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ATCC10864_004300-T1, ATCC10864_004300-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004300-T1
Unique NameATCC10864_004300-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000073:251012..252523+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004300-T1 ID=ATCC10864_004300-T1|Name=ATCC10864_004300-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1512bp|location=Sequence derived from alignment at MCQH01000073:251012..252523+ (Aspergillus niger ATCC 10864)
ATGGTGGTGCCAGGCTGGATATGGGCGGTCTTTCTGACCATATTTGTCTC
CTTTCAGAGAACAGTGACGGCGCTGCAGCTGGACATTAACGATGAACGTA
AGTGTTCTCGACTCGTGCAGGAATGACGCACACAGGTGCAGGTACTGATC
ATTGCGCAAATATAGAATCTATCAAAGATGCCGCCAGGACCACGGCCTTC
AACATGATGAGCTACTATCATGGCAACGAATCGGGCCAAACGCCAGGAAA
GCTGCCCGATACCTGGTGGGAAGGTGGTGCTATGTTCATGACGTTGATTC
AGTACTGGTACTGGACTGGCGACACATCCTATAACGAGGTGACCACCCAG
GGTATGCTCTGGCAGAAGGGCGACAACGACTACTTTCCAGCCAACGATAG
TAACTATCTCGGGAACGACGACCAGGTCTTCTGGGGTCTAGCCGCCATGA
CGGCTGCAGAACTAAACTATCCCGAACAAGATGGTCAGCCATCGTGGCTG
TCGCTCGCCCAAGGTGTCTTCAACACCCAGGTCCCCCGATGGGATACGAC
CAGCTGCCAGGGTGGACTTCGTTGGCAGATTTGGCCTTACCAGGCTGGTT
ATACCACCAAGAACGCCATCTCGAACGGAGGTCTGTTTCAATTAGCCGCT
CGTCTGGGACGCTACACCAACAACGATACATACACCGACTGGGCAGAAAA
GATTTGGGACTGGAGTGCGACAACGCCGCTGTTGCAGACGGAGGACTGGT
ACATTGCCGACACAACCACCACAGAGGCAAACTGCAAGGATCATGGTGAT
ATACAGTGGACGTATAATTATGGAACCTACCTCAGCGGGGCCGCATACAT
GTACAATCTGGTCAGCACCTATTCCTCCAATCTGCAAATTTAATCCCTGG
CTAATCAGATTCTAGACCAATGGCGCCGACAAATGGAAGAAAGGTCTCGA
CGGTCTGCTTGCAAGTACCTTCTCAAGGTTCTTCCCGAAGGAATACGGCA
GCAACATTATGTCCGAGATCTCCTGTGAGCCCAACATGATGTGCGACCGG
AATCAGGACTGCTTCAAAGGTTTCTTGTCCTCCTGGCTTACCTTTACTAC
AACCATTGCGCCCTACACTGCCGATCAGATCCTCCCGAAGATCCAGCAAT
CCGCCCTAGCAGCGGCAAAGCAATGCTCGGGAGGCGATTCCGGCACTCAG
TGCGGGCGGCGGTGGTACCAAGCGCAGTGGGATGGCGAGACATCGCTCGA
AAGTGATATGAGTGCCCTGAGTGTCTTCTCGTCGAATATGATCACGCATC
GGCAAAGTCAAGGTGGCCAATCTCAGGGTCCGTTGACGTCGGACACTGGC
GGCACCAGCCAAAGCAACCCTAATGCAGGAACCGGTCCAAAGGATGCACC
CAATAAGCTGCCCGACATCACAACCGGAGACCGTGCAGGTGCCTCCATCC
TTACTGTCCTCTTTGTCGGCAGCTGGGCTGGTGCTATTACCTGGCTGGTC
TATGGAGGTTGA
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Coding sequence (CDS) from alignment at MCQH01000073:251012..252523+

>ATCC10864_004300-T1 ID=ATCC10864_004300-T1|Name=ATCC10864_004300-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4167bp|location=Sequence derived from alignment at MCQH01000073:251012..252523+ (Aspergillus niger ATCC 10864)
ATGGTGGTGCCAGGCTGGATATGGGCGGTCTTTCTGACCATATTTGTCTC
CTTTCAGAGAACAGTGACGGCGCTGCAGCTGGACATTAACGATGAACAAT
CTATCAAAGATGCCGCCAGGACCACGGCCTTCAACATGATGAGCTACTAT
CATGGCAACGAATCGGGCCAAACGCCAGGAAAGCTGCCCGATACCTGGTG
GGAAGGTGGTGCTATGTTCATGACGTTGATTCAGTACTGGTACTGGACTG
GCGACACATCCTATAACGAGGTGACCACCCAGGGTATGCTCTGGCAGAAG
GGCGACAACGACTACTTTCCAGCCAACGATAGTAACTATCTCGGGAACGA
CGACCAGGTCTTCTGGGGTCTAGCCGCCATGACGGCTGCAGAACTAAACT
ATCCCGAACAAGATGGTCAGCCATCGTGGCTGTCGCTCGCCCAAGGTGTC
TTCAACACCCAGGTCCCCCGATGGGATACGACCAGCTGCCAGGGTGGACT
TCGTTGGCAGATTTGGCCTTACCAGGCTGGTTATACCACCAAGAACGCCA
TCTCGAACGGAGGTCTGTTTCAATTAGCCGCTCGTCTGGGACGCTACACC
AACAACGATACATACACCGACTGGGCAGAAAAGATTTGGGACTGGAGTGC
GACAACGCCGCTGTTGCAGACGGAGGACTGGTACATTGCCGACACAACCA
CCACAGAGGCAAACTGCAAGGATCATGGTGATATACAGTGGACGTATAAT
TATGGAACCTACCTCAGCGGGGCCGCATACATGTACAATCTGACCAATGG
CGCCGACAAATGGAAGAAAGGTCTCGACGGTCTGCTTGCAAGTACCTTCT
CAAGGTTCTTCCCGAAGGAATACGGCAGCAACATTATGTCCGAGATCTCC
TGTGAGCCCAACATGATGTGCGACCGGAATCAGGACTGCTTCAAAGGTTT
CTTGTCCTCCTGGCTTACCTTTACTACAACCATTGCGCCCTACACTGCCG
ATCAGATCCTCCCGAAGATCCAGCAATCCGCCCTAGCAGCGGCAAAGCAA
TGCTCGGGAGGCGATTCCGGCACTCAGTGCGGGCGGCGGTGGTACCAAGC
GCAGTGGGATGGCGAGACATCGCTCGAAAGTGATATGAGTGCCCTGAGTG
TCTTCTCGTCGAATATGATCACGCATCGGCAAAGTCAAGGTGGCCAATCT
CAGGGTCCGTTGACGTCGGACACTGGCGGCACCAGCCAAAGCAACCCTAA
TGCAGGAACCGGTCCAAAGGATGCACCCAATAAGCTGCCCGACATCACAA
CCGGAGACCGTGCAGGTGCCTCCATCCTTACTGTCCTCTTTGTCGGCAGC
TGGGCTGGTGCTATTACCTGGCTGGTCTATGGAGGTTGAATGGTGGTGCC
AGGCTGGATATGGGCGGTCTTTCTGACCATATTTGTCTCCTTTCAGAGAA
CAGTGACGGCGCTGCAGCTGGACATTAACGATGAACAATCTATCAAAGAT
GCCGCCAGGACCACGGCCTTCAACATGATGAGCTACTATCATGGCAACGA
ATCGGGCCAAACGCCAGGAAAGCTGCCCGATACCTGGTGGGAAGGTGGTG
CTATGTTCATGACGTTGATTCAGTACTGGTACTGGACTGGCGACACATCC
TATAACGAGGTGACCACCCAGGGTATGCTCTGGCAGAAGGGCGACAACGA
CTACTTTCCAGCCAACGATAGTAACTATCTCGGGAACGACGACCAGGTCT
TCTGGGGTCTAGCCGCCATGACGGCTGCAGAACTAAACTATCCCGAACAA
GATGGTCAGCCATCGTGGCTGTCGCTCGCCCAAGGTGTCTTCAACACCCA
GGTCCCCCGATGGGATACGACCAGCTGCCAGGGTGGACTTCGTTGGCAGA
TTTGGCCTTACCAGGCTGGTTATACCACCAAGAACGCCATCTCGAACGGA
GGTCTGTTTCAATTAGCCGCTCGTCTGGGACGCTACACCAACAACGATAC
ATACACCGACTGGGCAGAAAAGATTTGGGACTGGAGTGCGACAACGCCGC
TGTTGCAGACGGAGGACTGGTACATTGCCGACACAACCACCACAGAGGCA
AACTGCAAGGATCATGGTGATATACAGTGGACGTATAATTATGGAACCTA
CCTCAGCGGGGCCGCATACATGTACAATCTGACCAATGGCGCCGACAAAT
GGAAGAAAGGTCTCGACGGTCTGCTTGCAAGTACCTTCTCAAGGTTCTTC
CCGAAGGAATACGGCAGCAACATTATGTCCGAGATCTCCTGTGAGCCCAA
CATGATGTGCGACCGGAATCAGGACTGCTTCAAAGGTTTCTTGTCCTCCT
GGCTTACCTTTACTACAACCATTGCGCCCTACACTGCCGATCAGATCCTC
CCGAAGATCCAGCAATCCGCCCTAGCAGCGGCAAAGCAATGCTCGGGAGG
CGATTCCGGCACTCAGTGCGGGCGGCGGTGGTACCAAGCGCAGTGGGATG
GCGAGACATCGCTCGAAAGTGATATGAGTGCCCTGAGTGTCTTCTCGTCG
AATATGATCACGCATCGGCAAAGTCAAGGTGGCCAATCTCAGGGTCCGTT
GACGTCGGACACTGGCGGCACCAGCCAAAGCAACCCTAATGCAGGAACCG
GTCCAAAGGATGCACCCAATAAGCTGCCCGACATCACAACCGGAGACCGT
GCAGGTGCCTCCATCCTTACTGTCCTCTTTGTCGGCAGCTGGGCTGGTGC
TATTACCTGGCTGGTCTATGGAGGTTGAATGGTGGTGCCAGGCTGGATAT
GGGCGGTCTTTCTGACCATATTTGTCTCCTTTCAGAGAACAGTGACGGCG
CTGCAGCTGGACATTAACGATGAACAATCTATCAAAGATGCCGCCAGGAC
CACGGCCTTCAACATGATGAGCTACTATCATGGCAACGAATCGGGCCAAA
CGCCAGGAAAGCTGCCCGATACCTGGTGGGAAGGTGGTGCTATGTTCATG
ACGTTGATTCAGTACTGGTACTGGACTGGCGACACATCCTATAACGAGGT
GACCACCCAGGGTATGCTCTGGCAGAAGGGCGACAACGACTACTTTCCAG
CCAACGATAGTAACTATCTCGGGAACGACGACCAGGTCTTCTGGGGTCTA
GCCGCCATGACGGCTGCAGAACTAAACTATCCCGAACAAGATGGTCAGCC
ATCGTGGCTGTCGCTCGCCCAAGGTGTCTTCAACACCCAGGTCCCCCGAT
GGGATACGACCAGCTGCCAGGGTGGACTTCGTTGGCAGATTTGGCCTTAC
CAGGCTGGTTATACCACCAAGAACGCCATCTCGAACGGAGGTCTGTTTCA
ATTAGCCGCTCGTCTGGGACGCTACACCAACAACGATACATACACCGACT
GGGCAGAAAAGATTTGGGACTGGAGTGCGACAACGCCGCTGTTGCAGACG
GAGGACTGGTACATTGCCGACACAACCACCACAGAGGCAAACTGCAAGGA
TCATGGTGATATACAGTGGACGTATAATTATGGAACCTACCTCAGCGGGG
CCGCATACATGTACAATCTGACCAATGGCGCCGACAAATGGAAGAAAGGT
CTCGACGGTCTGCTTGCAAGTACCTTCTCAAGGTTCTTCCCGAAGGAATA
CGGCAGCAACATTATGTCCGAGATCTCCTGTGAGCCCAACATGATGTGCG
ACCGGAATCAGGACTGCTTCAAAGGTTTCTTGTCCTCCTGGCTTACCTTT
ACTACAACCATTGCGCCCTACACTGCCGATCAGATCCTCCCGAAGATCCA
GCAATCCGCCCTAGCAGCGGCAAAGCAATGCTCGGGAGGCGATTCCGGCA
CTCAGTGCGGGCGGCGGTGGTACCAAGCGCAGTGGGATGGCGAGACATCG
CTCGAAAGTGATATGAGTGCCCTGAGTGTCTTCTCGTCGAATATGATCAC
GCATCGGCAAAGTCAAGGTGGCCAATCTCAGGGTCCGTTGACGTCGGACA
CTGGCGGCACCAGCCAAAGCAACCCTAATGCAGGAACCGGTCCAAAGGAT
GCACCCAATAAGCTGCCCGACATCACAACCGGAGACCGTGCAGGTGCCTC
CATCCTTACTGTCCTCTTTGTCGGCAGCTGGGCTGGTGCTATTACCTGGC
TGGTCTATGGAGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008496mannan endo-1,6-alpha-mannosidase activity
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004300ATCC10864_004300Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004300-T1.exon1ATCC10864_004300-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004300-T1.exon2ATCC10864_004300-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004300-T1.exon3ATCC10864_004300-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004300-T1.cdsATCC10864_004300-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004300-T1ATCC10864_004300-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03663
InterProIPR008928
InterProIPR014480
InterProIPR005198
Properties
Property NameValue
NoteSECRETED:SignalP(1-24)
NoteCAZy:GH76
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000073supercontigMCQH01000073:251012..252523 +
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