You are here

Home

ATCC10864_003182-T1, ATCC10864_003182-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003182-T1
Unique NameATCC10864_003182-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000066:333236..334500+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003182-T1 ID=ATCC10864_003182-T1|Name=ATCC10864_003182-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1265bp|location=Sequence derived from alignment at MCQH01000066:333236..334500+ (Aspergillus niger ATCC 10864)
ATGGCTCCCGCTAATCGAGAAATGGGCGCCTCCACGCGCGCTCTACATGT
CGACGATGCCCTGAATGTCGTCACGGATGTAGCTCCGCCAATTCACGTAG
CCACTACTTTCCGCTACTCTGACAACCCCGATGATTTAGTGCCCTGGGCC
GACCGCAGTGGGGTATGTCTTTCGCTCCCCGACCGAATGCACTCCGAGCT
CGGTGCTAATCGTGCCCCCGTGTTTAGGATCAGAAGAACAACACAGCCCA
CGTCTATTCTCGGCTGACCGCCCCTAATTATACTCGGTTTGAAGCTATCT
TGTCTTCACTCCTCAACGGACAGGCCATTAGCTACTCCTCGGGACTGTCG
GCTTTGCACGCGGCGCTCGTCCTGCTTAAACCTCGCCGGATTGCCATTGG
AAACGGCTACCACGGATGCCATGGCGTGATCTCTTTGTTCAGTCGCCTGA
CTGGGCTTCAGAAGCTAGATTTGGATTGCCCGGCCGAGCAGCTGGAGGCT
GGCGACGTGATCCACTTGGAAACGCCGGTCAATCCCGAGGGAACCGCCTT
CAATATCGAAGCGTATGCCCAAAAGGCTCATTCTCGCGGCGCGTACCTCA
TCGTTGATGGTACATTTGCTCCGCCCTTCCTTCAAGACCCTTTCGAGTGG
GGCGCCGACTTGGTGATGCACTCGGGGTCCAAGTATTTTGGCGGACACAG
TGACGTTCTATGCGGAGTCCTTGCCACACAGCGTGAGGATTGGGCGAAAC
AACTGTTAGAGGACCGGGTCTTCTTGGGCAGTGTTATGGGGAACATGGAG
AGTTGGTTAGGCGTTCGCAGCTTGCGGACTCTGGAAGTCCGAGTGCAGCG
CCAGAGCCAGAACGCAACCAGTCTTGTATCCTGGCTGAACGATGCACTGC
GTGCGCCCAGCCCGGCTCCGGGAAGTGACGAAGCTGTGGTTCAGCGCGCC
CTCGAACAGGTGTTCCACGCCAGCTTGCAGAAGGAAGATGAGTCTTGGCT
GTTGAAGCAGATGCCTAATGGGTTCGGACCGGTATTCTCGATCACCATGA
AGACGGAGGATTTTGCTCGGAAACTCCCGAGCAAGCTGGCCTTCTTCCAG
CATGCCACCAGTCTTGGAGGAGTGGAAACGTTGATTGAGTGGCGGACAAT
GTCGGATGCGACAGTGGATCGCCGGTTGCTGCGCATCAGTGTTGGGTTGG
AGAACTGGGAGGATCTCCGGCAGGATCTGGTGAACGCGTTCAAGGAATTA
GTCGAGGGTAAATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000066:333236..334500+

>ATCC10864_003182-T1 ID=ATCC10864_003182-T1|Name=ATCC10864_003182-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2400bp|location=Sequence derived from alignment at MCQH01000066:333236..334500+ (Aspergillus niger ATCC 10864)
ATGGCTCCCGCTAATCGAGAAATGGGCGCCTCCACGCGCGCTCTACATGT
CGACGATGCCCTGAATGTCGTCACGGATGTAGCTCCGCCAATTCACGTAG
CCACTACTTTCCGCTACTCTGACAACCCCGATGATTTAGTGCCCTGGGCC
GACCGCAGTGGGGATCAGAAGAACAACACAGCCCACGTCTATTCTCGGCT
GACCGCCCCTAATTATACTCGGTTTGAAGCTATCTTGTCTTCACTCCTCA
ACGGACAGGCCATTAGCTACTCCTCGGGACTGTCGGCTTTGCACGCGGCG
CTCGTCCTGCTTAAACCTCGCCGGATTGCCATTGGAAACGGCTACCACGG
ATGCCATGGCGTGATCTCTTTGTTCAGTCGCCTGACTGGGCTTCAGAAGC
TAGATTTGGATTGCCCGGCCGAGCAGCTGGAGGCTGGCGACGTGATCCAC
TTGGAAACGCCGGTCAATCCCGAGGGAACCGCCTTCAATATCGAAGCGTA
TGCCCAAAAGGCTCATTCTCGCGGCGCGTACCTCATCGTTGATGGTACAT
TTGCTCCGCCCTTCCTTCAAGACCCTTTCGAGTGGGGCGCCGACTTGGTG
ATGCACTCGGGGTCCAAGTATTTTGGCGGACACAGTGACGTTCTATGCGG
AGTCCTTGCCACACAGCGTGAGGATTGGGCGAAACAACTGTTAGAGGACC
GGGTCTTCTTGGGCAGTGTTATGGGGAACATGGAGAGTTGGTTAGGCGTT
CGCAGCTTGCGGACTCTGGAAGTCCGAGTGCAGCGCCAGAGCCAGAACGC
AACCAGTCTTGTATCCTGGCTGAACGATGCACTGCGTGCGCCCAGCCCGG
CTCCGGGAAGTGACGAAGCTGTGGTTCAGCGCGCCCTCGAACAGGTGTTC
CACGCCAGCTTGCAGAAGGAAGATGAGTCTTGGCTGTTGAAGCAGATGCC
TAATGGGTTCGGACCGGTATTCTCGATCACCATGAAGACGGAGGATTTTG
CTCGGAAACTCCCGAGCAAGCTGGCCTTCTTCCAGCATGCCACCAGTCTT
GGAGGAGTGGAAACGTTGATTGAGTGGCGGACAATGTCGGATGCGACAGT
GGATCGCCGGTTGCTGCGCATCAGTGTTGGGTTGGAGAACTGGGAGGATC
TCCGGCAGGATCTGGTGAACGCGTTCAAGGAATTAGTCGAGGGTAAATAA
ATGGCTCCCGCTAATCGAGAAATGGGCGCCTCCACGCGCGCTCTACATGT
CGACGATGCCCTGAATGTCGTCACGGATGTAGCTCCGCCAATTCACGTAG
CCACTACTTTCCGCTACTCTGACAACCCCGATGATTTAGTGCCCTGGGCC
GACCGCAGTGGGGATCAGAAGAACAACACAGCCCACGTCTATTCTCGGCT
GACCGCCCCTAATTATACTCGGTTTGAAGCTATCTTGTCTTCACTCCTCA
ACGGACAGGCCATTAGCTACTCCTCGGGACTGTCGGCTTTGCACGCGGCG
CTCGTCCTGCTTAAACCTCGCCGGATTGCCATTGGAAACGGCTACCACGG
ATGCCATGGCGTGATCTCTTTGTTCAGTCGCCTGACTGGGCTTCAGAAGC
TAGATTTGGATTGCCCGGCCGAGCAGCTGGAGGCTGGCGACGTGATCCAC
TTGGAAACGCCGGTCAATCCCGAGGGAACCGCCTTCAATATCGAAGCGTA
TGCCCAAAAGGCTCATTCTCGCGGCGCGTACCTCATCGTTGATGGTACAT
TTGCTCCGCCCTTCCTTCAAGACCCTTTCGAGTGGGGCGCCGACTTGGTG
ATGCACTCGGGGTCCAAGTATTTTGGCGGACACAGTGACGTTCTATGCGG
AGTCCTTGCCACACAGCGTGAGGATTGGGCGAAACAACTGTTAGAGGACC
GGGTCTTCTTGGGCAGTGTTATGGGGAACATGGAGAGTTGGTTAGGCGTT
CGCAGCTTGCGGACTCTGGAAGTCCGAGTGCAGCGCCAGAGCCAGAACGC
AACCAGTCTTGTATCCTGGCTGAACGATGCACTGCGTGCGCCCAGCCCGG
CTCCGGGAAGTGACGAAGCTGTGGTTCAGCGCGCCCTCGAACAGGTGTTC
CACGCCAGCTTGCAGAAGGAAGATGAGTCTTGGCTGTTGAAGCAGATGCC
TAATGGGTTCGGACCGGTATTCTCGATCACCATGAAGACGGAGGATTTTG
CTCGGAAACTCCCGAGCAAGCTGGCCTTCTTCCAGCATGCCACCAGTCTT
GGAGGAGTGGAAACGTTGATTGAGTGGCGGACAATGTCGGATGCGACAGT
GGATCGCCGGTTGCTGCGCATCAGTGTTGGGTTGGAGAACTGGGAGGATC
TCCGGCAGGATCTGGTGAACGCGTTCAAGGAATTAGTCGAGGGTAAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019346transsulfuration
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003182ATCC10864_003182Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003182-T1.exon1ATCC10864_003182-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003182-T1.exon2ATCC10864_003182-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003182-T1.cdsATCC10864_003182-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003182-T1ATCC10864_003182-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000277
InterProIPR015422
InterProIPR015424
PFAMPF01053
InterProIPR015421
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000066supercontigMCQH01000066:333236..334500 +
Powered by Drupal