You are here

Home

ATCC10864_004280-T1, ATCC10864_004280-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004280-T1
Unique NameATCC10864_004280-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:197218..198891+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004280-T1 ID=ATCC10864_004280-T1|Name=ATCC10864_004280-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1674bp|location=Sequence derived from alignment at MCQH01000073:197218..198891+ (Aspergillus niger ATCC 10864)
ATGGCGACTCTTCTACCTCCCCCGTCGAAGCGTCAGAGGACAGAGAATGC
TGAGCGGGCCCGCCTGCAGCAGGAGATCCAGAGTGTTCCAGAGAACCTGG
GTAGCATTCGTGTGCAATTCTTCGACCAGGCGACGGGATCTGCGACCGGG
CCGGCGGTGTCCGTTCCAGTTGCTGATGCCAGTGTGAAGAATCTCGAGAC
TCTTTTGAATACGTTACAAGGCAATGTAGGTATGCAGCAAGGCATTGTTC
AGCATATACCAGAGACTAATAGATTTCTTTTTGCGCCGCAGGAAGAAGAT
GAGCGAGTACCGTACCGGTTCACATACCAATCCGATGGCAAAGACAAAAA
CGACCAGACAATCGATATCCTCTCTGACTTGTACCACTCCCTCTTGAAGC
CCGGCCTGAAGACAACCGAAGATACTGTACATCTCTACTTCACTCCCCAG
GCTGTGTTCCGCGTCAAAGCCGTTTCACGATGCTCCGCTGCGATCGCCGG
ACACGGCGAGGCAATTCTTGCGACCAGCTTCTCCCCTGTTAACTCGTCCA
CAATGGTTACCGGCAGCGGTGACTCTACAGCTCGCATCTGGGATTGCGAC
ACTGGAACTCCTCTGCACACTCTGAAGGGCCATACCAGCTGGGTGCTGGC
GGTCAGCTACTCGCCCAACGGCGCAATGATTGCGACGGGAAGCATGGACA
ATACCGTGCGCTTCTGGGACGCAAAGAAGGGAACCCCGTTGGGCGCGCCC
TTGAAGGGACACGCCAAATGGATCACCAGTCTGGCCTGGGAACCATACCA
TCTTCAGCAGCCCGGCCGGCCGCGCCTGGCGTCCGCGTCCAAGGACTCGA
CAGTCCGCATATGGGACGTGGTCTCGAAACGCATCGACACCGTTCTCACC
GGGCACAAGGGCTCCGTGACCTGCGTCCGCTGGGGCGGAACCGGGAACAT
CTACACTGCTTCTCACGACAAGACCATCAAGGTATGGAATGCTCAGAACG
GTACCCTGATCCAGACCCTTTCTGCGCACGCCCACCGCGTCAACCACCTG
GCCCTGTCTACCGACTTTGTCCTCCGCACTGCGTACCACGACCACACCGG
CAAGGTGCCGCAGGCCGATGCCGAGAAGGTCGCGGCAGCCAAGCAGCGAT
TCGAGCAGGCGGCGACCATCAACAATAAGATCGTCGAGAAGCTTGTGTCA
GCGAGTGACGACTTCACCATGTACTTGTGGGAGCCGGTTAATTCGAGTAA
GCCAATTGCGCGACTGCTGGGACACCAGAAGGAGGTGAACCATGTGACGT
TCTCGCCGGACATGGCGTACATTGCGTCCGCGGGATTCGACAACCATGTT
AAGCTGTGGAACGCCCGTGACGGGAAGTGAGTTTTTACCACAGCTTCAAA
ATGTGACATACAAGTACTAATGGACAATAGGTTTATCACGACACTCCGCG
GCCACGTCGGCGCCGTGTATCAGTGCTGCTTCTCGGCTGATTCCCGGCTG
CTGGTCTCGTCGTCCAAGGACACAACGCTGAAGGTATGGAATGTGCGGAC
GGGCAAGTTGCAAGAGGATCTGCCGGGCCACAAGGACGAGGTGTTTGCAG
TAGATTGGAGTCCGGATGGACAGAAGGTGGGAAGTGGCGGGAAAGACAAG
GCGGTGCGGATATGGAGGAATTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000073:197218..198891+

>ATCC10864_004280-T1 ID=ATCC10864_004280-T1|Name=ATCC10864_004280-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4662bp|location=Sequence derived from alignment at MCQH01000073:197218..198891+ (Aspergillus niger ATCC 10864)
ATGGCGACTCTTCTACCTCCCCCGTCGAAGCGTCAGAGGACAGAGAATGC
TGAGCGGGCCCGCCTGCAGCAGGAGATCCAGAGTGTTCCAGAGAACCTGG
GTAGCATTCGTGTGCAATTCTTCGACCAGGCGACGGGATCTGCGACCGGG
CCGGCGGTGTCCGTTCCAGTTGCTGATGCCAGTGTGAAGAATCTCGAGAC
TCTTTTGAATACGTTACAAGGCAATGAAGAAGATGAGCGAGTACCGTACC
GGTTCACATACCAATCCGATGGCAAAGACAAAAACGACCAGACAATCGAT
ATCCTCTCTGACTTGTACCACTCCCTCTTGAAGCCCGGCCTGAAGACAAC
CGAAGATACTGTACATCTCTACTTCACTCCCCAGGCTGTGTTCCGCGTCA
AAGCCGTTTCACGATGCTCCGCTGCGATCGCCGGACACGGCGAGGCAATT
CTTGCGACCAGCTTCTCCCCTGTTAACTCGTCCACAATGGTTACCGGCAG
CGGTGACTCTACAGCTCGCATCTGGGATTGCGACACTGGAACTCCTCTGC
ACACTCTGAAGGGCCATACCAGCTGGGTGCTGGCGGTCAGCTACTCGCCC
AACGGCGCAATGATTGCGACGGGAAGCATGGACAATACCGTGCGCTTCTG
GGACGCAAAGAAGGGAACCCCGTTGGGCGCGCCCTTGAAGGGACACGCCA
AATGGATCACCAGTCTGGCCTGGGAACCATACCATCTTCAGCAGCCCGGC
CGGCCGCGCCTGGCGTCCGCGTCCAAGGACTCGACAGTCCGCATATGGGA
CGTGGTCTCGAAACGCATCGACACCGTTCTCACCGGGCACAAGGGCTCCG
TGACCTGCGTCCGCTGGGGCGGAACCGGGAACATCTACACTGCTTCTCAC
GACAAGACCATCAAGGTATGGAATGCTCAGAACGGTACCCTGATCCAGAC
CCTTTCTGCGCACGCCCACCGCGTCAACCACCTGGCCCTGTCTACCGACT
TTGTCCTCCGCACTGCGTACCACGACCACACCGGCAAGGTGCCGCAGGCC
GATGCCGAGAAGGTCGCGGCAGCCAAGCAGCGATTCGAGCAGGCGGCGAC
CATCAACAATAAGATCGTCGAGAAGCTTGTGTCAGCGAGTGACGACTTCA
CCATGTACTTGTGGGAGCCGGTTAATTCGAGTAAGCCAATTGCGCGACTG
CTGGGACACCAGAAGGAGGTGAACCATGTGACGTTCTCGCCGGACATGGC
GTACATTGCGTCCGCGGGATTCGACAACCATGTTAAGCTGTGGAACGCCC
GTGACGGGAAGTTTATCACGACACTCCGCGGCCACGTCGGCGCCGTGTAT
CAGTGCTGCTTCTCGGCTGATTCCCGGCTGCTGGTCTCGTCGTCCAAGGA
CACAACGCTGAAGGTATGGAATGTGCGGACGGGCAAGTTGCAAGAGGATC
TGCCGGGCCACAAGGACGAGGTGTTTGCAGTAGATTGGAGTCCGGATGGA
CAGAAGGTGGGAAGTGGCGGGAAAGACAAGGCGGTGCGGATATGGAGGAA
TTAGATGGCGACTCTTCTACCTCCCCCGTCGAAGCGTCAGAGGACAGAGA
ATGCTGAGCGGGCCCGCCTGCAGCAGGAGATCCAGAGTGTTCCAGAGAAC
CTGGGTAGCATTCGTGTGCAATTCTTCGACCAGGCGACGGGATCTGCGAC
CGGGCCGGCGGTGTCCGTTCCAGTTGCTGATGCCAGTGTGAAGAATCTCG
AGACTCTTTTGAATACGTTACAAGGCAATGAAGAAGATGAGCGAGTACCG
TACCGGTTCACATACCAATCCGATGGCAAAGACAAAAACGACCAGACAAT
CGATATCCTCTCTGACTTGTACCACTCCCTCTTGAAGCCCGGCCTGAAGA
CAACCGAAGATACTGTACATCTCTACTTCACTCCCCAGGCTGTGTTCCGC
GTCAAAGCCGTTTCACGATGCTCCGCTGCGATCGCCGGACACGGCGAGGC
AATTCTTGCGACCAGCTTCTCCCCTGTTAACTCGTCCACAATGGTTACCG
GCAGCGGTGACTCTACAGCTCGCATCTGGGATTGCGACACTGGAACTCCT
CTGCACACTCTGAAGGGCCATACCAGCTGGGTGCTGGCGGTCAGCTACTC
GCCCAACGGCGCAATGATTGCGACGGGAAGCATGGACAATACCGTGCGCT
TCTGGGACGCAAAGAAGGGAACCCCGTTGGGCGCGCCCTTGAAGGGACAC
GCCAAATGGATCACCAGTCTGGCCTGGGAACCATACCATCTTCAGCAGCC
CGGCCGGCCGCGCCTGGCGTCCGCGTCCAAGGACTCGACAGTCCGCATAT
GGGACGTGGTCTCGAAACGCATCGACACCGTTCTCACCGGGCACAAGGGC
TCCGTGACCTGCGTCCGCTGGGGCGGAACCGGGAACATCTACACTGCTTC
TCACGACAAGACCATCAAGGTATGGAATGCTCAGAACGGTACCCTGATCC
AGACCCTTTCTGCGCACGCCCACCGCGTCAACCACCTGGCCCTGTCTACC
GACTTTGTCCTCCGCACTGCGTACCACGACCACACCGGCAAGGTGCCGCA
GGCCGATGCCGAGAAGGTCGCGGCAGCCAAGCAGCGATTCGAGCAGGCGG
CGACCATCAACAATAAGATCGTCGAGAAGCTTGTGTCAGCGAGTGACGAC
TTCACCATGTACTTGTGGGAGCCGGTTAATTCGAGTAAGCCAATTGCGCG
ACTGCTGGGACACCAGAAGGAGGTGAACCATGTGACGTTCTCGCCGGACA
TGGCGTACATTGCGTCCGCGGGATTCGACAACCATGTTAAGCTGTGGAAC
GCCCGTGACGGGAAGTTTATCACGACACTCCGCGGCCACGTCGGCGCCGT
GTATCAGTGCTGCTTCTCGGCTGATTCCCGGCTGCTGGTCTCGTCGTCCA
AGGACACAACGCTGAAGGTATGGAATGTGCGGACGGGCAAGTTGCAAGAG
GATCTGCCGGGCCACAAGGACGAGGTGTTTGCAGTAGATTGGAGTCCGGA
TGGACAGAAGGTGGGAAGTGGCGGGAAAGACAAGGCGGTGCGGATATGGA
GGAATTAGATGGCGACTCTTCTACCTCCCCCGTCGAAGCGTCAGAGGACA
GAGAATGCTGAGCGGGCCCGCCTGCAGCAGGAGATCCAGAGTGTTCCAGA
GAACCTGGGTAGCATTCGTGTGCAATTCTTCGACCAGGCGACGGGATCTG
CGACCGGGCCGGCGGTGTCCGTTCCAGTTGCTGATGCCAGTGTGAAGAAT
CTCGAGACTCTTTTGAATACGTTACAAGGCAATGAAGAAGATGAGCGAGT
ACCGTACCGGTTCACATACCAATCCGATGGCAAAGACAAAAACGACCAGA
CAATCGATATCCTCTCTGACTTGTACCACTCCCTCTTGAAGCCCGGCCTG
AAGACAACCGAAGATACTGTACATCTCTACTTCACTCCCCAGGCTGTGTT
CCGCGTCAAAGCCGTTTCACGATGCTCCGCTGCGATCGCCGGACACGGCG
AGGCAATTCTTGCGACCAGCTTCTCCCCTGTTAACTCGTCCACAATGGTT
ACCGGCAGCGGTGACTCTACAGCTCGCATCTGGGATTGCGACACTGGAAC
TCCTCTGCACACTCTGAAGGGCCATACCAGCTGGGTGCTGGCGGTCAGCT
ACTCGCCCAACGGCGCAATGATTGCGACGGGAAGCATGGACAATACCGTG
CGCTTCTGGGACGCAAAGAAGGGAACCCCGTTGGGCGCGCCCTTGAAGGG
ACACGCCAAATGGATCACCAGTCTGGCCTGGGAACCATACCATCTTCAGC
AGCCCGGCCGGCCGCGCCTGGCGTCCGCGTCCAAGGACTCGACAGTCCGC
ATATGGGACGTGGTCTCGAAACGCATCGACACCGTTCTCACCGGGCACAA
GGGCTCCGTGACCTGCGTCCGCTGGGGCGGAACCGGGAACATCTACACTG
CTTCTCACGACAAGACCATCAAGGTATGGAATGCTCAGAACGGTACCCTG
ATCCAGACCCTTTCTGCGCACGCCCACCGCGTCAACCACCTGGCCCTGTC
TACCGACTTTGTCCTCCGCACTGCGTACCACGACCACACCGGCAAGGTGC
CGCAGGCCGATGCCGAGAAGGTCGCGGCAGCCAAGCAGCGATTCGAGCAG
GCGGCGACCATCAACAATAAGATCGTCGAGAAGCTTGTGTCAGCGAGTGA
CGACTTCACCATGTACTTGTGGGAGCCGGTTAATTCGAGTAAGCCAATTG
CGCGACTGCTGGGACACCAGAAGGAGGTGAACCATGTGACGTTCTCGCCG
GACATGGCGTACATTGCGTCCGCGGGATTCGACAACCATGTTAAGCTGTG
GAACGCCCGTGACGGGAAGTTTATCACGACACTCCGCGGCCACGTCGGCG
CCGTGTATCAGTGCTGCTTCTCGGCTGATTCCCGGCTGCTGGTCTCGTCG
TCCAAGGACACAACGCTGAAGGTATGGAATGTGCGGACGGGCAAGTTGCA
AGAGGATCTGCCGGGCCACAAGGACGAGGTGTTTGCAGTAGATTGGAGTC
CGGATGGACAGAAGGTGGGAAGTGGCGGGAAAGACAAGGCGGTGCGGATA
TGGAGGAATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004280ATCC10864_004280Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004280-T1.exon1ATCC10864_004280-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004280-T1.exon2ATCC10864_004280-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004280-T1.exon3ATCC10864_004280-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004280-T1.cdsATCC10864_004280-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004280-T1ATCC10864_004280-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
PFAMPF08154
InterProIPR011047
InterProIPR017986
InterProIPR019775
InterProIPR001680
InterProIPR012972
InterProIPR001632
InterProIPR036322
InterProIPR020472
PFAMPF00400
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:197218..198891 +
Powered by Drupal