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ATCC10864_005522-T1, ATCC10864_005522-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005522-T1
Unique NameATCC10864_005522-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000153:182576..183969-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005522-T1 ID=ATCC10864_005522-T1|Name=ATCC10864_005522-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1394bp|location=Sequence derived from alignment at MCQH01000153:182576..183969- (Aspergillus niger ATCC 10864)
ATGGGTTCTACCGGACAATTTCCCCGCATCAAAGAGATCCGCACCTTCAT
CATTGATGGTGTGGGATCCGGAGGTGATTATCATAATGTATGCTCAGCAG
CGCCCGGATAATGATGAGCAGATCGCTAAATTTCTCCATTTCAACAGGTC
AAAGGAGGTCACTGGTTGATTGACAGTAACATCTCCACCCCCATGACTCG
CTGGGCACAATACCGTGGCTCTCGCACATCATGGGGTATTAACGTCCTGG
GCTCTTTCTGCGTCGAGATTGAAGCTACCGACGGGACTAAGGGATTTGCC
ACGGGATTCGGTGGTCCCCCAGCTTGTTGGCTGGTCCATCAACACTTTGA
GCGCTTCCTGCTTGGTGCTGGTATGAGCTATCAATATATCAGTCTACTGA
GAATGAGCCAGGCTAATTTGTATCTCATCTTCTAGACCCCAGAGATACCA
ATGACCTGTTCGAGAAGATGTACCGGGGATCGATGTTCTATGGCAGAAAA
GGTCTCCCTGTTGCCGTCATCTCAGTGATTGATTTGGCTATCTGGGACCT
TCTGGGCAAGATTCGCAACGAACCCGTTTACAAGCTCATTGGCGGCGCTA
CCCGTTCGCGTCTGGACTTCTACTGCACTGGACCCCAGCCCGCTTCGGCC
AAGGCCATGGGTTTCTCCGGAGCCAAGGTCGCTCTTCCCCATGGCCCTGA
CGAGGGTACGGAAGGACTCTTGAAGAACGTCGACTACCTCCGCAAGCAGC
GGGAATCAGTCGGTCCCAACTTCCCTCTGCGGGTCGACTGCTACATGTCC
CTGAACGTTCCATACACAATTGAGCTGGTCAAGCGTTGTGAGGCGGAAGG
AATCAACATTGACTGGTGGGAAGAATGCTTGACCCCGGATGACTTCGACG
GTCATGCGCTTTTGAAGAGAGCCCACCCCACTGTCAAGTTCACCACCGGA
GAGCACGAGTACTCACGGTACGGTTTCCGAAAGCTCGTGGAGGGCCGTAA
CTTGGACATTCTGCAGCCGGATGTCATGTGGGTCGGTGGTATGACGGAGT
TGCTCAAGGTCTCCGCCCTTGCCAGTGCCTACGACCTCCCCGTTGTTCCT
CACGCATCTGGACCTTACTCCTACCACTTTGTGGTTTCGCAACCCAATAC
ACCCTTCCAGGAATACCTCGCCAACTCTGCAGATGGACACACTGTTGAGC
CCGTCTTCGGAAACCTCTTCCTCAACGAGCCGATCCCTACTAAGGGATAC
CTGGATGTATCGATCCTGGACAAGCCGGGCTTCGGCCTCGAGCTAAACCC
TGCTGCGTCTCTTATCCCAGCAGCTTCAATTCTCACTCCTGCACCCCAAA
AGGCACTGGTTGCTCCAACTGAGAACCAGCAGGAGTCTACTTGA
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Coding sequence (CDS) from alignment at MCQH01000153:182576..183969-

>ATCC10864_005522-T1 ID=ATCC10864_005522-T1|Name=ATCC10864_005522-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3807bp|location=Sequence derived from alignment at MCQH01000153:182576..183969- (Aspergillus niger ATCC 10864)
ACCCCAGAGATACCAATGACCTGTTCGAGAAGATGTACCGGGGATCGATG
TTCTATGGCAGAAAAGGTCTCCCTGTTGCCGTCATCTCAGTGATTGATTT
GGCTATCTGGGACCTTCTGGGCAAGATTCGCAACGAACCCGTTTACAAGC
TCATTGGCGGCGCTACCCGTTCGCGTCTGGACTTCTACTGCACTGGACCC
CAGCCCGCTTCGGCCAAGGCCATGGGTTTCTCCGGAGCCAAGGTCGCTCT
TCCCCATGGCCCTGACGAGGGTACGGAAGGACTCTTGAAGAACGTCGACT
ACCTCCGCAAGCAGCGGGAATCAGTCGGTCCCAACTTCCCTCTGCGGGTC
GACTGCTACATGTCCCTGAACGTTCCATACACAATTGAGCTGGTCAAGCG
TTGTGAGGCGGAAGGAATCAACATTGACTGGTGGGAAGAATGCTTGACCC
CGGATGACTTCGACGGTCATGCGCTTTTGAAGAGAGCCCACCCCACTGTC
AAGTTCACCACCGGAGAGCACGAGTACTCACGGTACGGTTTCCGAAAGCT
CGTGGAGGGCCGTAACTTGGACATTCTGCAGCCGGATGTCATGTGGGTCG
GTGGTATGACGGAGTTGCTCAAGGTCTCCGCCCTTGCCAGTGCCTACGAC
CTCCCCGTTGTTCCTCACGCATCTGGACCTTACTCCTACCACTTTGTGGT
TTCGCAACCCAATACACCCTTCCAGGAATACCTCGCCAACTCTGCAGATG
GACACACTGTTGAGCCCGTCTTCGGAAACCTCTTCCTCAACGAGCCGATC
CCTACTAAGGGATACCTGGATGTATCGATCCTGGACAAGCCGGGCTTCGG
CCTCGAGCTAAACCCTGCTGCGTCTCTTATCCCAGCAGCTTCAATTCTCA
CTCCTGCACCCCAAAAGGCACTGGTTGCTCCAACTGAGAACCAGCAGGAG
TCTACTTGAGTCAAAGGAGGTCACTGGTTGATTGACAGTAACATCTCCAC
CCCCATGACTCGCTGGGCACAATACCGTGGCTCTCGCACATCATGGGGTA
TTAACGTCCTGGGCTCTTTCTGCGTCGAGATTGAAGCTACCGACGGGACT
AAGGGATTTGCCACGGGATTCGGTGGTCCCCCAGCTTGTTGGCTGGTCCA
TCAACACTTTGAGCGCTTCCTGCTTGGTGCTGATGGGTTCTACCGGACAA
TTTCCCCGCATCAAAGAGATCCGCACCTTCATCATTGATGGTGTGGGATC
CGGAGGTGATTATCATAATACCCCAGAGATACCAATGACCTGTTCGAGAA
GATGTACCGGGGATCGATGTTCTATGGCAGAAAAGGTCTCCCTGTTGCCG
TCATCTCAGTGATTGATTTGGCTATCTGGGACCTTCTGGGCAAGATTCGC
AACGAACCCGTTTACAAGCTCATTGGCGGCGCTACCCGTTCGCGTCTGGA
CTTCTACTGCACTGGACCCCAGCCCGCTTCGGCCAAGGCCATGGGTTTCT
CCGGAGCCAAGGTCGCTCTTCCCCATGGCCCTGACGAGGGTACGGAAGGA
CTCTTGAAGAACGTCGACTACCTCCGCAAGCAGCGGGAATCAGTCGGTCC
CAACTTCCCTCTGCGGGTCGACTGCTACATGTCCCTGAACGTTCCATACA
CAATTGAGCTGGTCAAGCGTTGTGAGGCGGAAGGAATCAACATTGACTGG
TGGGAAGAATGCTTGACCCCGGATGACTTCGACGGTCATGCGCTTTTGAA
GAGAGCCCACCCCACTGTCAAGTTCACCACCGGAGAGCACGAGTACTCAC
GGTACGGTTTCCGAAAGCTCGTGGAGGGCCGTAACTTGGACATTCTGCAG
CCGGATGTCATGTGGGTCGGTGGTATGACGGAGTTGCTCAAGGTCTCCGC
CCTTGCCAGTGCCTACGACCTCCCCGTTGTTCCTCACGCATCTGGACCTT
ACTCCTACCACTTTGTGGTTTCGCAACCCAATACACCCTTCCAGGAATAC
CTCGCCAACTCTGCAGATGGACACACTGTTGAGCCCGTCTTCGGAAACCT
CTTCCTCAACGAGCCGATCCCTACTAAGGGATACCTGGATGTATCGATCC
TGGACAAGCCGGGCTTCGGCCTCGAGCTAAACCCTGCTGCGTCTCTTATC
CCAGCAGCTTCAATTCTCACTCCTGCACCCCAAAAGGCACTGGTTGCTCC
AACTGAGAACCAGCAGGAGTCTACTTGAGTCAAAGGAGGTCACTGGTTGA
TTGACAGTAACATCTCCACCCCCATGACTCGCTGGGCACAATACCGTGGC
TCTCGCACATCATGGGGTATTAACGTCCTGGGCTCTTTCTGCGTCGAGAT
TGAAGCTACCGACGGGACTAAGGGATTTGCCACGGGATTCGGTGGTCCCC
CAGCTTGTTGGCTGGTCCATCAACACTTTGAGCGCTTCCTGCTTGGTGCT
GATGGGTTCTACCGGACAATTTCCCCGCATCAAAGAGATCCGCACCTTCA
TCATTGATGGTGTGGGATCCGGAGGTGATTATCATAATACCCCAGAGATA
CCAATGACCTGTTCGAGAAGATGTACCGGGGATCGATGTTCTATGGCAGA
AAAGGTCTCCCTGTTGCCGTCATCTCAGTGATTGATTTGGCTATCTGGGA
CCTTCTGGGCAAGATTCGCAACGAACCCGTTTACAAGCTCATTGGCGGCG
CTACCCGTTCGCGTCTGGACTTCTACTGCACTGGACCCCAGCCCGCTTCG
GCCAAGGCCATGGGTTTCTCCGGAGCCAAGGTCGCTCTTCCCCATGGCCC
TGACGAGGGTACGGAAGGACTCTTGAAGAACGTCGACTACCTCCGCAAGC
AGCGGGAATCAGTCGGTCCCAACTTCCCTCTGCGGGTCGACTGCTACATG
TCCCTGAACGTTCCATACACAATTGAGCTGGTCAAGCGTTGTGAGGCGGA
AGGAATCAACATTGACTGGTGGGAAGAATGCTTGACCCCGGATGACTTCG
ACGGTCATGCGCTTTTGAAGAGAGCCCACCCCACTGTCAAGTTCACCACC
GGAGAGCACGAGTACTCACGGTACGGTTTCCGAAAGCTCGTGGAGGGCCG
TAACTTGGACATTCTGCAGCCGGATGTCATGTGGGTCGGTGGTATGACGG
AGTTGCTCAAGGTCTCCGCCCTTGCCAGTGCCTACGACCTCCCCGTTGTT
CCTCACGCATCTGGACCTTACTCCTACCACTTTGTGGTTTCGCAACCCAA
TACACCCTTCCAGGAATACCTCGCCAACTCTGCAGATGGACACACTGTTG
AGCCCGTCTTCGGAAACCTCTTCCTCAACGAGCCGATCCCTACTAAGGGA
TACCTGGATGTATCGATCCTGGACAAGCCGGGCTTCGGCCTCGAGCTAAA
CCCTGCTGCGTCTCTTATCCCAGCAGCTTCAATTCTCACTCCTGCACCCC
AAAAGGCACTGGTTGCTCCAACTGAGAACCAGCAGGAGTCTACTTGAGTC
AAAGGAGGTCACTGGTTGATTGACAGTAACATCTCCACCCCCATGACTCG
CTGGGCACAATACCGTGGCTCTCGCACATCATGGGGTATTAACGTCCTGG
GCTCTTTCTGCGTCGAGATTGAAGCTACCGACGGGACTAAGGGATTTGCC
ACGGGATTCGGTGGTCCCCCAGCTTGTTGGCTGGTCCATCAACACTTTGA
GCGCTTCCTGCTTGGTGCTGATGGGTTCTACCGGACAATTTCCCCGCATC
AAAGAGATCCGCACCTTCATCATTGATGGTGTGGGATCCGGAGGTGATTA
TCATAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050032L-rhamnonate dehydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005522ATCC10864_005522Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005522-T1ATCC10864_005522-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005522-T1.cdsATCC10864_005522-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005522-T1.exon3ATCC10864_005522-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005522-T1.exon2ATCC10864_005522-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005522-T1.exon1ATCC10864_005522-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR029017
InterProIPR023444
InterProIPR013341
InterProIPR036849
PFAMPF13378
InterProIPR013342
InterProIPR029065
PFAMPF02746
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000153supercontigMCQH01000153:182576..183969 -
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