You are here

ATCC10864_002338-T1, ATCC10864_002338-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_002338-T1
Unique NameATCC10864_002338-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000051:44004..45370+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_002338-T1 ID=ATCC10864_002338-T1|Name=ATCC10864_002338-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1367bp|location=Sequence derived from alignment at MCQH01000051:44004..45370+ (Aspergillus niger ATCC 10864)
ATGTCGCAGCTGTCTTCTAATCCAATCCCATTTTCGGAGCCGCCATATCT CTGCGGGCTTCCTTCGCCCTACTACTCGCCGGGCCATCGTCGCTTTCAGA AAGCGTGTCGCGAATTTTTCTGGGAGCATTTACACAGTCATGCGGCAGAG TATGAGAAGGCCGGACAGGTTCCCGAGCATGTCTTCCACACTTTTTGCAA GCATAACATGCTTCTCCCGAACATCGGCGCGCCCTTGCCAGTGGAATGGC TGAAGCGCTTGGGAATTGCCGACATCCTGGGAGTCAAGGTGGAGGACTGG GACTATATGTACACGGGAATTTATTTTGACGAGGTAGGTATCCCTGGTAA ACGACAGGGCACAACTGACAGCTTCAGATGGCACGATCCGGTATGGCTGG GCCGGGTTCATCCCTGAACGCCGGATTCAACTTTGCGATTCCGCCTGTCC TGAAGTATGGCAGCCGGGAGCTGCAGGAACGCTTTCTCCCGGATCTTTTG ACTGGTCGCAAACGCTGCTGTATCGCTATCACGGAGCCAGAGGCAGGCAG CGATGTTGCCAACATCACCACGACAGCGACCAAGACACCAGACGGCAAGT ATTACCTGGTCAATGGCGCGAAGAAGTGGATCACCAACGGGATCTGGTCT GACTTTGCGACCATGGCCGTTCGCACCGGTGGTCCGGGAGCGTCTGGCCT TTCTCTTCTGCTCGTTCCATTGAAGGGGCACCCCGGCGTCACGATGCGCC CGCTCAAGGTCACCGGCCCGATCACTAGTGGAACCACCTACATTGAATTG GACGATGTCAAGGTGCCTGTGGAGAATTTAGTCGGCCGAGAGGGGGACGG CATGCGAATGATCATGACGAACTTCAACCACGAACGCCTTTCGATCGCGG TCGGCGTCACGCGACAGGCTCGTGTGGCCCTGTCCACCGCCTTCCAATAC TGCCTGAAACGAGAGGCCTTTGGCAAAACACTCATGGACCAACCCGTTGT TCGAAACCGCCTCGCTAGGGCGGGCGCTGAGTTGGAAACGCTGGGGGCCT TTGTTGAGCAGCTCCTCTACCAACTGTGTCATCTTTCCAAGGAAGAGGGG GATCGCAGGCTGGGTGGGATCACTGCCCTCGCCAAGGCCAAGGCGGGAAT GGTGCTGAACGAGTGTGCACAGTGTGCGATTCTCCTATTTGGTGGAGCCG GGTTGACCCAAGGCGGACAGGGCGAGCTGGTCGAGTCGATTCTCCGGGAG GTGCCAGCTGCCCGGATCCCGGGTGGTAGTGAGGATGTTTTGCTTGACCT GGCCGTGCGACAGTTGGTGAAGGTCTATCAAACGGGGCAGAGGAAGTTGA ATCAGTCGAAGATGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000051:44004..45370+

>ATCC10864_002338-T1 ID=ATCC10864_002338-T1|Name=ATCC10864_002338-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2646bp|location=Sequence derived from alignment at MCQH01000051:44004..45370+ (Aspergillus niger ATCC 10864)
ATGTCGCAGCTGTCTTCTAATCCAATCCCATTTTCGGAGCCGCCATATCT
CTGCGGGCTTCCTTCGCCCTACTACTCGCCGGGCCATCGTCGCTTTCAGA
AAGCGTGTCGCGAATTTTTCTGGGAGCATTTACACAGTCATGCGGCAGAG
TATGAGAAGGCCGGACAGGTTCCCGAGCATGTCTTCCACACTTTTTGCAA
GCATAACATGCTTCTCCCGAACATCGGCGCGCCCTTGCCAGTGGAATGGC
TGAAGCGCTTGGGAATTGCCGACATCCTGGGAGTCAAGGTGGAGGACTGG
GACTATATGTACACGGGAATTTATTTTGACGAGATGGCACGATCCGGTAT
GGCTGGGCCGGGTTCATCCCTGAACGCCGGATTCAACTTTGCGATTCCGC
CTGTCCTGAAGTATGGCAGCCGGGAGCTGCAGGAACGCTTTCTCCCGGAT
CTTTTGACTGGTCGCAAACGCTGCTGTATCGCTATCACGGAGCCAGAGGC
AGGCAGCGATGTTGCCAACATCACCACGACAGCGACCAAGACACCAGACG
GCAAGTATTACCTGGTCAATGGCGCGAAGAAGTGGATCACCAACGGGATC
TGGTCTGACTTTGCGACCATGGCCGTTCGCACCGGTGGTCCGGGAGCGTC
TGGCCTTTCTCTTCTGCTCGTTCCATTGAAGGGGCACCCCGGCGTCACGA
TGCGCCCGCTCAAGGTCACCGGCCCGATCACTAGTGGAACCACCTACATT
GAATTGGACGATGTCAAGGTGCCTGTGGAGAATTTAGTCGGCCGAGAGGG
GGACGGCATGCGAATGATCATGACGAACTTCAACCACGAACGCCTTTCGA
TCGCGGTCGGCGTCACGCGACAGGCTCGTGTGGCCCTGTCCACCGCCTTC
CAATACTGCCTGAAACGAGAGGCCTTTGGCAAAACACTCATGGACCAACC
CGTTGTTCGAAACCGCCTCGCTAGGGCGGGCGCTGAGTTGGAAACGCTGG
GGGCCTTTGTTGAGCAGCTCCTCTACCAACTGTGTCATCTTTCCAAGGAA
GAGGGGGATCGCAGGCTGGGTGGGATCACTGCCCTCGCCAAGGCCAAGGC
GGGAATGGTGCTGAACGAGTGTGCACAGTGTGCGATTCTCCTATTTGGTG
GAGCCGGGTTGACCCAAGGCGGACAGGGCGAGCTGGTCGAGTCGATTCTC
CGGGAGGTGCCAGCTGCCCGGATCCCGGGTGGTAGTGAGGATGTTTTGCT
TGACCTGGCCGTGCGACAGTTGGTGAAGGTCTATCAAACGGGGCAGAGGA
AGTTGAATCAGTCGAAGATGTAGATGTCGCAGCTGTCTTCTAATCCAATC
CCATTTTCGGAGCCGCCATATCTCTGCGGGCTTCCTTCGCCCTACTACTC
GCCGGGCCATCGTCGCTTTCAGAAAGCGTGTCGCGAATTTTTCTGGGAGC
ATTTACACAGTCATGCGGCAGAGTATGAGAAGGCCGGACAGGTTCCCGAG
CATGTCTTCCACACTTTTTGCAAGCATAACATGCTTCTCCCGAACATCGG
CGCGCCCTTGCCAGTGGAATGGCTGAAGCGCTTGGGAATTGCCGACATCC
TGGGAGTCAAGGTGGAGGACTGGGACTATATGTACACGGGAATTTATTTT
GACGAGATGGCACGATCCGGTATGGCTGGGCCGGGTTCATCCCTGAACGC
CGGATTCAACTTTGCGATTCCGCCTGTCCTGAAGTATGGCAGCCGGGAGC
TGCAGGAACGCTTTCTCCCGGATCTTTTGACTGGTCGCAAACGCTGCTGT
ATCGCTATCACGGAGCCAGAGGCAGGCAGCGATGTTGCCAACATCACCAC
GACAGCGACCAAGACACCAGACGGCAAGTATTACCTGGTCAATGGCGCGA
AGAAGTGGATCACCAACGGGATCTGGTCTGACTTTGCGACCATGGCCGTT
CGCACCGGTGGTCCGGGAGCGTCTGGCCTTTCTCTTCTGCTCGTTCCATT
GAAGGGGCACCCCGGCGTCACGATGCGCCCGCTCAAGGTCACCGGCCCGA
TCACTAGTGGAACCACCTACATTGAATTGGACGATGTCAAGGTGCCTGTG
GAGAATTTAGTCGGCCGAGAGGGGGACGGCATGCGAATGATCATGACGAA
CTTCAACCACGAACGCCTTTCGATCGCGGTCGGCGTCACGCGACAGGCTC
GTGTGGCCCTGTCCACCGCCTTCCAATACTGCCTGAAACGAGAGGCCTTT
GGCAAAACACTCATGGACCAACCCGTTGTTCGAAACCGCCTCGCTAGGGC
GGGCGCTGAGTTGGAAACGCTGGGGGCCTTTGTTGAGCAGCTCCTCTACC
AACTGTGTCATCTTTCCAAGGAAGAGGGGGATCGCAGGCTGGGTGGGATC
ACTGCCCTCGCCAAGGCCAAGGCGGGAATGGTGCTGAACGAGTGTGCACA
GTGTGCGATTCTCCTATTTGGTGGAGCCGGGTTGACCCAAGGCGGACAGG
GCGAGCTGGTCGAGTCGATTCTCCGGGAGGTGCCAGCTGCCCGGATCCCG
GGTGGTAGTGAGGATGTTTTGCTTGACCTGGCCGTGCGACAGTTGGTGAA
GGTCTATCAAACGGGGCAGAGGAAGTTGAATCAGTCGAAGATGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660flavin adenine dinucleotide binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_002338ATCC10864_002338Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002338-T1.exon1ATCC10864_002338-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_002338-T1.exon2ATCC10864_002338-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002338-T1.cdsATCC10864_002338-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_002338-T1ATCC10864_002338-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036250
InterProIPR037069
InterProIPR009075
InterProIPR013786
PFAMPF00441
InterProIPR006091
PFAMPF02771
PFAMPF02770
InterProIPR009100
PFAMPF08028
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000051supercontigMCQH01000051:44004..45370 +