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ATCC10864_007255-T1, ATCC10864_007255-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007255-T1
Unique NameATCC10864_007255-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000173:43068..44613-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007255-T1 ID=ATCC10864_007255-T1|Name=ATCC10864_007255-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1546bp|location=Sequence derived from alignment at MCQH01000173:43068..44613- (Aspergillus niger ATCC 10864)
ATGGTCAAGATCACAAGTTTCACCACGAGGGACGTGAGGTTTCCCGTAAG
TCGCGCACCTATCCTCTCAAGTTCACCCATGTATTTTGCATACCTGCTCA
CCAAATGACAGACCTCCCTCGATAAAACCGGCTCAGATGCCATGAACGCT
GCAGGCGACTACTCCTCCGCCTACTGCATCATCTACACTGACTCCGACTA
CACCGGCCACGGCATGGTACGCACATGACCAACCCTACCTCCACCTTCTC
AGAAACATTCACTAACAATCCTAGACCTTCACCATCGGCCGCGGCAATGA
AATCGTCTGCTCCGCCATCTCCCTCCTCGCTCCCCTCGTGGTCGGCAAAG
ACCTCGACGAACTTACCGCCGACTGGGGCAAGACCTGGCGCTACCTCGTC
TCCGACAGCCAACTGCGCTGGATCGGACCCGAGAAGGGTGTCATCCACCT
GGCCCTTGGTGCCGTCGTCAACGCTCTCTGGGATCTCTGGGCCAAGACCC
TGAACAAACCTGTCTGGCGCATTGTCGCGGACATGACCCCCGAGGAGTTT
GTTCGCTGCATTGACTTCCGCTACATCACGGACGCCATTACACCCGAGGA
GGCAATTGCCCTCCTCAAGGAGGTCGAGGCCGGCAAGCAGGACCGTATCA
AGGAAGCAGAGCAGAGCCAGGCTGTACCGGCCTATACTACCAGTGCGGGT
TGGCTGGGATACAGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGAGAGCGT
CGAGCAGGGATACAAGCACTTTAAGCTGAAGGTTGGCGGAAACGTCGAGG
AAGACCGGAGGAGATTGGCTATTGCTCGTGAAGCTATTGGTTATGACAAG
GGCAACATTCTTATGGTTGATGCCAACCAGGTACCTACCTCCCCACTTCC
ATCCCTACCACCCACAATGCTAACACCTCATGTGAAAAAACAGGTCTGGT
CCGTCCCCGAAGCCATCACCTGGATGCAACAACTCGCCGAATTCAAGCCT
TGGTTCATCGAAGAGCCCACCTCCCCCGACGACATCCTCGGCCACGCCGC
CATCAAGAAGGCCCTCCAAGACACCCCCTACGGCCCCATCGGCGTCGCCA
CTGGCGAAATGTGCCAGAACCGCGTTGTCTTCAAGCAGCTCCTGCAGGCA
GGAGCCCTGACCGTCCTGCAAGCCGATGCCTGCCGTGTCGGCGGTGTCAA
TGAAGTTCTGGCCATCTTGCTGCTTGCGCGCAAGTTCGGCGTGCCGATCG
TGCCTCACTCCGGTGGTGTCGGGTTGCCTGAGTACACTCAGCATCTGAGC
ACGATCGACTACGTGGTGGTCAGTGGAAAGAAGAGTGTGTTGGAGTATGT
GGATCACTTGCACGAGCACTTCGTGCACCCGTCTAGTGTCAAGGATGGAT
ACTATGTTACTCCGATGGAGCCGGGGTATAGTGTTGAGATGAAGGCGGAG
AGCATGGATGCGTTTTCGTTCCCTGGTGAGGAGGGCAAGAGTTGGTGGAG
GTCGGAGGAGGCGAAGACCATTCTGGAGGGGCCCCGGATAGTATAG
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Coding sequence (CDS) from alignment at MCQH01000173:43068..44613-

>ATCC10864_007255-T1 ID=ATCC10864_007255-T1|Name=ATCC10864_007255-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5436bp|location=Sequence derived from alignment at MCQH01000173:43068..44613- (Aspergillus niger ATCC 10864)
GTCTGGTCCGTCCCCGAAGCCATCACCTGGATGCAACAACTCGCCGAATT
CAAGCCTTGGTTCATCGAAGAGCCCACCTCCCCCGACGACATCCTCGGCC
ACGCCGCCATCAAGAAGGCCCTCCAAGACACCCCCTACGGCCCCATCGGC
GTCGCCACTGGCGAAATGTGCCAGAACCGCGTTGTCTTCAAGCAGCTCCT
GCAGGCAGGAGCCCTGACCGTCCTGCAAGCCGATGCCTGCCGTGTCGGCG
GTGTCAATGAAGTTCTGGCCATCTTGCTGCTTGCGCGCAAGTTCGGCGTG
CCGATCGTGCCTCACTCCGGTGGTGTCGGGTTGCCTGAGTACACTCAGCA
TCTGAGCACGATCGACTACGTGGTGGTCAGTGGAAAGAAGAGTGTGTTGG
AGTATGTGGATCACTTGCACGAGCACTTCGTGCACCCGTCTAGTGTCAAG
GATGGATACTATGTTACTCCGATGGAGCCGGGGTATAGTGTTGAGATGAA
GGCGGAGAGCATGGATGCGTTTTCGTTCCCTGGTGAGGAGGGCAAGAGTT
GGTGGAGGTCGGAGGAGGCGAAGACCATTCTGGAGGGGCCCCGGATAGTA
TAGACCTTCACCATCGGCCGCGGCAATGAAATCGTCTGCTCCGCCATCTC
CCTCCTCGCTCCCCTCGTGGTCGGCAAAGACCTCGACGAACTTACCGCCG
ACTGGGGCAAGACCTGGCGCTACCTCGTCTCCGACAGCCAACTGCGCTGG
ATCGGACCCGAGAAGGGTGTCATCCACCTGGCCCTTGGTGCCGTCGTCAA
CGCTCTCTGGGATCTCTGGGCCAAGACCCTGAACAAACCTGTCTGGCGCA
TTGTCGCGGACATGACCCCCGAGGAGTTTGTTCGCTGCATTGACTTCCGC
TACATCACGGACGCCATTACACCCGAGGAGGCAATTGCCCTCCTCAAGGA
GGTCGAGGCCGGCAAGCAGGACCGTATCAAGGAAGCAGAGCAGAGCCAGG
CTGTACCGGCCTATACTACCAGTGCGGGTTGGCTGGGATACAGTGAGGAA
AAGCTGAAAGTCCTTCTCAAGGAGAGCGTCGAGCAGGGATACAAGCACTT
TAAGCTGAAGGTTGGCGGAAACGTCGAGGAAGACCGGAGGAGATTGGCTA
TTGCTCGTGAAGCTATTGGTTATGACAAGGGCAACATTCTTATGGTTGAT
GCCAACCAGACCTCCCTCGATAAAACCGGCTCAGATGCCATGAACGCTGC
AGGCGACTACTCCTCCGCCTACTGCATCATCTACACTGACTCCGACTACA
CCGGCCACGGCATGATGGTCAAGATCACAAGTTTCACCACGAGGGACGTG
AGGTTTCCCGTCTGGTCCGTCCCCGAAGCCATCACCTGGATGCAACAACT
CGCCGAATTCAAGCCTTGGTTCATCGAAGAGCCCACCTCCCCCGACGACA
TCCTCGGCCACGCCGCCATCAAGAAGGCCCTCCAAGACACCCCCTACGGC
CCCATCGGCGTCGCCACTGGCGAAATGTGCCAGAACCGCGTTGTCTTCAA
GCAGCTCCTGCAGGCAGGAGCCCTGACCGTCCTGCAAGCCGATGCCTGCC
GTGTCGGCGGTGTCAATGAAGTTCTGGCCATCTTGCTGCTTGCGCGCAAG
TTCGGCGTGCCGATCGTGCCTCACTCCGGTGGTGTCGGGTTGCCTGAGTA
CACTCAGCATCTGAGCACGATCGACTACGTGGTGGTCAGTGGAAAGAAGA
GTGTGTTGGAGTATGTGGATCACTTGCACGAGCACTTCGTGCACCCGTCT
AGTGTCAAGGATGGATACTATGTTACTCCGATGGAGCCGGGGTATAGTGT
TGAGATGAAGGCGGAGAGCATGGATGCGTTTTCGTTCCCTGGTGAGGAGG
GCAAGAGTTGGTGGAGGTCGGAGGAGGCGAAGACCATTCTGGAGGGGCCC
CGGATAGTATAGACCTTCACCATCGGCCGCGGCAATGAAATCGTCTGCTC
CGCCATCTCCCTCCTCGCTCCCCTCGTGGTCGGCAAAGACCTCGACGAAC
TTACCGCCGACTGGGGCAAGACCTGGCGCTACCTCGTCTCCGACAGCCAA
CTGCGCTGGATCGGACCCGAGAAGGGTGTCATCCACCTGGCCCTTGGTGC
CGTCGTCAACGCTCTCTGGGATCTCTGGGCCAAGACCCTGAACAAACCTG
TCTGGCGCATTGTCGCGGACATGACCCCCGAGGAGTTTGTTCGCTGCATT
GACTTCCGCTACATCACGGACGCCATTACACCCGAGGAGGCAATTGCCCT
CCTCAAGGAGGTCGAGGCCGGCAAGCAGGACCGTATCAAGGAAGCAGAGC
AGAGCCAGGCTGTACCGGCCTATACTACCAGTGCGGGTTGGCTGGGATAC
AGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGAGAGCGTCGAGCAGGGATA
CAAGCACTTTAAGCTGAAGGTTGGCGGAAACGTCGAGGAAGACCGGAGGA
GATTGGCTATTGCTCGTGAAGCTATTGGTTATGACAAGGGCAACATTCTT
ATGGTTGATGCCAACCAGACCTCCCTCGATAAAACCGGCTCAGATGCCAT
GAACGCTGCAGGCGACTACTCCTCCGCCTACTGCATCATCTACACTGACT
CCGACTACACCGGCCACGGCATGATGGTCAAGATCACAAGTTTCACCACG
AGGGACGTGAGGTTTCCCGTCTGGTCCGTCCCCGAAGCCATCACCTGGAT
GCAACAACTCGCCGAATTCAAGCCTTGGTTCATCGAAGAGCCCACCTCCC
CCGACGACATCCTCGGCCACGCCGCCATCAAGAAGGCCCTCCAAGACACC
CCCTACGGCCCCATCGGCGTCGCCACTGGCGAAATGTGCCAGAACCGCGT
TGTCTTCAAGCAGCTCCTGCAGGCAGGAGCCCTGACCGTCCTGCAAGCCG
ATGCCTGCCGTGTCGGCGGTGTCAATGAAGTTCTGGCCATCTTGCTGCTT
GCGCGCAAGTTCGGCGTGCCGATCGTGCCTCACTCCGGTGGTGTCGGGTT
GCCTGAGTACACTCAGCATCTGAGCACGATCGACTACGTGGTGGTCAGTG
GAAAGAAGAGTGTGTTGGAGTATGTGGATCACTTGCACGAGCACTTCGTG
CACCCGTCTAGTGTCAAGGATGGATACTATGTTACTCCGATGGAGCCGGG
GTATAGTGTTGAGATGAAGGCGGAGAGCATGGATGCGTTTTCGTTCCCTG
GTGAGGAGGGCAAGAGTTGGTGGAGGTCGGAGGAGGCGAAGACCATTCTG
GAGGGGCCCCGGATAGTATAGACCTTCACCATCGGCCGCGGCAATGAAAT
CGTCTGCTCCGCCATCTCCCTCCTCGCTCCCCTCGTGGTCGGCAAAGACC
TCGACGAACTTACCGCCGACTGGGGCAAGACCTGGCGCTACCTCGTCTCC
GACAGCCAACTGCGCTGGATCGGACCCGAGAAGGGTGTCATCCACCTGGC
CCTTGGTGCCGTCGTCAACGCTCTCTGGGATCTCTGGGCCAAGACCCTGA
ACAAACCTGTCTGGCGCATTGTCGCGGACATGACCCCCGAGGAGTTTGTT
CGCTGCATTGACTTCCGCTACATCACGGACGCCATTACACCCGAGGAGGC
AATTGCCCTCCTCAAGGAGGTCGAGGCCGGCAAGCAGGACCGTATCAAGG
AAGCAGAGCAGAGCCAGGCTGTACCGGCCTATACTACCAGTGCGGGTTGG
CTGGGATACAGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGAGAGCGTCGA
GCAGGGATACAAGCACTTTAAGCTGAAGGTTGGCGGAAACGTCGAGGAAG
ACCGGAGGAGATTGGCTATTGCTCGTGAAGCTATTGGTTATGACAAGGGC
AACATTCTTATGGTTGATGCCAACCAGACCTCCCTCGATAAAACCGGCTC
AGATGCCATGAACGCTGCAGGCGACTACTCCTCCGCCTACTGCATCATCT
ACACTGACTCCGACTACACCGGCCACGGCATGATGGTCAAGATCACAAGT
TTCACCACGAGGGACGTGAGGTTTCCCGTCTGGTCCGTCCCCGAAGCCAT
CACCTGGATGCAACAACTCGCCGAATTCAAGCCTTGGTTCATCGAAGAGC
CCACCTCCCCCGACGACATCCTCGGCCACGCCGCCATCAAGAAGGCCCTC
CAAGACACCCCCTACGGCCCCATCGGCGTCGCCACTGGCGAAATGTGCCA
GAACCGCGTTGTCTTCAAGCAGCTCCTGCAGGCAGGAGCCCTGACCGTCC
TGCAAGCCGATGCCTGCCGTGTCGGCGGTGTCAATGAAGTTCTGGCCATC
TTGCTGCTTGCGCGCAAGTTCGGCGTGCCGATCGTGCCTCACTCCGGTGG
TGTCGGGTTGCCTGAGTACACTCAGCATCTGAGCACGATCGACTACGTGG
TGGTCAGTGGAAAGAAGAGTGTGTTGGAGTATGTGGATCACTTGCACGAG
CACTTCGTGCACCCGTCTAGTGTCAAGGATGGATACTATGTTACTCCGAT
GGAGCCGGGGTATAGTGTTGAGATGAAGGCGGAGAGCATGGATGCGTTTT
CGTTCCCTGGTGAGGAGGGCAAGAGTTGGTGGAGGTCGGAGGAGGCGAAG
ACCATTCTGGAGGGGCCCCGGATAGTATAGACCTTCACCATCGGCCGCGG
CAATGAAATCGTCTGCTCCGCCATCTCCCTCCTCGCTCCCCTCGTGGTCG
GCAAAGACCTCGACGAACTTACCGCCGACTGGGGCAAGACCTGGCGCTAC
CTCGTCTCCGACAGCCAACTGCGCTGGATCGGACCCGAGAAGGGTGTCAT
CCACCTGGCCCTTGGTGCCGTCGTCAACGCTCTCTGGGATCTCTGGGCCA
AGACCCTGAACAAACCTGTCTGGCGCATTGTCGCGGACATGACCCCCGAG
GAGTTTGTTCGCTGCATTGACTTCCGCTACATCACGGACGCCATTACACC
CGAGGAGGCAATTGCCCTCCTCAAGGAGGTCGAGGCCGGCAAGCAGGACC
GTATCAAGGAAGCAGAGCAGAGCCAGGCTGTACCGGCCTATACTACCAGT
GCGGGTTGGCTGGGATACAGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGA
GAGCGTCGAGCAGGGATACAAGCACTTTAAGCTGAAGGTTGGCGGAAACG
TCGAGGAAGACCGGAGGAGATTGGCTATTGCTCGTGAAGCTATTGGTTAT
GACAAGGGCAACATTCTTATGGTTGATGCCAACCAGACCTCCCTCGATAA
AACCGGCTCAGATGCCATGAACGCTGCAGGCGACTACTCCTCCGCCTACT
GCATCATCTACACTGACTCCGACTACACCGGCCACGGCATGATGGTCAAG
ATCACAAGTTTCACCACGAGGGACGTGAGGTTTCCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009063cellular amino acid catabolic process
GO:0016052carbohydrate catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0050023L-fuconate dehydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LGD1ATCC10864_007255Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007255-T1ATCC10864_007255-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007255-T1.cdsATCC10864_007255-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007255-T1.exon4ATCC10864_007255-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_007255-T1.exon3ATCC10864_007255-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007255-T1.exon2ATCC10864_007255-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007255-T1.exon1ATCC10864_007255-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR029017
InterProIPR018110
InterProIPR034610
InterProIPR013341
InterProIPR036849
PFAMPF13378
InterProIPR013342
InterProIPR029065
PFAMPF02746
Properties
Property NameValue
ProductL-galactonate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000173supercontigMCQH01000173:43068..44613 -
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