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ATCC10864_005022-T1, ATCC10864_005022-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005022-T1
Unique NameATCC10864_005022-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000138:119381..120511-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005022-T1 ID=ATCC10864_005022-T1|Name=ATCC10864_005022-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1131bp|location=Sequence derived from alignment at MCQH01000138:119381..120511- (Aspergillus niger ATCC 10864)
ATGGCCTTCAACCGTATTGCTGTCTATGGTCACCGTGGATTCGTGGCCTC
TCGAGTTGTTCCTGTTCTAATTGCCTCGGGAGCTCCAATTACTGTTTTGC
ATCGCTCTACCTCGGATACCTCCAATCTCCCCGAACATGTCAGAAAGATT
GAAGTTGACGTTTTTGATGAAGACGCTTTGGTTAGAGCCTTGCAAGATAT
AGACATTGTGCTGTCAGTCAGAGTTACTGCGCATCTGCACCTTTTCGATT
GTATGCTGATGGATTTTTCAGTTCTCTGGTTGGAGATGAGGGTACCGACA
GACAGTATGGTTTTGTGAAGGCCATTCCTAGGACTAATGTCCGGCTTTTC
GTCCCTTCGGATTTCTGTCTGCGATATTGCGAGCAGGGAATGCGCATGCC
CTGTGTGGTGGCAAAAGCGAAACTCGAAAAGGCTTCTAAGGATGCTGGGA
TCCCAACCACCGTTGTTCACGCAGGAAATTTCGCTGAATTCACCTTAAGT
ACACCGTGAGTCATCAACCGTGTACTCGGGATGCTTATATCCATAACTGA
CACCTTCAAAAATTATAGGGCAGTGGGTGTTGATTTGCAGAATAATATAT
TGGTCTACACCGGCAACTCTGCTAGCGAAAAAGTCACTATGTGGTGGGTA
GCATTTCACCCAGAGACTCCTTCTTCATCTCAATAATCACTTTGGTCTGA
TTACACTAACTCCTTGTTATAGCACCAAGGACTACGTAGCGGCTGCGTAC
GTCGACATATTTACCACCAGACCTATACACACTATACAGAACCGGACCAT
CACCTTGTCAGAGCTTGCACCAACAGGCATGGAAATTGCTGCGATCATGA
AAAAGAAGAATGGCAGCGACCCCTCTATTGCGACACGAAGCATAGAGGAA
GTCGATCGAATGATTGAGGATTGTATCAGCAAGGAGAGTAATCTCGCCGT
CCCGTCCTATTGCCGCAAAATCTGGGGAACGGGACAAATGATGAAGATGC
TTCCCGATGATTTATGGGAAGTTAAGGACTACAGGAAAGCAACTTTAGAG
GACCTCGTCCTCGGAGGAAAATTGGAAAGCTATAGAGCTCTACCCGATCA
TGTGTGGGAGTATCTTAGAAAGATGCTTTGA
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Coding sequence (CDS) from alignment at MCQH01000138:119381..120511-

>ATCC10864_005022-T1 ID=ATCC10864_005022-T1|Name=ATCC10864_005022-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3720bp|location=Sequence derived from alignment at MCQH01000138:119381..120511- (Aspergillus niger ATCC 10864)
CACCAAGGACTACGTAGCGGCTGCGTACGTCGACATATTTACCACCAGAC
CTATACACACTATACAGAACCGGACCATCACCTTGTCAGAGCTTGCACCA
ACAGGCATGGAAATTGCTGCGATCATGAAAAAGAAGAATGGCAGCGACCC
CTCTATTGCGACACGAAGCATAGAGGAAGTCGATCGAATGATTGAGGATT
GTATCAGCAAGGAGAGTAATCTCGCCGTCCCGTCCTATTGCCGCAAAATC
TGGGGAACGGGACAAATGATGAAGATGCTTCCCGATGATTTATGGGAAGT
TAAGGACTACAGGAAAGCAACTTTAGAGGACCTCGTCCTCGGAGGAAAAT
TGGAAAGCTATAGAGCTCTACCCGATCATGTGTGGGAGTATCTTAGAAAG
ATGCTTTGAGGCAGTGGGTGTTGATTTGCAGAATAATATATTGGTCTACA
CCGGCAACTCTGCTAGCGAAAAAGTCACTATGTGTTCTCTGGTTGGAGAT
GAGGGTACCGACAGACAGTATGGTTTTGTGAAGGCCATTCCTAGGACTAA
TGTCCGGCTTTTCGTCCCTTCGGATTTCTGTCTGCGATATTGCGAGCAGG
GAATGCGCATGCCCTGTGTGGTGGCAAAAGCGAAACTCGAAAAGGCTTCT
AAGGATGCTGGGATCCCAACCACCGTTGTTCACGCAGGAAATTTCGCTGA
ATTCACCTTAAGTACACCATGGCCTTCAACCGTATTGCTGTCTATGGTCA
CCGTGGATTCGTGGCCTCTCGAGTTGTTCCTGTTCTAATTGCCTCGGGAG
CTCCAATTACTGTTTTGCATCGCTCTACCTCGGATACCTCCAATCTCCCC
GAACATGTCAGAAAGATTGAAGTTGACGTTTTTGATGAAGACGCTTTGGT
TAGAGCCTTGCAAGATATAGACATTGTGCTCACCAAGGACTACGTAGCGG
CTGCGTACGTCGACATATTTACCACCAGACCTATACACACTATACAGAAC
CGGACCATCACCTTGTCAGAGCTTGCACCAACAGGCATGGAAATTGCTGC
GATCATGAAAAAGAAGAATGGCAGCGACCCCTCTATTGCGACACGAAGCA
TAGAGGAAGTCGATCGAATGATTGAGGATTGTATCAGCAAGGAGAGTAAT
CTCGCCGTCCCGTCCTATTGCCGCAAAATCTGGGGAACGGGACAAATGAT
GAAGATGCTTCCCGATGATTTATGGGAAGTTAAGGACTACAGGAAAGCAA
CTTTAGAGGACCTCGTCCTCGGAGGAAAATTGGAAAGCTATAGAGCTCTA
CCCGATCATGTGTGGGAGTATCTTAGAAAGATGCTTTGAGGCAGTGGGTG
TTGATTTGCAGAATAATATATTGGTCTACACCGGCAACTCTGCTAGCGAA
AAAGTCACTATGTGTTCTCTGGTTGGAGATGAGGGTACCGACAGACAGTA
TGGTTTTGTGAAGGCCATTCCTAGGACTAATGTCCGGCTTTTCGTCCCTT
CGGATTTCTGTCTGCGATATTGCGAGCAGGGAATGCGCATGCCCTGTGTG
GTGGCAAAAGCGAAACTCGAAAAGGCTTCTAAGGATGCTGGGATCCCAAC
CACCGTTGTTCACGCAGGAAATTTCGCTGAATTCACCTTAAGTACACCAT
GGCCTTCAACCGTATTGCTGTCTATGGTCACCGTGGATTCGTGGCCTCTC
GAGTTGTTCCTGTTCTAATTGCCTCGGGAGCTCCAATTACTGTTTTGCAT
CGCTCTACCTCGGATACCTCCAATCTCCCCGAACATGTCAGAAAGATTGA
AGTTGACGTTTTTGATGAAGACGCTTTGGTTAGAGCCTTGCAAGATATAG
ACATTGTGCTCACCAAGGACTACGTAGCGGCTGCGTACGTCGACATATTT
ACCACCAGACCTATACACACTATACAGAACCGGACCATCACCTTGTCAGA
GCTTGCACCAACAGGCATGGAAATTGCTGCGATCATGAAAAAGAAGAATG
GCAGCGACCCCTCTATTGCGACACGAAGCATAGAGGAAGTCGATCGAATG
ATTGAGGATTGTATCAGCAAGGAGAGTAATCTCGCCGTCCCGTCCTATTG
CCGCAAAATCTGGGGAACGGGACAAATGATGAAGATGCTTCCCGATGATT
TATGGGAAGTTAAGGACTACAGGAAAGCAACTTTAGAGGACCTCGTCCTC
GGAGGAAAATTGGAAAGCTATAGAGCTCTACCCGATCATGTGTGGGAGTA
TCTTAGAAAGATGCTTTGAGGCAGTGGGTGTTGATTTGCAGAATAATATA
TTGGTCTACACCGGCAACTCTGCTAGCGAAAAAGTCACTATGTGTTCTCT
GGTTGGAGATGAGGGTACCGACAGACAGTATGGTTTTGTGAAGGCCATTC
CTAGGACTAATGTCCGGCTTTTCGTCCCTTCGGATTTCTGTCTGCGATAT
TGCGAGCAGGGAATGCGCATGCCCTGTGTGGTGGCAAAAGCGAAACTCGA
AAAGGCTTCTAAGGATGCTGGGATCCCAACCACCGTTGTTCACGCAGGAA
ATTTCGCTGAATTCACCTTAAGTACACCATGGCCTTCAACCGTATTGCTG
TCTATGGTCACCGTGGATTCGTGGCCTCTCGAGTTGTTCCTGTTCTAATT
GCCTCGGGAGCTCCAATTACTGTTTTGCATCGCTCTACCTCGGATACCTC
CAATCTCCCCGAACATGTCAGAAAGATTGAAGTTGACGTTTTTGATGAAG
ACGCTTTGGTTAGAGCCTTGCAAGATATAGACATTGTGCTCACCAAGGAC
TACGTAGCGGCTGCGTACGTCGACATATTTACCACCAGACCTATACACAC
TATACAGAACCGGACCATCACCTTGTCAGAGCTTGCACCAACAGGCATGG
AAATTGCTGCGATCATGAAAAAGAAGAATGGCAGCGACCCCTCTATTGCG
ACACGAAGCATAGAGGAAGTCGATCGAATGATTGAGGATTGTATCAGCAA
GGAGAGTAATCTCGCCGTCCCGTCCTATTGCCGCAAAATCTGGGGAACGG
GACAAATGATGAAGATGCTTCCCGATGATTTATGGGAAGTTAAGGACTAC
AGGAAAGCAACTTTAGAGGACCTCGTCCTCGGAGGAAAATTGGAAAGCTA
TAGAGCTCTACCCGATCATGTGTGGGAGTATCTTAGAAAGATGCTTTGAG
GCAGTGGGTGTTGATTTGCAGAATAATATATTGGTCTACACCGGCAACTC
TGCTAGCGAAAAAGTCACTATGTGTTCTCTGGTTGGAGATGAGGGTACCG
ACAGACAGTATGGTTTTGTGAAGGCCATTCCTAGGACTAATGTCCGGCTT
TTCGTCCCTTCGGATTTCTGTCTGCGATATTGCGAGCAGGGAATGCGCAT
GCCCTGTGTGGTGGCAAAAGCGAAACTCGAAAAGGCTTCTAAGGATGCTG
GGATCCCAACCACCGTTGTTCACGCAGGAAATTTCGCTGAATTCACCTTA
AGTACACCATGGCCTTCAACCGTATTGCTGTCTATGGTCACCGTGGATTC
GTGGCCTCTCGAGTTGTTCCTGTTCTAATTGCCTCGGGAGCTCCAATTAC
TGTTTTGCATCGCTCTACCTCGGATACCTCCAATCTCCCCGAACATGTCA
GAAAGATTGAAGTTGACGTTTTTGATGAAGACGCTTTGGTTAGAGCCTTG
CAAGATATAGACATTGTGCT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005022ATCC10864_005022Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005022-T1ATCC10864_005022-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005022-T1.cdsATCC10864_005022-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005022-T1.exon4ATCC10864_005022-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005022-T1.exon3ATCC10864_005022-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005022-T1.exon2ATCC10864_005022-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005022-T1.exon1ATCC10864_005022-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR008030
InterProIPR036291
PFAMPF05368
PFAMPF13460
Properties
Property NameValue
NoteSMCOG1199:NmrA family protein
NoteantiSMASH:Cluster_1000138.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000138supercontigMCQH01000138:119381..120511 -
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