACAGACTGTAAGGCGTGCGTCAGCTTGAAAGATGCC
TTGCACCCCCGCTAACAAGAGATAAAGCATTGAGACAAGCTCTCCGAGCC
CTAGGGTACAATGATACCTATCACGGATACGCAGCAGTCCTGGAGAACCC
CCGAGATTGTGAGATGTGGCATGCTGCGCTGAGCGCCAAGTATGAGGGGA
AGGGACGACCATTTGGTCGAGAAGAATTCGATCAGATATTGGGGCATTGT
CAGGTACGGACGGTCCCTTTCCCTTTCAACCAGTGATTACCAGATGAGAG
AGAGAAAGAGAGAGTCATATATACTAACAGTCAGATAAATTGATCACTAC
CATAGGCTGTATCCGACTTCCCCGCAGCCTGTTTCGCGGACGAATTAATC
CAAGCCTACCCCGAGGCCAAAGTAATCCTGACAGTCCGAGACGTCGACGA
TTGGCATCGGTGAGTTTCAATACCCCCCTTTTTTTCTTTCATCCCAGTCA
TGCAACACACTCTTCTCATGCCAAATCTACAGATCCGTCAGTAAATCATT
CACGCCCCTCCTCACACACCCTCTTCTCCCCCTCTCCACCATCCTCGAGA
CCCTCCTCCTCTCCCGAACACGCTGGATCCGCCCAACCTGGCAAAAGATA
TGGAAATACTACTTCAACGACGACTTCGACGCCAACGGCCGTAAAGCCTT
CGAGGCGCATAATAGTCATGTGAAAGATATTGTGCCAGCTGAGAACTTGC
TCGTCTATAATGTCAAGGATGGGTGGGAGCCGCTGTGTGAGTTTCTGGGG
AAGACGGTTCCCTTGGATGGGAAGGGTGATGTGGTGCCTTTTCCGAGGGG
GAATGATCCGGGGATCTTTCGAAATAGGTTTCGGGATGCTATTTGGTATA
ACTTTTTGGAGTTGGGGGAGAGGGTGCTTAAGGTTGTTGTTGTTCTGTAT
TTTGGATATTTGTGGGTGGGGGGGATCTGGGGATGGGTTCATGCTAATAT
GTCGAGCTTGGTTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000048:895628..896743+

>ATCC10864_002302-T1 ID=ATCC10864_002302-T1|Name=ATCC10864_002302-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3540bp|location=Sequence derived from alignment at MCQH01000048:895628..896743+ (Aspergillus niger ATCC 10864)
ATGACGACCTACCAATTCCACGACGTCACCAAATCCGTCACCGACATCGA
CAGACGCAAATGTCGTCGTGAAGTACCGATGCAAGTCCTGGCACTTGGAC
TCTGTCGGACAGGAACAGACTCATTGAGACAAGCTCTCCGAGCCCTAGGG
TACAATGATACCTATCACGGATACGCAGCAGTCCTGGAGAACCCCCGAGA
TTGTGAGATGTGGCATGCTGCGCTGAGCGCCAAGTATGAGGGGAAGGGAC
GACCATTTGGTCGAGAAGAATTCGATCAGATATTGGGGCATTGTCAGGCT
GTATCCGACTTCCCCGCAGCCTGTTTCGCGGACGAATTAATCCAAGCCTA
CCCCGAGGCCAAAGTAATCCTGACAGTCCGAGACGTCGACGATTGGCATC
GATCCGTCAGTAAATCATTCACGCCCCTCCTCACACACCCTCTTCTCCCC
CTCTCCACCATCCTCGAGACCCTCCTCCTCTCCCGAACACGCTGGATCCG
CCCAACCTGGCAAAAGATATGGAAATACTACTTCAACGACGACTTCGACG
CCAACGGCCGTAAAGCCTTCGAGGCGCATAATAGTCATGTGAAAGATATT
GTGCCAGCTGAGAACTTGCTCGTCTATAATGTCAAGGATGGGTGGGAGCC
GCTGTGTGAGTTTCTGGGGAAGACGGTTCCCTTGGATGGGAAGGGTGATG
TGGTGCCTTTTCCGAGGGGGAATGATCCGGGGATCTTTCGAAATAGGTTT
CGGGATGCTATTTGGTATAACTTTTTGGAGTTGGGGGAGAGGGTGCTTAA
GGTTGTTGTTGTTCTGTATTTTGGATATTTGTGGGTGGGGGGGATCTGGG
GATGGGTTCATGCTAATATGTCGAGCTTGGTTTGAATGACGACCTACCAA
TTCCACGACGTCACCAAATCCGTCACCGACATCGACAGACGCAAATGTCG
TCGTGAAGTACCGATGCAAGTCCTGGCACTTGGACTCTGTCGGACAGGAA
CAGACTCATTGAGACAAGCTCTCCGAGCCCTAGGGTACAATGATACCTAT
CACGGATACGCAGCAGTCCTGGAGAACCCCCGAGATTGTGAGATGTGGCA
TGCTGCGCTGAGCGCCAAGTATGAGGGGAAGGGACGACCATTTGGTCGAG
AAGAATTCGATCAGATATTGGGGCATTGTCAGGCTGTATCCGACTTCCCC
GCAGCCTGTTTCGCGGACGAATTAATCCAAGCCTACCCCGAGGCCAAAGT
AATCCTGACAGTCCGAGACGTCGACGATTGGCATCGATCCGTCAGTAAAT
CATTCACGCCCCTCCTCACACACCCTCTTCTCCCCCTCTCCACCATCCTC
GAGACCCTCCTCCTCTCCCGAACACGCTGGATCCGCCCAACCTGGCAAAA
GATATGGAAATACTACTTCAACGACGACTTCGACGCCAACGGCCGTAAAG
CCTTCGAGGCGCATAATAGTCATGTGAAAGATATTGTGCCAGCTGAGAAC
TTGCTCGTCTATAATGTCAAGGATGGGTGGGAGCCGCTGTGTGAGTTTCT
GGGGAAGACGGTTCCCTTGGATGGGAAGGGTGATGTGGTGCCTTTTCCGA
GGGGGAATGATCCGGGGATCTTTCGAAATAGGTTTCGGGATGCTATTTGG
TATAACTTTTTGGAGTTGGGGGAGAGGGTGCTTAAGGTTGTTGTTGTTCT
GTATTTTGGATATTTGTGGGTGGGGGGGATCTGGGGATGGGTTCATGCTA
ATATGTCGAGCTTGGTTTGAATGACGACCTACCAATTCCACGACGTCACC
AAATCCGTCACCGACATCGACAGACGCAAATGTCGTCGTGAAGTACCGAT
GCAAGTCCTGGCACTTGGACTCTGTCGGACAGGAACAGACTCATTGAGAC
AAGCTCTCCGAGCCCTAGGGTACAATGATACCTATCACGGATACGCAGCA
GTCCTGGAGAACCCCCGAGATTGTGAGATGTGGCATGCTGCGCTGAGCGC
CAAGTATGAGGGGAAGGGACGACCATTTGGTCGAGAAGAATTCGATCAGA
TATTGGGGCATTGTCAGGCTGTATCCGACTTCCCCGCAGCCTGTTTCGCG
GACGAATTAATCCAAGCCTACCCCGAGGCCAAAGTAATCCTGACAGTCCG
AGACGTCGACGATTGGCATCGATCCGTCAGTAAATCATTCACGCCCCTCC
TCACACACCCTCTTCTCCCCCTCTCCACCATCCTCGAGACCCTCCTCCTC
TCCCGAACACGCTGGATCCGCCCAACCTGGCAAAAGATATGGAAATACTA
CTTCAACGACGACTTCGACGCCAACGGCCGTAAAGCCTTCGAGGCGCATA
ATAGTCATGTGAAAGATATTGTGCCAGCTGAGAACTTGCTCGTCTATAAT
GTCAAGGATGGGTGGGAGCCGCTGTGTGAGTTTCTGGGGAAGACGGTTCC
CTTGGATGGGAAGGGTGATGTGGTGCCTTTTCCGAGGGGGAATGATCCGG
GGATCTTTCGAAATAGGTTTCGGGATGCTATTTGGTATAACTTTTTGGAG
TTGGGGGAGAGGGTGCTTAAGGTTGTTGTTGTTCTGTATTTTGGATATTT
GTGGGTGGGGGGGATCTGGGGATGGGTTCATGCTAATATGTCGAGCTTGG
TTTGAATGACGACCTACCAATTCCACGACGTCACCAAATCCGTCACCGAC
ATCGACAGACGCAAATGTCGTCGTGAAGTACCGATGCAAGTCCTGGCACT
TGGACTCTGTCGGACAGGAACAGACTCATTGAGACAAGCTCTCCGAGCCC
TAGGGTACAATGATACCTATCACGGATACGCAGCAGTCCTGGAGAACCCC
CGAGATTGTGAGATGTGGCATGCTGCGCTGAGCGCCAAGTATGAGGGGAA
GGGACGACCATTTGGTCGAGAAGAATTCGATCAGATATTGGGGCATTGTC
AGGCTGTATCCGACTTCCCCGCAGCCTGTTTCGCGGACGAATTAATCCAA
GCCTACCCCGAGGCCAAAGTAATCCTGACAGTCCGAGACGTCGACGATTG
GCATCGATCCGTCAGTAAATCATTCACGCCCCTCCTCACACACCCTCTTC
TCCCCCTCTCCACCATCCTCGAGACCCTCCTCCTCTCCCGAACACGCTGG
ATCCGCCCAACCTGGCAAAAGATATGGAAATACTACTTCAACGACGACTT
CGACGCCAACGGCCGTAAAGCCTTCGAGGCGCATAATAGTCATGTGAAAG
ATATTGTGCCAGCTGAGAACTTGCTCGTCTATAATGTCAAGGATGGGTGG
GAGCCGCTGTGTGAGTTTCTGGGGAAGACGGTTCCCTTGGATGGGAAGGG
TGATGTGGTGCCTTTTCCGAGGGGGAATGATCCGGGGATCTTTCGAAATA
GGTTTCGGGATGCTATTTGGTATAACTTTTTGGAGTTGGGGGAGAGGGTG
CTTAAGGTTGTTGTTGTTCTGTATTTTGGATATTTGTGGGTGGGGGGGAT
CTGGGGATGGGTTCATGCTAATATGTCGAGCTTGGTTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002302ATCC10864_002302Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002302-T1.exon1ATCC10864_002302-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002302-T1.exon2ATCC10864_002302-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_002302-T1.exon3ATCC10864_002302-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_002302-T1.exon4ATCC10864_002302-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002302-T1.cdsATCC10864_002302-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002302-T1ATCC10864_002302-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR027417
PFAMPF17784
InterProIPR040632
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000048supercontigMCQH01000048:895628..896743 +
Powered by Drupal