You are here

ATCC10864_003581-T1, ATCC10864_003581-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003581-T1
Unique NameATCC10864_003581-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:9613..10082+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003581-T1 ID=ATCC10864_003581-T1|Name=ATCC10864_003581-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=470bp|location=Sequence derived from alignment at MCQH01000068:9613..10082+ (Aspergillus niger ATCC 10864)
ATGTCGCAGTTCCGGTCCAAGATCCTCGACCTCGGCGGGTTCATCAACCC CCGTGTTGTCCGCGACCACACCAAGCGGAAGGTTTTCGAGCAATTCGAGC CGGAACGGTAATTTCAACCTACCTGCTGAAGGTCGAGCCGAACAGCTACT AATAGATTTATTCTGATATATAGCCAAGCTCTTCGCTACGTGATCCACAA CACTTCCCTCCCCCAGCGTGTGCGCGCCCAGGCCCAGCTCCAGCTCGCTT CCATGCACGCCTACACTCGCTCGACGCAGATCAAGAACCGCTGTGTGGCG GGTGGTGTTCCTCGCAGTGTTATCCGGGCGTTTAGACTTGGTAGAGTAAG TTTATCCCTAGGGAGGGGGTATTTGGTTGGATAAATACTAATAGTTGGTT TGTGCAGTACCAATTCCGTCAGCAGGCGCTGGCTGGTGAACTCCCCGGTG TGAAGAAGGCCAGTTGGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000068:9613..10082+

>ATCC10864_003581-T1 ID=ATCC10864_003581-T1|Name=ATCC10864_003581-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1026bp|location=Sequence derived from alignment at MCQH01000068:9613..10082+ (Aspergillus niger ATCC 10864)
ATGTCGCAGTTCCGGTCCAAGATCCTCGACCTCGGCGGGTTCATCAACCC
CCGTGTTGTCCGCGACCACACCAAGCGGAAGGTTTTCGAGCAATTCGAGC
CGGAACGCCAAGCTCTTCGCTACGTGATCCACAACACTTCCCTCCCCCAG
CGTGTGCGCGCCCAGGCCCAGCTCCAGCTCGCTTCCATGCACGCCTACAC
TCGCTCGACGCAGATCAAGAACCGCTGTGTGGCGGGTGGTGTTCCTCGCA
GTGTTATCCGGGCGTTTAGACTTGGTAGATACCAATTCCGTCAGCAGGCG
CTGGCTGGTGAACTCCCCGGTGTGAAGAAGGCCAGTTGGTAAATGTCGCA
GTTCCGGTCCAAGATCCTCGACCTCGGCGGGTTCATCAACCCCCGTGTTG
TCCGCGACCACACCAAGCGGAAGGTTTTCGAGCAATTCGAGCCGGAACGC
CAAGCTCTTCGCTACGTGATCCACAACACTTCCCTCCCCCAGCGTGTGCG
CGCCCAGGCCCAGCTCCAGCTCGCTTCCATGCACGCCTACACTCGCTCGA
CGCAGATCAAGAACCGCTGTGTGGCGGGTGGTGTTCCTCGCAGTGTTATC
CGGGCGTTTAGACTTGGTAGATACCAATTCCGTCAGCAGGCGCTGGCTGG
TGAACTCCCCGGTGTGAAGAAGGCCAGTTGGTAAATGTCGCAGTTCCGGT
CCAAGATCCTCGACCTCGGCGGGTTCATCAACCCCCGTGTTGTCCGCGAC
CACACCAAGCGGAAGGTTTTCGAGCAATTCGAGCCGGAACGCCAAGCTCT
TCGCTACGTGATCCACAACACTTCCCTCCCCCAGCGTGTGCGCGCCCAGG
CCCAGCTCCAGCTCGCTTCCATGCACGCCTACACTCGCTCGACGCAGATC
AAGAACCGCTGTGTGGCGGGTGGTGTTCCTCGCAGTGTTATCCGGGCGTT
TAGACTTGGTAGATACCAATTCCGTCAGCAGGCGCTGGCTGGTGAACTCC
CCGGTGTGAAGAAGGCCAGTTGGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003581ATCC10864_003581Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003581-T1.exon1ATCC10864_003581-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003581-T1.exon2ATCC10864_003581-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003581-T1.exon3ATCC10864_003581-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003581-T1.cdsATCC10864_003581-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003581-T1ATCC10864_003581-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00253
InterProIPR001209
Properties
Property NameValue
NoteBUSCO:EOG09265D7J
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:9613..10082 +