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ATCC10864_004524-T1, ATCC10864_004524-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004524-T1
Unique NameATCC10864_004524-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000074:222011..223592-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004524-T1 ID=ATCC10864_004524-T1|Name=ATCC10864_004524-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1582bp|location=Sequence derived from alignment at MCQH01000074:222011..223592- (Aspergillus niger ATCC 10864)
ATGAAGCTTTTCTCTATTCTACTTGTGGCCTTGGTCTCGTTGGTCAGCGG
TGCTCACCACCACCGCCACCGCCACATGAATGATCCAGCTCCAGCTAGTT
TTCCCGGACCTCACCACCAGCACCATGGCATCCCACCCCACAAGCTGGTA
GCGCGCAACACCAGCGCGGAATACAAGTCCATTGCTTACTTTGTTAACTG
GGTGAGTCACCCCATCCGCCTGTCATACAGATGCTTGGTCTTTTACTCAT
CGAGCAAAGGCAATTTACGGCAGGAACCACAATCCCCAGGACATCCCCAT
CGATAAACTGACCCACATCCTCTACGCGTTCGCCAACGTCCGCGCCAACG
GCGAAGTCTACCTTTCCGATCCATGGTCCGACATCGATAAGCGCTTTCCT
GGTGATTCATGGAGTGATACCGGAAACAACGTTTACGGATGTGTTAAGCA
ACTTAATCTCTTAAAGCAGAAGAATCGTAATCTCAAGGTGCTTCTATCGA
TCGGAGGCTGGACATACTCGAGCAATTTTGTGACACCAGCGAGTACAGAT
CAAGGCAGGAAGACTTTCGCTTCTTCGGCTGTCAAGTTGCTGGCCGACTT
GGGCTTTGATGGATTAGATATTGATTGGGAGGTATATATCTATATGATGG
TTATTGGTTCTTCCTTTATAACCGTGCTAACATGTCTACTTCTCTGTAGT
ACCCTGCCAATGAAGCCCAGGCTACAGACATGGTTCTACTCCTACGCGAG
ATCCGAGAGGTAGGCTTTGCCTTGCCCCTACCATACCGATCAATCACCCA
CTAACCATGAGCAGGAACTAGACGAATACGGCCGCGAACACGGCAACGGA
ACCCATTTCCTCCTAAGCATAGCCACCTCAGCAGGTCCCTCAAAATACAA
TACCCTCCACATATCCAGTATGAACCTCTACCTCGACTTCTGGAACCTAA
TGGCCTACGACTACGCCGGCAGCTGGGATGCAACTGCAGGACACCAGGCC
AACCTCTACCCATTACGGGATGACCCTGTCTCAACCCCCTTCAACACGGA
TCAAGCCATCTCCGCGTACCTGACCGCCGGTGTTCCCGCCCATAAACTCA
TTCTCGGTATGCCGCTCTATGGGCGCGCCTTCACAAACACCGACGGACCG
GGCAAGCCGTTTAATGGTGTTGGTCAGGGAAGCTGGGAGAATGGGGTCTG
GGACTACAAAGCGCTTCCTCCTGCAGGGGCTAGTGTTTCTGAGTTGAGAA
GTATTGGTGCGAGCTACTCGTATGATGCTGGCAAAAAGACGATGATTAGT
TATGATACCCCTGCTGTTGCGAGGCAGAAGGCGGATTATATCAGAAGTAA
AGGTCTCGGGGGTGCGATGTGGTGGGAGACTTCTGGGGACAAGGTGGGAG
TGGAGAGTTTGATTTCTACGGTAAGATGGTTTATATCCTTTCTTCTCTGG
AGGAGAGTTGTGACTGACGAAGCAATATAGGTCGTGGATTCACTAGGTGG
TATTGGCGCTCTGGATAAGTCGGTCAATCACCTGGAGTATCCCGAGTCGC
AGTATGACAATGTGAAGAAGGGGTTCCATTGA
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Coding sequence (CDS) from alignment at MCQH01000074:222011..223592-

>ATCC10864_004524-T1 ID=ATCC10864_004524-T1|Name=ATCC10864_004524-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6705bp|location=Sequence derived from alignment at MCQH01000074:222011..223592- (Aspergillus niger ATCC 10864)
GTCGTGGATTCACTAGGTGGTATTGGCGCTCTGGATAAGTCGGTCAATCA
CCTGGAGTATCCCGAGTCGCAGTATGACAATGTGAAGAAGGGGTTCCATT
GAGAACTAGACGAATACGGCCGCGAACACGGCAACGGAACCCATTTCCTC
CTAAGCATAGCCACCTCAGCAGGTCCCTCAAAATACAATACCCTCCACAT
ATCCAGTATGAACCTCTACCTCGACTTCTGGAACCTAATGGCCTACGACT
ACGCCGGCAGCTGGGATGCAACTGCAGGACACCAGGCCAACCTCTACCCA
TTACGGGATGACCCTGTCTCAACCCCCTTCAACACGGATCAAGCCATCTC
CGCGTACCTGACCGCCGGTGTTCCCGCCCATAAACTCATTCTCGGTATGC
CGCTCTATGGGCGCGCCTTCACAAACACCGACGGACCGGGCAAGCCGTTT
AATGGTGTTGGTCAGGGAAGCTGGGAGAATGGGGTCTGGGACTACAAAGC
GCTTCCTCCTGCAGGGGCTAGTGTTTCTGAGTTGAGAAGTATTGGTGCGA
GCTACTCGTATGATGCTGGCAAAAAGACGATGATTAGTTATGATACCCCT
GCTGTTGCGAGGCAGAAGGCGGATTATATCAGAAGTAAAGGTCTCGGGGG
TGCGATGTGGTGGGAGACTTCTGGGGACAAGGTGGGAGTGGAGAGTTTGA
TTTCTACGTACCCTGCCAATGAAGCCCAGGCTACAGACATGGTTCTACTC
CTACGCGAGATCCGAGAGGCAATTTACGGCAGGAACCACAATCCCCAGGA
CATCCCCATCGATAAACTGACCCACATCCTCTACGCGTTCGCCAACGTCC
GCGCCAACGGCGAAGTCTACCTTTCCGATCCATGGTCCGACATCGATAAG
CGCTTTCCTGGTGATTCATGGAGTGATACCGGAAACAACGTTTACGGATG
TGTTAAGCAACTTAATCTCTTAAAGCAGAAGAATCGTAATCTCAAGGTGC
TTCTATCGATCGGAGGCTGGACATACTCGAGCAATTTTGTGACACCAGCG
AGTACAGATCAAGGCAGGAAGACTTTCGCTTCTTCGGCTGTCAAGTTGCT
GGCCGACTTGGGCTTTGATGGATTAGATATTGATTGGGAGATGAAGCTTT
TCTCTATTCTACTTGTGGCCTTGGTCTCGTTGGTCAGCGGTGCTCACCAC
CACCGCCACCGCCACATGAATGATCCAGCTCCAGCTAGTTTTCCCGGACC
TCACCACCAGCACCATGGCATCCCACCCCACAAGCTGGTAGCGCGCAACA
CCAGCGCGGAATACAAGTCCATTGCTTACTTTGTTAACTGGGTCGTGGAT
TCACTAGGTGGTATTGGCGCTCTGGATAAGTCGGTCAATCACCTGGAGTA
TCCCGAGTCGCAGTATGACAATGTGAAGAAGGGGTTCCATTGAGAACTAG
ACGAATACGGCCGCGAACACGGCAACGGAACCCATTTCCTCCTAAGCATA
GCCACCTCAGCAGGTCCCTCAAAATACAATACCCTCCACATATCCAGTAT
GAACCTCTACCTCGACTTCTGGAACCTAATGGCCTACGACTACGCCGGCA
GCTGGGATGCAACTGCAGGACACCAGGCCAACCTCTACCCATTACGGGAT
GACCCTGTCTCAACCCCCTTCAACACGGATCAAGCCATCTCCGCGTACCT
GACCGCCGGTGTTCCCGCCCATAAACTCATTCTCGGTATGCCGCTCTATG
GGCGCGCCTTCACAAACACCGACGGACCGGGCAAGCCGTTTAATGGTGTT
GGTCAGGGAAGCTGGGAGAATGGGGTCTGGGACTACAAAGCGCTTCCTCC
TGCAGGGGCTAGTGTTTCTGAGTTGAGAAGTATTGGTGCGAGCTACTCGT
ATGATGCTGGCAAAAAGACGATGATTAGTTATGATACCCCTGCTGTTGCG
AGGCAGAAGGCGGATTATATCAGAAGTAAAGGTCTCGGGGGTGCGATGTG
GTGGGAGACTTCTGGGGACAAGGTGGGAGTGGAGAGTTTGATTTCTACGT
ACCCTGCCAATGAAGCCCAGGCTACAGACATGGTTCTACTCCTACGCGAG
ATCCGAGAGGCAATTTACGGCAGGAACCACAATCCCCAGGACATCCCCAT
CGATAAACTGACCCACATCCTCTACGCGTTCGCCAACGTCCGCGCCAACG
GCGAAGTCTACCTTTCCGATCCATGGTCCGACATCGATAAGCGCTTTCCT
GGTGATTCATGGAGTGATACCGGAAACAACGTTTACGGATGTGTTAAGCA
ACTTAATCTCTTAAAGCAGAAGAATCGTAATCTCAAGGTGCTTCTATCGA
TCGGAGGCTGGACATACTCGAGCAATTTTGTGACACCAGCGAGTACAGAT
CAAGGCAGGAAGACTTTCGCTTCTTCGGCTGTCAAGTTGCTGGCCGACTT
GGGCTTTGATGGATTAGATATTGATTGGGAGATGAAGCTTTTCTCTATTC
TACTTGTGGCCTTGGTCTCGTTGGTCAGCGGTGCTCACCACCACCGCCAC
CGCCACATGAATGATCCAGCTCCAGCTAGTTTTCCCGGACCTCACCACCA
GCACCATGGCATCCCACCCCACAAGCTGGTAGCGCGCAACACCAGCGCGG
AATACAAGTCCATTGCTTACTTTGTTAACTGGGTCGTGGATTCACTAGGT
GGTATTGGCGCTCTGGATAAGTCGGTCAATCACCTGGAGTATCCCGAGTC
GCAGTATGACAATGTGAAGAAGGGGTTCCATTGAGAACTAGACGAATACG
GCCGCGAACACGGCAACGGAACCCATTTCCTCCTAAGCATAGCCACCTCA
GCAGGTCCCTCAAAATACAATACCCTCCACATATCCAGTATGAACCTCTA
CCTCGACTTCTGGAACCTAATGGCCTACGACTACGCCGGCAGCTGGGATG
CAACTGCAGGACACCAGGCCAACCTCTACCCATTACGGGATGACCCTGTC
TCAACCCCCTTCAACACGGATCAAGCCATCTCCGCGTACCTGACCGCCGG
TGTTCCCGCCCATAAACTCATTCTCGGTATGCCGCTCTATGGGCGCGCCT
TCACAAACACCGACGGACCGGGCAAGCCGTTTAATGGTGTTGGTCAGGGA
AGCTGGGAGAATGGGGTCTGGGACTACAAAGCGCTTCCTCCTGCAGGGGC
TAGTGTTTCTGAGTTGAGAAGTATTGGTGCGAGCTACTCGTATGATGCTG
GCAAAAAGACGATGATTAGTTATGATACCCCTGCTGTTGCGAGGCAGAAG
GCGGATTATATCAGAAGTAAAGGTCTCGGGGGTGCGATGTGGTGGGAGAC
TTCTGGGGACAAGGTGGGAGTGGAGAGTTTGATTTCTACGTACCCTGCCA
ATGAAGCCCAGGCTACAGACATGGTTCTACTCCTACGCGAGATCCGAGAG
GCAATTTACGGCAGGAACCACAATCCCCAGGACATCCCCATCGATAAACT
GACCCACATCCTCTACGCGTTCGCCAACGTCCGCGCCAACGGCGAAGTCT
ACCTTTCCGATCCATGGTCCGACATCGATAAGCGCTTTCCTGGTGATTCA
TGGAGTGATACCGGAAACAACGTTTACGGATGTGTTAAGCAACTTAATCT
CTTAAAGCAGAAGAATCGTAATCTCAAGGTGCTTCTATCGATCGGAGGCT
GGACATACTCGAGCAATTTTGTGACACCAGCGAGTACAGATCAAGGCAGG
AAGACTTTCGCTTCTTCGGCTGTCAAGTTGCTGGCCGACTTGGGCTTTGA
TGGATTAGATATTGATTGGGAGATGAAGCTTTTCTCTATTCTACTTGTGG
CCTTGGTCTCGTTGGTCAGCGGTGCTCACCACCACCGCCACCGCCACATG
AATGATCCAGCTCCAGCTAGTTTTCCCGGACCTCACCACCAGCACCATGG
CATCCCACCCCACAAGCTGGTAGCGCGCAACACCAGCGCGGAATACAAGT
CCATTGCTTACTTTGTTAACTGGGTCGTGGATTCACTAGGTGGTATTGGC
GCTCTGGATAAGTCGGTCAATCACCTGGAGTATCCCGAGTCGCAGTATGA
CAATGTGAAGAAGGGGTTCCATTGAGAACTAGACGAATACGGCCGCGAAC
ACGGCAACGGAACCCATTTCCTCCTAAGCATAGCCACCTCAGCAGGTCCC
TCAAAATACAATACCCTCCACATATCCAGTATGAACCTCTACCTCGACTT
CTGGAACCTAATGGCCTACGACTACGCCGGCAGCTGGGATGCAACTGCAG
GACACCAGGCCAACCTCTACCCATTACGGGATGACCCTGTCTCAACCCCC
TTCAACACGGATCAAGCCATCTCCGCGTACCTGACCGCCGGTGTTCCCGC
CCATAAACTCATTCTCGGTATGCCGCTCTATGGGCGCGCCTTCACAAACA
CCGACGGACCGGGCAAGCCGTTTAATGGTGTTGGTCAGGGAAGCTGGGAG
AATGGGGTCTGGGACTACAAAGCGCTTCCTCCTGCAGGGGCTAGTGTTTC
TGAGTTGAGAAGTATTGGTGCGAGCTACTCGTATGATGCTGGCAAAAAGA
CGATGATTAGTTATGATACCCCTGCTGTTGCGAGGCAGAAGGCGGATTAT
ATCAGAAGTAAAGGTCTCGGGGGTGCGATGTGGTGGGAGACTTCTGGGGA
CAAGGTGGGAGTGGAGAGTTTGATTTCTACGTACCCTGCCAATGAAGCCC
AGGCTACAGACATGGTTCTACTCCTACGCGAGATCCGAGAGGCAATTTAC
GGCAGGAACCACAATCCCCAGGACATCCCCATCGATAAACTGACCCACAT
CCTCTACGCGTTCGCCAACGTCCGCGCCAACGGCGAAGTCTACCTTTCCG
ATCCATGGTCCGACATCGATAAGCGCTTTCCTGGTGATTCATGGAGTGAT
ACCGGAAACAACGTTTACGGATGTGTTAAGCAACTTAATCTCTTAAAGCA
GAAGAATCGTAATCTCAAGGTGCTTCTATCGATCGGAGGCTGGACATACT
CGAGCAATTTTGTGACACCAGCGAGTACAGATCAAGGCAGGAAGACTTTC
GCTTCTTCGGCTGTCAAGTTGCTGGCCGACTTGGGCTTTGATGGATTAGA
TATTGATTGGGAGATGAAGCTTTTCTCTATTCTACTTGTGGCCTTGGTCT
CGTTGGTCAGCGGTGCTCACCACCACCGCCACCGCCACATGAATGATCCA
GCTCCAGCTAGTTTTCCCGGACCTCACCACCAGCACCATGGCATCCCACC
CCACAAGCTGGTAGCGCGCAACACCAGCGCGGAATACAAGTCCATTGCTT
ACTTTGTTAACTGGGTCGTGGATTCACTAGGTGGTATTGGCGCTCTGGAT
AAGTCGGTCAATCACCTGGAGTATCCCGAGTCGCAGTATGACAATGTGAA
GAAGGGGTTCCATTGAGAACTAGACGAATACGGCCGCGAACACGGCAACG
GAACCCATTTCCTCCTAAGCATAGCCACCTCAGCAGGTCCCTCAAAATAC
AATACCCTCCACATATCCAGTATGAACCTCTACCTCGACTTCTGGAACCT
AATGGCCTACGACTACGCCGGCAGCTGGGATGCAACTGCAGGACACCAGG
CCAACCTCTACCCATTACGGGATGACCCTGTCTCAACCCCCTTCAACACG
GATCAAGCCATCTCCGCGTACCTGACCGCCGGTGTTCCCGCCCATAAACT
CATTCTCGGTATGCCGCTCTATGGGCGCGCCTTCACAAACACCGACGGAC
CGGGCAAGCCGTTTAATGGTGTTGGTCAGGGAAGCTGGGAGAATGGGGTC
TGGGACTACAAAGCGCTTCCTCCTGCAGGGGCTAGTGTTTCTGAGTTGAG
AAGTATTGGTGCGAGCTACTCGTATGATGCTGGCAAAAAGACGATGATTA
GTTATGATACCCCTGCTGTTGCGAGGCAGAAGGCGGATTATATCAGAAGT
AAAGGTCTCGGGGGTGCGATGTGGTGGGAGACTTCTGGGGACAAGGTGGG
AGTGGAGAGTTTGATTTCTACGTACCCTGCCAATGAAGCCCAGGCTACAG
ACATGGTTCTACTCCTACGCGAGATCCGAGAGGCAATTTACGGCAGGAAC
CACAATCCCCAGGACATCCCCATCGATAAACTGACCCACATCCTCTACGC
GTTCGCCAACGTCCGCGCCAACGGCGAAGTCTACCTTTCCGATCCATGGT
CCGACATCGATAAGCGCTTTCCTGGTGATTCATGGAGTGATACCGGAAAC
AACGTTTACGGATGTGTTAAGCAACTTAATCTCTTAAAGCAGAAGAATCG
TAATCTCAAGGTGCTTCTATCGATCGGAGGCTGGACATACTCGAGCAATT
TTGTGACACCAGCGAGTACAGATCAAGGCAGGAAGACTTTCGCTTCTTCG
GCTGTCAAGTTGCTGGCCGACTTGGGCTTTGATGGATTAGATATTGATTG
GGAGATGAAGCTTTTCTCTATTCTACTTGTGGCCTTGGTCTCGTTGGTCA
GCGGTGCTCACCACCACCGCCACCGCCACATGAATGATCCAGCTCCAGCT
AGTTTTCCCGGACCTCACCACCAGCACCATGGCATCCCACCCCACAAGCT
GGTAGCGCGCAACACCAGCGCGGAATACAAGTCCATTGCTTACTTTGTTA
ACTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CHIB1ATCC10864_004524Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004524-T1ATCC10864_004524-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004524-T1.cdsATCC10864_004524-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004524-T1.exon5ATCC10864_004524-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_004524-T1.exon4ATCC10864_004524-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004524-T1.exon3ATCC10864_004524-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004524-T1.exon2ATCC10864_004524-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004524-T1.exon1ATCC10864_004524-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00704
InterProIPR011583
InterProIPR001579
InterProIPR001223
InterProIPR017853
InterProIPR029070
Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
NoteCAZy:GH18
ProductEndochitinase B1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000074supercontigMCQH01000074:222011..223592 -
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