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ATCC10864_007278-T1, ATCC10864_007278-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007278-T1
Unique NameATCC10864_007278-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000173:112757..114441-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007278-T1 ID=ATCC10864_007278-T1|Name=ATCC10864_007278-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1685bp|location=Sequence derived from alignment at MCQH01000173:112757..114441- (Aspergillus niger ATCC 10864)
ATGGGAGCAGCAGGCGGCGGTTTCTCCCCCCAAGCCATCAAACAAGTCCC
TCCTGCGGCTCGAGGACTTTACATCTGGTTGGCGATCATCTGGGCCTCGT
ACTGCGGTGGTCTGCATGGTTTTAACACGTCCAATATCTCGGGTGCTATG
CAGATGGAGCAATGGGATCCAGACTTTGGATGGGACAAGCTTTCCAGCAC
GACTGTTTCGAACAATGAGGGCTGGGTGGTATCCTCTATGCTGCTGGTAT
GTGATCTCACACTATATAGCATGAAGTGCATTTACTGAGGCAGTATAACT
TTATGCAGGGCCAAACCGTCGGAGTCTTATTCGCAGGCCCACTAGGGGAA
CGACGGGGCCGAAAGGCAGTCATCCTCGCTGCCGCCATCTGCTACTCGAT
CGGAGCTATTCTCATGGCTGCCAACCTGGGGTCCTTCGCTGAACTCCTGG
TCGGGCGTATTCTTTCCGGATTAGGGTCTGGACTGGGAATGTCAGCAGGA
CCGGTATACATCTCCGAAGTTGCACCCCTCGAGCTGCGCGGAATGATGAC
GACCTTCTACAACGTGAGCATCATGGGCGGCGTTACAGGCAGTTACTGGA
TCAACTACGCCTCGTTGCTCGTCATCCCCGACAGTTCCAGCTGGCAATGG
CGCACCACACTTGTCCTGCAATCCATCCCGGCCATCATCCTCTTCCTCGG
ATTCCCCTTCTTCCCCGAAAGCCCTCGCTACCTCATGATGCGCGGCCACG
TCGACGCTGCCCGGCGCAGCCTGTCCCGCCTGCGCGGCGGCATGGACGAA
AGCACTGAGTACTTCGCCCGCGAATATGCCGAACTCCTCAGCAAGCTCGA
CACCACGTCCACAACAATCACTCCCACGAAAGCCTTCCTATCCCTTCTCC
ACGAATGCATCAATCACCCGCCGACCCGCAAAATCCTCCTCTTCGTCACT
CTCATTCAAACCTTCTTCATCATGAGTGGAGGCAATAGCATCACCTACTA
CGCCCCAAATATACTCGAATCTATCGGCCTTGGCCATTCAGAAGTCCTCC
TTTTCACCGCCATCTACGGCCTCGTCAAGCTCCTCTCCGTCTTATTCTAC
GCCTGGTTCCTAACGGAACGCTTCGGCCGGCGTCCTCTCCTGCTGATCGG
CTCCACAATCAACGTCCTCTGTCTGCTGTACCTGACGTGCTATCTTGCCC
TCAGCCCACCCTCATCGTCAGGAACAGCTTCCCCTTCCGCCGCGTCGTAT
GTTTGCATTGTCGCGATCTGCATCTACGCCATAGGCTACGGCTTCGGCTG
GGCGCCCGTGTTCTCCCTCACAGCGTCGGAGATCTGTCCGACCCGGATAC
GCGGCACGGTAGTGACGCTTGCTTTCACGTACCAGAACCTGCTCAATTTT
GGGATTACACGCGGGTTCCCCAGTATGACGGAGAGCATGCAGTCTTGGGG
CCCGTTTGCGCTGTTCACGGCGTTCACGACGCTCGCGACGGTGTGGGTGG
GGGTTGGGTTCCCGGAGTGTAAGGGAAGAAGTATGGAGAAGATGGAGGAG
GTGTTTACGAGGAGTTGGTGGAAGATAGGGTGGGCGAAGGTGCCGGAAGA
GAGGAGAGTGGAAGATGGTCAGGAGGTGGGTGATGTTGGGGGTGAGGTAG
AGAAGGGAAGCAGTTCCCATGAGGAGAAGGTATAA
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Coding sequence (CDS) from alignment at MCQH01000173:112757..114441-

>ATCC10864_007278-T1 ID=ATCC10864_007278-T1|Name=ATCC10864_007278-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3246bp|location=Sequence derived from alignment at MCQH01000173:112757..114441- (Aspergillus niger ATCC 10864)
GGCCAAACCGTCGGAGTCTTATTCGCAGGCCCACTAGGGGAACGACGGGG
CCGAAAGGCAGTCATCCTCGCTGCCGCCATCTGCTACTCGATCGGAGCTA
TTCTCATGGCTGCCAACCTGGGGTCCTTCGCTGAACTCCTGGTCGGGCGT
ATTCTTTCCGGATTAGGGTCTGGACTGGGAATGTCAGCAGGACCGGTATA
CATCTCCGAAGTTGCACCCCTCGAGCTGCGCGGAATGATGACGACCTTCT
ACAACGTGAGCATCATGGGCGGCGTTACAGGCAGTTACTGGATCAACTAC
GCCTCGTTGCTCGTCATCCCCGACAGTTCCAGCTGGCAATGGCGCACCAC
ACTTGTCCTGCAATCCATCCCGGCCATCATCCTCTTCCTCGGATTCCCCT
TCTTCCCCGAAAGCCCTCGCTACCTCATGATGCGCGGCCACGTCGACGCT
GCCCGGCGCAGCCTGTCCCGCCTGCGCGGCGGCATGGACGAAAGCACTGA
GTACTTCGCCCGCGAATATGCCGAACTCCTCAGCAAGCTCGACACCACGT
CCACAACAATCACTCCCACGAAAGCCTTCCTATCCCTTCTCCACGAATGC
ATCAATCACCCGCCGACCCGCAAAATCCTCCTCTTCGTCACTCTCATTCA
AACCTTCTTCATCATGAGTGGAGGCAATAGCATCACCTACTACGCCCCAA
ATATACTCGAATCTATCGGCCTTGGCCATTCAGAAGTCCTCCTTTTCACC
GCCATCTACGGCCTCGTCAAGCTCCTCTCCGTCTTATTCTACGCCTGGTT
CCTAACGGAACGCTTCGGCCGGCGTCCTCTCCTGCTGATCGGCTCCACAA
TCAACGTCCTCTGTCTGCTGTACCTGACGTGCTATCTTGCCCTCAGCCCA
CCCTCATCGTCAGGAACAGCTTCCCCTTCCGCCGCGTCGTATGTTTGCAT
TGTCGCGATCTGCATCTACGCCATAGGCTACGGCTTCGGCTGGGCGCCCG
TGTTCTCCCTCACAGCGTCGGAGATCTGTCCGACCCGGATACGCGGCACG
GTAGTGACGCTTGCTTTCACGTACCAGAACCTGCTCAATTTTGGGATTAC
ACGCGGGTTCCCCAGTATGACGGAGAGCATGCAGTCTTGGGGCCCGTTTG
CGCTGTTCACGGCGTTCACGACGCTCGCGACGGTGTGGGTGGGGGTTGGG
TTCCCGGAGTGTAAGGGAAGAAGTATGGAGAAGATGGAGGAGGTGTTTAC
GAGGAGTTGGTGGAAGATAGGGTGGGCGAAGGTGCCGGAAGAGAGGAGAG
TGGAAGATGGTCAGGAGGTGGGTGATGTTGGGGGTGAGGTAGAGAAGGGA
AGCAGTTCCCATGAGGAGAAGGTATAAATGGGAGCAGCAGGCGGCGGTTT
CTCCCCCCAAGCCATCAAACAAGTCCCTCCTGCGGCTCGAGGACTTTACA
TCTGGTTGGCGATCATCTGGGCCTCGTACTGCGGTGGTCTGCATGGTTTT
AACACGTCCAATATCTCGGGTGCTATGCAGATGGAGCAATGGGATCCAGA
CTTTGGATGGGACAAGCTTTCCAGCACGACTGTTTCGAACAATGAGGGCT
GGGTGGTATCCTCTATGCTGCTGGGCCAAACCGTCGGAGTCTTATTCGCA
GGCCCACTAGGGGAACGACGGGGCCGAAAGGCAGTCATCCTCGCTGCCGC
CATCTGCTACTCGATCGGAGCTATTCTCATGGCTGCCAACCTGGGGTCCT
TCGCTGAACTCCTGGTCGGGCGTATTCTTTCCGGATTAGGGTCTGGACTG
GGAATGTCAGCAGGACCGGTATACATCTCCGAAGTTGCACCCCTCGAGCT
GCGCGGAATGATGACGACCTTCTACAACGTGAGCATCATGGGCGGCGTTA
CAGGCAGTTACTGGATCAACTACGCCTCGTTGCTCGTCATCCCCGACAGT
TCCAGCTGGCAATGGCGCACCACACTTGTCCTGCAATCCATCCCGGCCAT
CATCCTCTTCCTCGGATTCCCCTTCTTCCCCGAAAGCCCTCGCTACCTCA
TGATGCGCGGCCACGTCGACGCTGCCCGGCGCAGCCTGTCCCGCCTGCGC
GGCGGCATGGACGAAAGCACTGAGTACTTCGCCCGCGAATATGCCGAACT
CCTCAGCAAGCTCGACACCACGTCCACAACAATCACTCCCACGAAAGCCT
TCCTATCCCTTCTCCACGAATGCATCAATCACCCGCCGACCCGCAAAATC
CTCCTCTTCGTCACTCTCATTCAAACCTTCTTCATCATGAGTGGAGGCAA
TAGCATCACCTACTACGCCCCAAATATACTCGAATCTATCGGCCTTGGCC
ATTCAGAAGTCCTCCTTTTCACCGCCATCTACGGCCTCGTCAAGCTCCTC
TCCGTCTTATTCTACGCCTGGTTCCTAACGGAACGCTTCGGCCGGCGTCC
TCTCCTGCTGATCGGCTCCACAATCAACGTCCTCTGTCTGCTGTACCTGA
CGTGCTATCTTGCCCTCAGCCCACCCTCATCGTCAGGAACAGCTTCCCCT
TCCGCCGCGTCGTATGTTTGCATTGTCGCGATCTGCATCTACGCCATAGG
CTACGGCTTCGGCTGGGCGCCCGTGTTCTCCCTCACAGCGTCGGAGATCT
GTCCGACCCGGATACGCGGCACGGTAGTGACGCTTGCTTTCACGTACCAG
AACCTGCTCAATTTTGGGATTACACGCGGGTTCCCCAGTATGACGGAGAG
CATGCAGTCTTGGGGCCCGTTTGCGCTGTTCACGGCGTTCACGACGCTCG
CGACGGTGTGGGTGGGGGTTGGGTTCCCGGAGTGTAAGGGAAGAAGTATG
GAGAAGATGGAGGAGGTGTTTACGAGGAGTTGGTGGAAGATAGGGTGGGC
GAAGGTGCCGGAAGAGAGGAGAGTGGAAGATGGTCAGGAGGTGGGTGATG
TTGGGGGTGAGGTAGAGAAGGGAAGCAGTTCCCATGAGGAGAAGGTATAA
ATGGGAGCAGCAGGCGGCGGTTTCTCCCCCCAAGCCATCAAACAAGTCCC
TCCTGCGGCTCGAGGACTTTACATCTGGTTGGCGATCATCTGGGCCTCGT
ACTGCGGTGGTCTGCATGGTTTTAACACGTCCAATATCTCGGGTGCTATG
CAGATGGAGCAATGGGATCCAGACTTTGGATGGGACAAGCTTTCCAGCAC
GACTGTTTCGAACAATGAGGGCTGGGTGGTATCCTCTATGCTGCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007278ATCC10864_007278Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007278-T1ATCC10864_007278-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007278-T1.cdsATCC10864_007278-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007278-T1.exon2ATCC10864_007278-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007278-T1.exon1ATCC10864_007278-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF07690
InterProIPR036259
PFAMPF00083
InterProIPR020846
InterProIPR005828
InterProIPR003663
InterProIPR005829
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000173supercontigMCQH01000173:112757..114441 -
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