You are here

Home

ATCC10864_006846-T1, ATCC10864_006846-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_006846-T1
Unique NameATCC10864_006846-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000170:40873..42300+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_006846-T1 ID=ATCC10864_006846-T1|Name=ATCC10864_006846-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1428bp|location=Sequence derived from alignment at MCQH01000170:40873..42300+ (Aspergillus niger ATCC 10864)
ATGGCTCGTATCGATTTGTCCGAGTTGACTATCGCCAAAGTGCACACGGC
ATTCCGCCGCGGAGACTACAGTGCCGTGGATCTGGTCCAAGCTTATTTGA
GACGCATCGACCAGGTGAACCCGCGGCTCAATGCCATCCTAGCCATCAAC
CCGAATGCGGTCCAAGAAGCTCAAGCCCTGGACGATGCCTTCCGAGCCTC
CCGCACATTACGCCCACTCCATGGGGTGCCAGTGCTGGTGAAGGACAATA
TCTTCACCACCGTGATGCCGACCACTTATGGTTCCAAGGTCGCCGCGTCG
CGCCCAATATTACCCCTCGACGATGCTCAGGTGATCAAACAGCTGCAAAG
CGCCGGGGCCATCATTCTGGCGAAGACCACTCTGCCGGATTGGGCGACCG
ACTTCTTCAGCGCCTCGACTGTCTCGACGTGGACCCAGAACCCCTATGAC
TTGGCTCGGGACCCGGGCGGTTCCAGCAGCGGCACCGCCGCGGGGATCGC
AGCCAACCTGGCCTTGGTCGGCGTGGGTACGGACACGGGGGGCTCCATCC
GGCTGCCCTCCTCGTTCTGTAGCTTGGTCGGCATGCGGCCCACCGTCGGC
CTGACCAGCCTGGATGGCGTGTCCCCCTTTGTGGGCTGCCAGGATACCGT
AGGACCGATGTGTCGCACCGTCACCGACGCCGCGCGCTTACTCGACACGC
TTCTCCTGCCCACCAGCCCGCAATCCCTGGCTCCCAGCGGAGGCTCCTAC
GCGGCGCATCTCCTGCCAGACAGCCTCCCGGGTCCCGTTTGTCTGGGCCA
TCTGCCACAGCTGGGTGCGGAGGAGGCGGCCGTGGAGGCACTCTTCACTC
AGGTCCTCACCCGTCTGCGCGGACATGCCTCGGTCACCGTCCGGGACCTC
GACATTCCGAGTCTCTCCTCCACGCTCGCAGCAGCCTCTATCATGCTCAG
CCGTGGCCAACATGATCTCGACGACTTCTTGCGGACCACGGTGGGGACCA
GTCTGAAGACGATCTATCGGGATCACGCCTACCCGCCCACCAACTTCGGA
ATACCGGGGGTAGCAACGCATGCTTCGACCCTGACGGACCGCTCCACGGC
CTCCAACGCCCGCGATGCCCTCGACCGGATAATAACAGCCCATTTGGGCC
AGGCGGGGGTCGAAGTGCTCGTGTTTTTGACCGCAGGACGGGCAGCTCCG
CGCCAGGAGGAGATCACCCCGGAGATGGGAGTGACCTTCCCCGTGCATGC
CATGCTGGCCAGCACGCTGCAGTGGCCAGCCATCTCAGTGCCAATCGGGT
TTACGGCGACCGGCCTGCCCGTGGGACTCGAGATCCTGGGCAGGCCGCTC
AGCGACCAACGCTTGTTAGAAGTGGCCTTTGTTATCGAGCAGATTGTTCA
GGGACGCCGCCCCCCCACCGTAGATTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000170:40873..42300+

>ATCC10864_006846-T1 ID=ATCC10864_006846-T1|Name=ATCC10864_006846-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1428bp|location=Sequence derived from alignment at MCQH01000170:40873..42300+ (Aspergillus niger ATCC 10864)
ATGGCTCGTATCGATTTGTCCGAGTTGACTATCGCCAAAGTGCACACGGC
ATTCCGCCGCGGAGACTACAGTGCCGTGGATCTGGTCCAAGCTTATTTGA
GACGCATCGACCAGGTGAACCCGCGGCTCAATGCCATCCTAGCCATCAAC
CCGAATGCGGTCCAAGAAGCTCAAGCCCTGGACGATGCCTTCCGAGCCTC
CCGCACATTACGCCCACTCCATGGGGTGCCAGTGCTGGTGAAGGACAATA
TCTTCACCACCGTGATGCCGACCACTTATGGTTCCAAGGTCGCCGCGTCG
CGCCCAATATTACCCCTCGACGATGCTCAGGTGATCAAACAGCTGCAAAG
CGCCGGGGCCATCATTCTGGCGAAGACCACTCTGCCGGATTGGGCGACCG
ACTTCTTCAGCGCCTCGACTGTCTCGACGTGGACCCAGAACCCCTATGAC
TTGGCTCGGGACCCGGGCGGTTCCAGCAGCGGCACCGCCGCGGGGATCGC
AGCCAACCTGGCCTTGGTCGGCGTGGGTACGGACACGGGGGGCTCCATCC
GGCTGCCCTCCTCGTTCTGTAGCTTGGTCGGCATGCGGCCCACCGTCGGC
CTGACCAGCCTGGATGGCGTGTCCCCCTTTGTGGGCTGCCAGGATACCGT
AGGACCGATGTGTCGCACCGTCACCGACGCCGCGCGCTTACTCGACACGC
TTCTCCTGCCCACCAGCCCGCAATCCCTGGCTCCCAGCGGAGGCTCCTAC
GCGGCGCATCTCCTGCCAGACAGCCTCCCGGGTCCCGTTTGTCTGGGCCA
TCTGCCACAGCTGGGTGCGGAGGAGGCGGCCGTGGAGGCACTCTTCACTC
AGGTCCTCACCCGTCTGCGCGGACATGCCTCGGTCACCGTCCGGGACCTC
GACATTCCGAGTCTCTCCTCCACGCTCGCAGCAGCCTCTATCATGCTCAG
CCGTGGCCAACATGATCTCGACGACTTCTTGCGGACCACGGTGGGGACCA
GTCTGAAGACGATCTATCGGGATCACGCCTACCCGCCCACCAACTTCGGA
ATACCGGGGGTAGCAACGCATGCTTCGACCCTGACGGACCGCTCCACGGC
CTCCAACGCCCGCGATGCCCTCGACCGGATAATAACAGCCCATTTGGGCC
AGGCGGGGGTCGAAGTGCTCGTGTTTTTGACCGCAGGACGGGCAGCTCCG
CGCCAGGAGGAGATCACCCCGGAGATGGGAGTGACCTTCCCCGTGCATGC
CATGCTGGCCAGCACGCTGCAGTGGCCAGCCATCTCAGTGCCAATCGGGT
TTACGGCGACCGGCCTGCCCGTGGGACTCGAGATCCTGGGCAGGCCGCTC
AGCGACCAACGCTTGTTAGAAGTGGCCTTTGTTATCGAGCAGATTGTTCA
GGGACGCCGCCCCCCCACCGTAGATTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_006846ATCC10864_006846Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006846-T1.exon1ATCC10864_006846-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006846-T1.cdsATCC10864_006846-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_006846-T1ATCC10864_006846-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR020556
InterProIPR036928
InterProIPR023631
PFAMPF01425
Properties
Property NameValue
NoteantiSMASH:Cluster_1000170.1
NoteSMCOG1105:amidase
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000170supercontigMCQH01000170:40873..42300 +
Powered by Drupal