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ATCC10864_006622-T1, ATCC10864_006622-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006622-T1
Unique NameATCC10864_006622-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000169:197102..198427-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006622-T1 ID=ATCC10864_006622-T1|Name=ATCC10864_006622-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1326bp|location=Sequence derived from alignment at MCQH01000169:197102..198427- (Aspergillus niger ATCC 10864)
ATGGTTAAGTCAATTCTTGCATCCGTTTTCTTTGCGGCGACTGCGCTGGC
CGCGAGCCGCATGACGGCTCCTTCCGGTGCGATTGTCGTTGCCAAGTCCG
GAGGTGACTACGACACGGTGAGCATCTAGACTGTCGATCGTGTTGCAGAT
GTGTGGCTGATAGTGTCTTGTTGAACAGATCAGCGCTGCCGTTGATGCTC
TGAGCACCACTTCGACCGAGACCCAGACTATCTTCATTGAGGAGGGATCC
TACGACGAGCAGGTGTACATTCCCGCTCTCAGTGGAAAGCTGATCGTCTA
CGGTCAGACTGAGGAGTACGTTGTCAGTTGCGTATAGAAATTCAAGGATA
CTAATGAAGGTTTAGCACCACCACCTACACCAGCAACCTGGTCAACATCA
CCCACGCCATTGCCTTAGCCGATGTCGACAATGACGATGAGACTGGTCGG
TCCACACACTCTGGAAAATGTCCGTGAACTCGCTAACAATAAGTAGCAAC
CCTCCGTAACTACGCCGAGGGCTCGGCCATCTACAACCTAAACATTGCCA
ACACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCCGTGAGTGCCTATGCC
ACCGAGCAGGGATACTACGCCTGCCAGTTCACCGGATACCAGGGTAGGAC
CAATTTCAGATATGCCAACCGACAGTGATTAATCTCTACTATAGACACCC
TTCTGGCTGAGACCGGTTACCAGGTTTACGCCGGAACCTACATCGAGGGT
GCCGTGTATGTCCCTACCTTAATACCTTCGAAAGAAGTGAATCCAACTAA
CGTACAACCAGTGACTTTATTTTCGGACAGCACGCCCGCGCTTGGTTCCA
CGAGTGCGACATCCGCGTTCTCGAGGGCCCCAGCTCCGCCTCCATCACCG
CCAACGGCCGCTCCTCCGAGTCCGACGACTCCTACTACGTGATCCACAAG
TCCACCGTCGCTGCTGCTGATGGCAACGATGTTTCCTCGGGCACCTACTA
TCTTGGTATGCCACTGGTCTAGAACTGTCCACGGAGCCACTAGCCCACTA
ACGAATATTATCACAGGCCGCCCCTGGTCCCAGTACGCTCGCGTCTGCTT
CCAGAAGACCTCCATGACCGATGTGATCAACCACCTCGGCTGGACTGAGT
GGTCGACCTCCACCCCCAACACTGAGAATGTCACCTTTGTTGAATACGGC
AACACCGGTGCTGGTTCTAAGGGCCCCCGTGCTAACTTCTCTTCTGAGCT
CACCGAGCCCATCTCTATCTCTACCCTTCTGGGCTCTGACTGGGAGGACT
GGGTTGATACCAGCTACATCAACTAA
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Coding sequence (CDS) from alignment at MCQH01000169:197102..198427-

>ATCC10864_006622-T1 ID=ATCC10864_006622-T1|Name=ATCC10864_006622-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6972bp|location=Sequence derived from alignment at MCQH01000169:197102..198427- (Aspergillus niger ATCC 10864)
GCCGCCCCTGGTCCCAGTACGCTCGCGTCTGCTTCCAGAAGACCTCCATG
ACCGATGTGATCAACCACCTCGGCTGGACTGAGTGGTCGACCTCCACCCC
CAACACTGAGAATGTCACCTTTGTTGAATACGGCAACACCGGTGCTGGTT
CTAAGGGCCCCCGTGCTAACTTCTCTTCTGAGCTCACCGAGCCCATCTCT
ATCTCTACCCTTCTGGGCTCTGACTGGGAGGACTGGGTTGATACCAGCTA
CATCAACTAATGACTTTATTTTCGGACAGCACGCCCGCGCTTGGTTCCAC
GAGTGCGACATCCGCGTTCTCGAGGGCCCCAGCTCCGCCTCCATCACCGC
CAACGGCCGCTCCTCCGAGTCCGACGACTCCTACTACGTGATCCACAAGT
CCACCGTCGCTGCTGCTGATGGCAACGATGTTTCCTCGGGCACCTACTAT
CTTGACACCCTTCTGGCTGAGACCGGTTACCAGGTTTACGCCGGAACCTA
CATCGAGGGTGCCGTCAACCCTCCGTAACTACGCCGAGGGCTCGGCCATC
TACAACCTAAACATTGCCAACACCTGCGGTCAGGCCTGCCACCAGGCTCT
CGCCGTGAGTGCCTATGCCACCGAGCAGGGATACTACGCCTGCCAGTTCA
CCGGATACCAGGCACCACCACCTACACCAGCAACCTGGTCAACATCACCC
ACGCCATTGCCTTAGCCGATGTCGACAATGACGATGAGACTGATCAGCGC
TGCCGTTGATGCTCTGAGCACCACTTCGACCGAGACCCAGACTATCTTCA
TTGAGGAGGGATCCTACGACGAGCAGGTGTACATTCCCGCTCTCAGTGGA
AAGCTGATCGTCTACGGTCAGACTGAGGAATGGTTAAGTCAATTCTTGCA
TCCGTTTTCTTTGCGGCGACTGCGCTGGCCGCGAGCCGCATGACGGCTCC
TTCCGGTGCGATTGTCGTTGCCAAGTCCGGAGGTGACTACGACACGGCCG
CCCCTGGTCCCAGTACGCTCGCGTCTGCTTCCAGAAGACCTCCATGACCG
ATGTGATCAACCACCTCGGCTGGACTGAGTGGTCGACCTCCACCCCCAAC
ACTGAGAATGTCACCTTTGTTGAATACGGCAACACCGGTGCTGGTTCTAA
GGGCCCCCGTGCTAACTTCTCTTCTGAGCTCACCGAGCCCATCTCTATCT
CTACCCTTCTGGGCTCTGACTGGGAGGACTGGGTTGATACCAGCTACATC
AACTAATGACTTTATTTTCGGACAGCACGCCCGCGCTTGGTTCCACGAGT
GCGACATCCGCGTTCTCGAGGGCCCCAGCTCCGCCTCCATCACCGCCAAC
GGCCGCTCCTCCGAGTCCGACGACTCCTACTACGTGATCCACAAGTCCAC
CGTCGCTGCTGCTGATGGCAACGATGTTTCCTCGGGCACCTACTATCTTG
ACACCCTTCTGGCTGAGACCGGTTACCAGGTTTACGCCGGAACCTACATC
GAGGGTGCCGTCAACCCTCCGTAACTACGCCGAGGGCTCGGCCATCTACA
ACCTAAACATTGCCAACACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCC
GTGAGTGCCTATGCCACCGAGCAGGGATACTACGCCTGCCAGTTCACCGG
ATACCAGGCACCACCACCTACACCAGCAACCTGGTCAACATCACCCACGC
CATTGCCTTAGCCGATGTCGACAATGACGATGAGACTGATCAGCGCTGCC
GTTGATGCTCTGAGCACCACTTCGACCGAGACCCAGACTATCTTCATTGA
GGAGGGATCCTACGACGAGCAGGTGTACATTCCCGCTCTCAGTGGAAAGC
TGATCGTCTACGGTCAGACTGAGGAATGGTTAAGTCAATTCTTGCATCCG
TTTTCTTTGCGGCGACTGCGCTGGCCGCGAGCCGCATGACGGCTCCTTCC
GGTGCGATTGTCGTTGCCAAGTCCGGAGGTGACTACGACACGGCCGCCCC
TGGTCCCAGTACGCTCGCGTCTGCTTCCAGAAGACCTCCATGACCGATGT
GATCAACCACCTCGGCTGGACTGAGTGGTCGACCTCCACCCCCAACACTG
AGAATGTCACCTTTGTTGAATACGGCAACACCGGTGCTGGTTCTAAGGGC
CCCCGTGCTAACTTCTCTTCTGAGCTCACCGAGCCCATCTCTATCTCTAC
CCTTCTGGGCTCTGACTGGGAGGACTGGGTTGATACCAGCTACATCAACT
AATGACTTTATTTTCGGACAGCACGCCCGCGCTTGGTTCCACGAGTGCGA
CATCCGCGTTCTCGAGGGCCCCAGCTCCGCCTCCATCACCGCCAACGGCC
GCTCCTCCGAGTCCGACGACTCCTACTACGTGATCCACAAGTCCACCGTC
GCTGCTGCTGATGGCAACGATGTTTCCTCGGGCACCTACTATCTTGACAC
CCTTCTGGCTGAGACCGGTTACCAGGTTTACGCCGGAACCTACATCGAGG
GTGCCGTCAACCCTCCGTAACTACGCCGAGGGCTCGGCCATCTACAACCT
AAACATTGCCAACACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCCGTGA
GTGCCTATGCCACCGAGCAGGGATACTACGCCTGCCAGTTCACCGGATAC
CAGGCACCACCACCTACACCAGCAACCTGGTCAACATCACCCACGCCATT
GCCTTAGCCGATGTCGACAATGACGATGAGACTGATCAGCGCTGCCGTTG
ATGCTCTGAGCACCACTTCGACCGAGACCCAGACTATCTTCATTGAGGAG
GGATCCTACGACGAGCAGGTGTACATTCCCGCTCTCAGTGGAAAGCTGAT
CGTCTACGGTCAGACTGAGGAATGGTTAAGTCAATTCTTGCATCCGTTTT
CTTTGCGGCGACTGCGCTGGCCGCGAGCCGCATGACGGCTCCTTCCGGTG
CGATTGTCGTTGCCAAGTCCGGAGGTGACTACGACACGGCCGCCCCTGGT
CCCAGTACGCTCGCGTCTGCTTCCAGAAGACCTCCATGACCGATGTGATC
AACCACCTCGGCTGGACTGAGTGGTCGACCTCCACCCCCAACACTGAGAA
TGTCACCTTTGTTGAATACGGCAACACCGGTGCTGGTTCTAAGGGCCCCC
GTGCTAACTTCTCTTCTGAGCTCACCGAGCCCATCTCTATCTCTACCCTT
CTGGGCTCTGACTGGGAGGACTGGGTTGATACCAGCTACATCAACTAATG
ACTTTATTTTCGGACAGCACGCCCGCGCTTGGTTCCACGAGTGCGACATC
CGCGTTCTCGAGGGCCCCAGCTCCGCCTCCATCACCGCCAACGGCCGCTC
CTCCGAGTCCGACGACTCCTACTACGTGATCCACAAGTCCACCGTCGCTG
CTGCTGATGGCAACGATGTTTCCTCGGGCACCTACTATCTTGACACCCTT
CTGGCTGAGACCGGTTACCAGGTTTACGCCGGAACCTACATCGAGGGTGC
CGTCAACCCTCCGTAACTACGCCGAGGGCTCGGCCATCTACAACCTAAAC
ATTGCCAACACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCCGTGAGTGC
CTATGCCACCGAGCAGGGATACTACGCCTGCCAGTTCACCGGATACCAGG
CACCACCACCTACACCAGCAACCTGGTCAACATCACCCACGCCATTGCCT
TAGCCGATGTCGACAATGACGATGAGACTGATCAGCGCTGCCGTTGATGC
TCTGAGCACCACTTCGACCGAGACCCAGACTATCTTCATTGAGGAGGGAT
CCTACGACGAGCAGGTGTACATTCCCGCTCTCAGTGGAAAGCTGATCGTC
TACGGTCAGACTGAGGAATGGTTAAGTCAATTCTTGCATCCGTTTTCTTT
GCGGCGACTGCGCTGGCCGCGAGCCGCATGACGGCTCCTTCCGGTGCGAT
TGTCGTTGCCAAGTCCGGAGGTGACTACGACACGGCCGCCCCTGGTCCCA
GTACGCTCGCGTCTGCTTCCAGAAGACCTCCATGACCGATGTGATCAACC
ACCTCGGCTGGACTGAGTGGTCGACCTCCACCCCCAACACTGAGAATGTC
ACCTTTGTTGAATACGGCAACACCGGTGCTGGTTCTAAGGGCCCCCGTGC
TAACTTCTCTTCTGAGCTCACCGAGCCCATCTCTATCTCTACCCTTCTGG
GCTCTGACTGGGAGGACTGGGTTGATACCAGCTACATCAACTAATGACTT
TATTTTCGGACAGCACGCCCGCGCTTGGTTCCACGAGTGCGACATCCGCG
TTCTCGAGGGCCCCAGCTCCGCCTCCATCACCGCCAACGGCCGCTCCTCC
GAGTCCGACGACTCCTACTACGTGATCCACAAGTCCACCGTCGCTGCTGC
TGATGGCAACGATGTTTCCTCGGGCACCTACTATCTTGACACCCTTCTGG
CTGAGACCGGTTACCAGGTTTACGCCGGAACCTACATCGAGGGTGCCGTC
AACCCTCCGTAACTACGCCGAGGGCTCGGCCATCTACAACCTAAACATTG
CCAACACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCCGTGAGTGCCTAT
GCCACCGAGCAGGGATACTACGCCTGCCAGTTCACCGGATACCAGGCACC
ACCACCTACACCAGCAACCTGGTCAACATCACCCACGCCATTGCCTTAGC
CGATGTCGACAATGACGATGAGACTGATCAGCGCTGCCGTTGATGCTCTG
AGCACCACTTCGACCGAGACCCAGACTATCTTCATTGAGGAGGGATCCTA
CGACGAGCAGGTGTACATTCCCGCTCTCAGTGGAAAGCTGATCGTCTACG
GTCAGACTGAGGAATGGTTAAGTCAATTCTTGCATCCGTTTTCTTTGCGG
CGACTGCGCTGGCCGCGAGCCGCATGACGGCTCCTTCCGGTGCGATTGTC
GTTGCCAAGTCCGGAGGTGACTACGACACGGCCGCCCCTGGTCCCAGTAC
GCTCGCGTCTGCTTCCAGAAGACCTCCATGACCGATGTGATCAACCACCT
CGGCTGGACTGAGTGGTCGACCTCCACCCCCAACACTGAGAATGTCACCT
TTGTTGAATACGGCAACACCGGTGCTGGTTCTAAGGGCCCCCGTGCTAAC
TTCTCTTCTGAGCTCACCGAGCCCATCTCTATCTCTACCCTTCTGGGCTC
TGACTGGGAGGACTGGGTTGATACCAGCTACATCAACTAATGACTTTATT
TTCGGACAGCACGCCCGCGCTTGGTTCCACGAGTGCGACATCCGCGTTCT
CGAGGGCCCCAGCTCCGCCTCCATCACCGCCAACGGCCGCTCCTCCGAGT
CCGACGACTCCTACTACGTGATCCACAAGTCCACCGTCGCTGCTGCTGAT
GGCAACGATGTTTCCTCGGGCACCTACTATCTTGACACCCTTCTGGCTGA
GACCGGTTACCAGGTTTACGCCGGAACCTACATCGAGGGTGCCGTCAACC
CTCCGTAACTACGCCGAGGGCTCGGCCATCTACAACCTAAACATTGCCAA
CACCTGCGGTCAGGCCTGCCACCAGGCTCTCGCCGTGAGTGCCTATGCCA
CCGAGCAGGGATACTACGCCTGCCAGTTCACCGGATACCAGGCACCACCA
CCTACACCAGCAACCTGGTCAACATCACCCACGCCATTGCCTTAGCCGAT
GTCGACAATGACGATGAGACTGATCAGCGCTGCCGTTGATGCTCTGAGCA
CCACTTCGACCGAGACCCAGACTATCTTCATTGAGGAGGGATCCTACGAC
GAGCAGGTGTACATTCCCGCTCTCAGTGGAAAGCTGATCGTCTACGGTCA
GACTGAGGAATGGTTAAGTCAATTCTTGCATCCGTTTTCTTTGCGGCGAC
TGCGCTGGCCGCGAGCCGCATGACGGCTCCTTCCGGTGCGATTGTCGTTG
CCAAGTCCGGAGGTGACTACGACACGGCCGCCCCTGGTCCCAGTACGCTC
GCGTCTGCTTCCAGAAGACCTCCATGACCGATGTGATCAACCACCTCGGC
TGGACTGAGTGGTCGACCTCCACCCCCAACACTGAGAATGTCACCTTTGT
TGAATACGGCAACACCGGTGCTGGTTCTAAGGGCCCCCGTGCTAACTTCT
CTTCTGAGCTCACCGAGCCCATCTCTATCTCTACCCTTCTGGGCTCTGAC
TGGGAGGACTGGGTTGATACCAGCTACATCAACTAATGACTTTATTTTCG
GACAGCACGCCCGCGCTTGGTTCCACGAGTGCGACATCCGCGTTCTCGAG
GGCCCCAGCTCCGCCTCCATCACCGCCAACGGCCGCTCCTCCGAGTCCGA
CGACTCCTACTACGTGATCCACAAGTCCACCGTCGCTGCTGCTGATGGCA
ACGATGTTTCCTCGGGCACCTACTATCTTGACACCCTTCTGGCTGAGACC
GGTTACCAGGTTTACGCCGGAACCTACATCGAGGGTGCCGTCAACCCTCC
GTAACTACGCCGAGGGCTCGGCCATCTACAACCTAAACATTGCCAACACC
TGCGGTCAGGCCTGCCACCAGGCTCTCGCCGTGAGTGCCTATGCCACCGA
GCAGGGATACTACGCCTGCCAGTTCACCGGATACCAGGCACCACCACCTA
CACCAGCAACCTGGTCAACATCACCCACGCCATTGCCTTAGCCGATGTCG
ACAATGACGATGAGACTGATCAGCGCTGCCGTTGATGCTCTGAGCACCAC
TTCGACCGAGACCCAGACTATCTTCATTGAGGAGGGATCCTACGACGAGC
AGGTGTACATTCCCGCTCTCAGTGGAAAGCTGATCGTCTACGGTCAGACT
GAGGAATGGTTAAGTCAATTCTTGCATCCGTTTTCTTTGCGGCGACTGCG
CTGGCCGCGAGCCGCATGACGGCTCCTTCCGGTGCGATTGTCGTTGCCAA
GTCCGGAGGTGACTACGACACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030599pectinesterase activity
Vocabulary: Biological Process
TermDefinition
GO:0042545cell wall modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PME1ATCC10864_006622Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006622-T1ATCC10864_006622-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006622-T1.cdsATCC10864_006622-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006622-T1.exon7ATCC10864_006622-T1.exon7Aspergillus niger ATCC 10864exon
ATCC10864_006622-T1.exon6ATCC10864_006622-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_006622-T1.exon5ATCC10864_006622-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_006622-T1.exon4ATCC10864_006622-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_006622-T1.exon3ATCC10864_006622-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_006622-T1.exon2ATCC10864_006622-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_006622-T1.exon1ATCC10864_006622-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR033131
InterProIPR000070
InterProIPR018040
PFAMPF01095
InterProIPR012334
InterProIPR011050
Properties
Property NameValue
NoteCAZy:CE8
NoteantiSMASH:Cluster_1000169.1
NoteSECRETED:SignalP(1-17)
ProductPectinesterase 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000169supercontigMCQH01000169:197102..198427 -
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