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ATCC10864_004639-T1, ATCC10864_004639-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004639-T1
Unique NameATCC10864_004639-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000084:50843..51814-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004639-T1 ID=ATCC10864_004639-T1|Name=ATCC10864_004639-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=972bp|location=Sequence derived from alignment at MCQH01000084:50843..51814- (Aspergillus niger ATCC 10864)
ATGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGA
CGTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAGGTGAGAATTCCCC
CCCTATATTGCGATCACTTAACATCCCGCCGGGTGCTCGTGTAGTTTGCC
ATAGGATGCCCTTCTTGAAATGAGAAATGGTGTTACTGGGCGGCTCGAAA
CGAACTTTTTCTTTCGCCGGCGGATGGATGTGGCACAAACAGAGAGACTT
GAGAGAAGCCTCATGTGTCTTGCTATACACTCGTTGAACTTTGCTGAGAG
TGCATCAATATAGCTCCGTCAACTGAACGCTATCCACCGTGCTTCCCGCC
CTTCTCGCCCCGACAAGGCTCGTCGTCTCGGCTACAAGGCCAAGCAGGGC
TATGTTGTCTACCGTATCCGTGTGAGACGCGGTGGTCGTAAGAGACCCGC
TCCTAAGGGTGCCACCTACGGTATGTACAATTTTCGTCTTTGAGGGATTG
GAACCCAATCTAATTTGTTTGCGACTACAGGCAAGCCCACCAACATGGGT
ATCAACCAGCTCAAGTACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCG
TGTTGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAACTCCTACTGGATCA
ACCAGGACTCCACCTACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAG
CACAAGGCCATCCGCCGCGATGCTCGCATCAACTGGATCTGCAACGCTGT
CCACAAGGTTCGTTATGAATGCCATTGGGGATTATATGTTCTCATTGATT
ACACGTTACTGACCGGGAATGTGTTTCATAGCACCGCGAGGCCCGTGGTC
TTACCGCCACCGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACCGCTAC
AACAACACCCGCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAACACCCA
GAGCTACTGGCGTTACCGTTAA
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Coding sequence (CDS) from alignment at MCQH01000084:50843..51814-

>ATCC10864_004639-T1 ID=ATCC10864_004639-T1|Name=ATCC10864_004639-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2448bp|location=Sequence derived from alignment at MCQH01000084:50843..51814- (Aspergillus niger ATCC 10864)
CACCGCGAGGCCCGTGGTCTTACCGCCACCGGCAAGAAGTCCCGTGGTAT
CAACAAGGGCCACCGCTACAACAACACCCGCTCTGGCCGCCGCCACACCT
GGAAGCGCCAGAACACCCAGAGCTACTGGCGTTACCGTTAAGCAAGCCCA
CCAACATGGGTATCAACCAGCTCAAGTACCAGCGCGCTCTCCGTGCTACC
GCTGAGGAGCGTGTTGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAACTC
CTACTGGATCAACCAGGACTCCACCTACAAGTACTTCGAGGTCATCCTCG
TCGACCCCCAGCACAAGGCCATCCGCCGCGATGCTCGCATCAACTGGATC
TGCAACGCTGTCCACAAGCTCCGTCAACTGAACGCTATCCACCGTGCTTC
CCGCCCTTCTCGCCCCGACAAGGCTCGTCGTCTCGGCTACAAGGCCAAGC
AGGGCTATGTTGTCTACCGTATCCGTGTGAGACGCGGTGGTCGTAAGAGA
CCCGCTCCTAAGGGTGCCACCTACGATGGGTGCCCTCAAGTACGTGGAAG
AGATCCAGAAGAAGAAGCAGTCCGACGTGATTCGCTTCCTGCTGCGTGTC
CGTTGCTGGGAGCACCGCGAGGCCCGTGGTCTTACCGCCACCGGCAAGAA
GTCCCGTGGTATCAACAAGGGCCACCGCTACAACAACACCCGCTCTGGCC
GCCGCCACACCTGGAAGCGCCAGAACACCCAGAGCTACTGGCGTTACCGT
TAAGCAAGCCCACCAACATGGGTATCAACCAGCTCAAGTACCAGCGCGCT
CTCCGTGCTACCGCTGAGGAGCGTGTTGGCCGTCGCTGCGCCAACCTGCG
TGTCCTGAACTCCTACTGGATCAACCAGGACTCCACCTACAAGTACTTCG
AGGTCATCCTCGTCGACCCCCAGCACAAGGCCATCCGCCGCGATGCTCGC
ATCAACTGGATCTGCAACGCTGTCCACAAGCTCCGTCAACTGAACGCTAT
CCACCGTGCTTCCCGCCCTTCTCGCCCCGACAAGGCTCGTCGTCTCGGCT
ACAAGGCCAAGCAGGGCTATGTTGTCTACCGTATCCGTGTGAGACGCGGT
GGTCGTAAGAGACCCGCTCCTAAGGGTGCCACCTACGATGGGTGCCCTCA
AGTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGACGTGATTCGCTTC
CTGCTGCGTGTCCGTTGCTGGGAGCACCGCGAGGCCCGTGGTCTTACCGC
CACCGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACCGCTACAACAACA
CCCGCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAACACCCAGAGCTAC
TGGCGTTACCGTTAAGCAAGCCCACCAACATGGGTATCAACCAGCTCAAG
TACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCGTGTTGGCCGTCGCTG
CGCCAACCTGCGTGTCCTGAACTCCTACTGGATCAACCAGGACTCCACCT
ACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAGCACAAGGCCATCCGC
CGCGATGCTCGCATCAACTGGATCTGCAACGCTGTCCACAAGCTCCGTCA
ACTGAACGCTATCCACCGTGCTTCCCGCCCTTCTCGCCCCGACAAGGCTC
GTCGTCTCGGCTACAAGGCCAAGCAGGGCTATGTTGTCTACCGTATCCGT
GTGAGACGCGGTGGTCGTAAGAGACCCGCTCCTAAGGGTGCCACCTACGA
TGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGAC
GTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAGCACCGCGAGGCCCG
TGGTCTTACCGCCACCGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACC
GCTACAACAACACCCGCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAAC
ACCCAGAGCTACTGGCGTTACCGTTAAGCAAGCCCACCAACATGGGTATC
AACCAGCTCAAGTACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCGTGT
TGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAACTCCTACTGGATCAACC
AGGACTCCACCTACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAGCAC
AAGGCCATCCGCCGCGATGCTCGCATCAACTGGATCTGCAACGCTGTCCA
CAAGCTCCGTCAACTGAACGCTATCCACCGTGCTTCCCGCCCTTCTCGCC
CCGACAAGGCTCGTCGTCTCGGCTACAAGGCCAAGCAGGGCTATGTTGTC
TACCGTATCCGTGTGAGACGCGGTGGTCGTAAGAGACCCGCTCCTAAGGG
TGCCACCTACGATGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAAG
AAGCAGTCCGACGTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL15ATCC10864_004639Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004639-T1ATCC10864_004639-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004639-T1.cdsATCC10864_004639-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004639-T1.exon4ATCC10864_004639-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004639-T1.exon3ATCC10864_004639-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004639-T1.exon2ATCC10864_004639-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004639-T1.exon1ATCC10864_004639-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000439
InterProIPR020925
InterProIPR024794
InterProIPR012678
PFAMPF00827
Properties
Property NameValue
NoteBUSCO:EOG09264L0C
Product60S ribosomal protein L15
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000084supercontigMCQH01000084:50843..51814 -
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