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ATCC10864_003729-T1, ATCC10864_003729-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_003729-T1
Unique NameATCC10864_003729-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000068:450346..451601+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_003729-T1 ID=ATCC10864_003729-T1|Name=ATCC10864_003729-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1256bp|location=Sequence derived from alignment at MCQH01000068:450346..451601+ (Aspergillus niger ATCC 10864)
ATGATTGTTCGGCAACTTGTGCGGCAAAGTGAGTTACTCCATGGATTGGG
TTTATTGATAGGAAATATTGATGCTGATTCCCCCGTCCCCATCTAGGCCG
CCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTCTCTT
CCACGGAGACGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGAGCAA
GCACCTCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGCCTGG
TACGTCTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCGCCGTAAGT
ACCGCAATATTCTAGCTGTTACGCCTGTCGCTGCCCGAAGGGAAAGCTAA
TATACATCCTCTGGTTCAGGAGTCAAATTCCACAGTCTCGGTAGCGATGT
GACCGGCGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCTCAAGCCA
CCGACGTTACCCTCGAAATGCTCCTCGCCAACCAGACACACCTTGGACAC
TCGACTTCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCGGTATCAG
GGAGGGAACTCACATCATCTCCCTTGATGTGACGGCGGCTTACCTCCGCC
GTGCGGCCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATTGATTCTC
TTTGCGGGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAGCTGCGGA
ATTGGCTCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGTAGCTTGA
CCAATGGCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGTGAACGGC
TTGGATGAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAATCTTACCG
TGCACTTAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAGAACGTTG
TCCTGTTGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGGTATCATC
GACACCGACGCCGACCCTACCCGTGTCACATACCCGATCCCTGCGAACGA
CGACAGTTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGACGGGCAG
GAGAAGTGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGGTCACTTG
ACGTATGAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGCAGACTCT
AGAGACCGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAAGTTGTCT
CTGAGGGAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAAGGATGAC
GAATAG
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Coding sequence (CDS) from alignment at MCQH01000068:450346..451601+

>ATCC10864_003729-T1 ID=ATCC10864_003729-T1|Name=ATCC10864_003729-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3339bp|location=Sequence derived from alignment at MCQH01000068:450346..451601+ (Aspergillus niger ATCC 10864)
ATGATTGTTCGGCAACTTGTGCGGCAAAGCCGCCAGCTTCGGGCTCTTCC
CCGTCAGTCGCGCATCTTGTCCCGATTCTCTTCCACGGAGACGACTGGCC
AGACCCCAGTACAGACTATCGTTGCGGAGCAAGCACCTCAATTAGAGACG
CCCGCACCGACTGTTGCAGTGCGGGAGCCTGGTACGTCTGGTGCACAAGA
GAGATTGGATCCGAACACGCTCCGCCGAGTCAAATTCCACAGTCTCGGTA
GCGATGTGACCGGCGTCTACCGGCCAGAGAGCCTCCTCAAAAACCCTCCT
CAAGCCACCGACGTTACCCTCGAAATGCTCCTCGCCAACCAGACACACCT
TGGACACTCGACTTCCCGCTGGAACCCCCAGAACTCGCGCTATATCTTCG
GTATCAGGGAGGGAACTCACATCATCTCCCTTGATGTGACGGCGGCTTAC
CTCCGCCGTGCGGCCAAGGTCGTGGAGGAGGTTGCCTACCGGGGTGGATT
GATTCTCTTTGCGGGCACGCGAAAGGGACAGAAGCGTGCCGTGGTCAGAG
CTGCGGAATTGGCTCAGGGATATCACATTTTCGAGCGTTGGATCCCTGGT
AGCTTGACCAATGGCCAGCAGATCTTGGGCCATTGCGAAAAGAAGATTGT
GAACGGCTTGGATGAGACGTTGGATGATCTCTGGAAAGAGGAATTGGAAT
CTTACCGTGCACTTAAGCCCGACCTTGTTGTTTGCTTGAACCCCGTCGAG
AACGTTGTCCTGTTGCACGAGTGTGGTCTCAACAACGTCCCGACTATCGG
TATCATCGACACCGACGCCGACCCTACCCGTGTCACATACCCGATCCCTG
CGAACGACGACAGTTTGCGTTCCGTGACTCTGATTGCTGGTGTGCTGGGA
CGGGCAGGAGAAGTGGGTCAGCGGAGAAGATTGGCGAGAGCGCGCAAGGG
TCACTTGACGTATGAACATATGGAGCCACTCCGTGTCCAAGTAGAGGAGC
AGACTCTAGAGACCGCGGAAGGACAGAAGTCAGAAGCCTCCTCCCAGGAA
GTTGTCTCTGAGGGAAGCCCGCTCGAGAAGCCTAAGGAAGAGGCTTCCAA
GGATGACGAATAGATGATTGTTCGGCAACTTGTGCGGCAAAGCCGCCAGC
TTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCGATTCTCTTCCACG
GAGACGACTGGCCAGACCCCAGTACAGACTATCGTTGCGGAGCAAGCACC
TCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGGGAGCCTGGTACGT
CTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCGCCGAGTCAAATTC
CACAGTCTCGGTAGCGATGTGACCGGCGTCTACCGGCCAGAGAGCCTCCT
CAAAAACCCTCCTCAAGCCACCGACGTTACCCTCGAAATGCTCCTCGCCA
ACCAGACACACCTTGGACACTCGACTTCCCGCTGGAACCCCCAGAACTCG
CGCTATATCTTCGGTATCAGGGAGGGAACTCACATCATCTCCCTTGATGT
GACGGCGGCTTACCTCCGCCGTGCGGCCAAGGTCGTGGAGGAGGTTGCCT
ACCGGGGTGGATTGATTCTCTTTGCGGGCACGCGAAAGGGACAGAAGCGT
GCCGTGGTCAGAGCTGCGGAATTGGCTCAGGGATATCACATTTTCGAGCG
TTGGATCCCTGGTAGCTTGACCAATGGCCAGCAGATCTTGGGCCATTGCG
AAAAGAAGATTGTGAACGGCTTGGATGAGACGTTGGATGATCTCTGGAAA
GAGGAATTGGAATCTTACCGTGCACTTAAGCCCGACCTTGTTGTTTGCTT
GAACCCCGTCGAGAACGTTGTCCTGTTGCACGAGTGTGGTCTCAACAACG
TCCCGACTATCGGTATCATCGACACCGACGCCGACCCTACCCGTGTCACA
TACCCGATCCCTGCGAACGACGACAGTTTGCGTTCCGTGACTCTGATTGC
TGGTGTGCTGGGACGGGCAGGAGAAGTGGGTCAGCGGAGAAGATTGGCGA
GAGCGCGCAAGGGTCACTTGACGTATGAACATATGGAGCCACTCCGTGTC
CAAGTAGAGGAGCAGACTCTAGAGACCGCGGAAGGACAGAAGTCAGAAGC
CTCCTCCCAGGAAGTTGTCTCTGAGGGAAGCCCGCTCGAGAAGCCTAAGG
AAGAGGCTTCCAAGGATGACGAATAGATGATTGTTCGGCAACTTGTGCGG
CAAAGCCGCCAGCTTCGGGCTCTTCCCCGTCAGTCGCGCATCTTGTCCCG
ATTCTCTTCCACGGAGACGACTGGCCAGACCCCAGTACAGACTATCGTTG
CGGAGCAAGCACCTCAATTAGAGACGCCCGCACCGACTGTTGCAGTGCGG
GAGCCTGGTACGTCTGGTGCACAAGAGAGATTGGATCCGAACACGCTCCG
CCGAGTCAAATTCCACAGTCTCGGTAGCGATGTGACCGGCGTCTACCGGC
CAGAGAGCCTCCTCAAAAACCCTCCTCAAGCCACCGACGTTACCCTCGAA
ATGCTCCTCGCCAACCAGACACACCTTGGACACTCGACTTCCCGCTGGAA
CCCCCAGAACTCGCGCTATATCTTCGGTATCAGGGAGGGAACTCACATCA
TCTCCCTTGATGTGACGGCGGCTTACCTCCGCCGTGCGGCCAAGGTCGTG
GAGGAGGTTGCCTACCGGGGTGGATTGATTCTCTTTGCGGGCACGCGAAA
GGGACAGAAGCGTGCCGTGGTCAGAGCTGCGGAATTGGCTCAGGGATATC
ACATTTTCGAGCGTTGGATCCCTGGTAGCTTGACCAATGGCCAGCAGATC
TTGGGCCATTGCGAAAAGAAGATTGTGAACGGCTTGGATGAGACGTTGGA
TGATCTCTGGAAAGAGGAATTGGAATCTTACCGTGCACTTAAGCCCGACC
TTGTTGTTTGCTTGAACCCCGTCGAGAACGTTGTCCTGTTGCACGAGTGT
GGTCTCAACAACGTCCCGACTATCGGTATCATCGACACCGACGCCGACCC
TACCCGTGTCACATACCCGATCCCTGCGAACGACGACAGTTTGCGTTCCG
TGACTCTGATTGCTGGTGTGCTGGGACGGGCAGGAGAAGTGGGTCAGCGG
AGAAGATTGGCGAGAGCGCGCAAGGGTCACTTGACGTATGAACATATGGA
GCCACTCCGTGTCCAAGTAGAGGAGCAGACTCTAGAGACCGCGGAAGGAC
AGAAGTCAGAAGCCTCCTCCCAGGAAGTTGTCTCTGAGGGAAGCCCGCTC
GAGAAGCCTAAGGAAGAGGCTTCCAAGGATGACGAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015935small ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_003729ATCC10864_003729Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003729-T1.exon1ATCC10864_003729-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_003729-T1.exon2ATCC10864_003729-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_003729-T1.exon3ATCC10864_003729-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003729-T1.cdsATCC10864_003729-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_003729-T1ATCC10864_003729-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR005706
InterProIPR001865
PFAMPF00318
InterProIPR023591
Properties
Property NameValue
NoteBUSCO:EOG09263J7D
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000068supercontigMCQH01000068:450346..451601 +
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