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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000066:673134..673830+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_003282-T1 ID=ATCC10864_003282-T1|Name=ATCC10864_003282-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=697bp|location=Sequence derived from alignment at MCQH01000066:673134..673830+ (Aspergillus niger ATCC 10864)
ATGTCCGTTTCCGCCCAGGCCGCAGCTCGCTGCTGCAGACAGATCGTCCG
CCCTACCGCTTCTCTGCGCCTTGCTCCCACGACATACCTGTCCCAGCGCA
CACTCAGCCGGAGATGGCAATCCACTGAGGCGGAGGCTGCTGCTGCTCCT
GCCAACCCCAAGATCACCCAGATTGTCGACCAGATCAGCCAATTGACCCT
GCTTGAGACCGCCGACCTTGTGTCCACCCTGAAGGTGCGTTGTTTTGCAT
CCCCGGATCTGTGTCGCAAACTCCGCACCGTGCCCGTTTTGGGCTGTATT
CCATCCATTGTGGTGGATTGATGCTTGTCGAATCACATTGAGCTCGATAC
TGACTTGCACATTGTCATCTTAGACCCGCCTGAACATCCCCGACCTGCCC
GTTGGCGGTTTCGCCGTGGGCGCTGCTCCCGCCGCTCCCGCCGCTGCTGA
GGAAGAGGAGGCTGCTCCCGCCCAGCAGGAGAAGACCCTTTTCAACCTGA
AGCTCGAGTCCGTTGACGCCTCCTCCAAGGCCAAGGTCATCAAGGAGATC
AAGACCCTCCTCGGCCTGTCCCTGGTCGACAGCAAGAAGTTCGTCGAGTC
CGTTCCCAAGGTCCTGAAGGAGTCTGTGCCCAAGGAGGAGGCCGAGAAGA
TCGTGGAGACCCTCAAGGCCGTGGGCGCCAAGGCCACTATGGACTAA back to topCoding sequence (CDS) from alignment at MCQH01000066:673134..673830+ >ATCC10864_003282-T1 ID=ATCC10864_003282-T1|Name=ATCC10864_003282-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1116bp|location=Sequence derived from alignment at MCQH01000066:673134..673830+ (Aspergillus niger ATCC 10864)
ATGTCCGTTTCCGCCCAGGCCGCAGCTCGCTGCTGCAGACAGATCGTCCG
CCCTACCGCTTCTCTGCGCCTTGCTCCCACGACATACCTGTCCCAGCGCA
CACTCAGCCGGAGATGGCAATCCACTGAGGCGGAGGCTGCTGCTGCTCCT
GCCAACCCCAAGATCACCCAGATTGTCGACCAGATCAGCCAATTGACCCT
GCTTGAGACCGCCGACCTTGTGTCCACCCTGAAGACCCGCCTGAACATCC
CCGACCTGCCCGTTGGCGGTTTCGCCGTGGGCGCTGCTCCCGCCGCTCCC
GCCGCTGCTGAGGAAGAGGAGGCTGCTCCCGCCCAGCAGGAGAAGACCCT
TTTCAACCTGAAGCTCGAGTCCGTTGACGCCTCCTCCAAGGCCAAGGTCA
TCAAGGAGATCAAGACCCTCCTCGGCCTGTCCCTGGTCGACAGCAAGAAG
TTCGTCGAGTCCGTTCCCAAGGTCCTGAAGGAGTCTGTGCCCAAGGAGGA
GGCCGAGAAGATCGTGGAGACCCTCAAGGCCGTGGGCGCCAAGGCCACTA
TGGACTAAATGTCCGTTTCCGCCCAGGCCGCAGCTCGCTGCTGCAGACAG
ATCGTCCGCCCTACCGCTTCTCTGCGCCTTGCTCCCACGACATACCTGTC
CCAGCGCACACTCAGCCGGAGATGGCAATCCACTGAGGCGGAGGCTGCTG
CTGCTCCTGCCAACCCCAAGATCACCCAGATTGTCGACCAGATCAGCCAA
TTGACCCTGCTTGAGACCGCCGACCTTGTGTCCACCCTGAAGACCCGCCT
GAACATCCCCGACCTGCCCGTTGGCGGTTTCGCCGTGGGCGCTGCTCCCG
CCGCTCCCGCCGCTGCTGAGGAAGAGGAGGCTGCTCCCGCCCAGCAGGAG
AAGACCCTTTTCAACCTGAAGCTCGAGTCCGTTGACGCCTCCTCCAAGGC
CAAGGTCATCAAGGAGATCAAGACCCTCCTCGGCCTGTCCCTGGTCGACA
GCAAGAAGTTCGTCGAGTCCGTTCCCAAGGTCCTGAAGGAGTCTGTGCCC
AAGGAGGAGGCCGAGAAGATCGTGGAGACCCTCAAGGCCGTGGGCGCCAA
GGCCACTATGGACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF00542 |
| InterPro | IPR000206 |
| InterPro | IPR008932 |
| PFAM | PF16320 |
| InterPro | IPR014719 |
| InterPro | IPR036235 |
| InterPro | IPR013823 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265HPJ |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000066 | supercontig | MCQH01000066:673134..673830 + |
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