You are here

Home

ATCC10864_007574-T1, ATCC10864_007574-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007574-T1
Unique NameATCC10864_007574-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000184:735657..736688-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007574-T1 ID=ATCC10864_007574-T1|Name=ATCC10864_007574-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1032bp|location=Sequence derived from alignment at MCQH01000184:735657..736688- (Aspergillus niger ATCC 10864)
ATGTCGCTCGAAGCTACCATGATCATGTCCGTTTAGCCACCTTCATCCCA
AGCTCTGTGCGCACCTACTAACGCCATCTACAGTGTCGACAATAGCGAAA
GCAGCAGAAATGGAGATTATACGTAAGTTAACTGTTCTAAATCGCCCAGA
ATCGACCGTCTGGTTCCGCCTCTAACAGCTGCCAGCTCGACACGATGGCA
AGCTCAGATCGACGCCGTGAGCGTCATTCACACCACTAAGATGCGCGTGC
ACCCTCAGTCTGCTGTCGGTCTTATGAGCATGGGCGGAAAAGGTCCCGAG
GTCCTTTCGACATTTACTTCCGACTTTGGTGGTATCCTGGCCGGTCTGCA
TCGCACGAAGATCCATGGCACTGCCCACCTTAGCTCCAGCATACAAGTGG
CCGGTGTATGTTCAAACGACTCCATCATCTCTTCAGATAGATACTGTACG
GGATTGATTGCATTGCTAACCTGATGATTGGCGCAGCTTGCCCTCAAACA
CCGCTCCGAGAAGTCCCAGAGACAGCGCATCATCGTGTTCTCCTGCTCTC
CCATCGAAGAAGACGAGAAGACATTAGTGAAGCTGGCCAAGAAGATGAAG
AAGAACAACGTGTCCATCGATGTAATTGCCTTTGGAGATCTGGAATCCGA
TCAGACCAAGAAACTAGAGGCCTTCGTCGAGAACGTCAAGGGTGGTGACG
GCTCTAACCTCGCCATCATTCCCCCGGGCCCCAACTTGCTGAGTGAGGAG
CTTCAGGTTACTCCCATTCTGGGCGGGGACAGCTCCGGTGCCGATGGTGC
AGGTCCTGAAGGCGGCGATGGTGCCTTTGGGTTCGAGGATGCGGCTGAGA
ACGACCCCGAACTGGCATTCGCCCTCCGTCTATCTTTGGAAGAGGAGAAG
AACCGGCAAGAGAAGGAAAAGCGCGACCGGGAGGAGCAAGAGCGCAAAGC
CAACCTGGACAACATTCCCGAGGAGGGCTCCAGTGGGAGCAAAGACAAGA
AAGAGGATGGTGACAAGATGGACACTGCTTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000184:735657..736688-

>ATCC10864_007574-T1 ID=ATCC10864_007574-T1|Name=ATCC10864_007574-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3324bp|location=Sequence derived from alignment at MCQH01000184:735657..736688- (Aspergillus niger ATCC 10864)
CTTGCCCTCAAACACCGCTCCGAGAAGTCCCAGAGACAGCGCATCATCGT
GTTCTCCTGCTCTCCCATCGAAGAAGACGAGAAGACATTAGTGAAGCTGG
CCAAGAAGATGAAGAAGAACAACGTGTCCATCGATGTAATTGCCTTTGGA
GATCTGGAATCCGATCAGACCAAGAAACTAGAGGCCTTCGTCGAGAACGT
CAAGGGTGGTGACGGCTCTAACCTCGCCATCATTCCCCCGGGCCCCAACT
TGCTGAGTGAGGAGCTTCAGGTTACTCCCATTCTGGGCGGGGACAGCTCC
GGTGCCGATGGTGCAGGTCCTGAAGGCGGCGATGGTGCCTTTGGGTTCGA
GGATGCGGCTGAGAACGACCCCGAACTGGCATTCGCCCTCCGTCTATCTT
TGGAAGAGGAGAAGAACCGGCAAGAGAAGGAAAAGCGCGACCGGGAGGAG
CAAGAGCGCAAAGCCAACCTGGACAACATTCCCGAGGAGGGCTCCAGTGG
GAGCAAAGACAAGAAAGAGGATGGTGACAAGATGGACACTGCTTAACTCG
ACACGATGGCAAGCTCAGATCGACGCCGTGAGCGTCATTCACACCACTAA
GATGCGCGTGCACCCTCAGTCTGCTGTCGGTCTTATGAGCATGGGCGGAA
AAGGTCCCGAGGTCCTTTCGACATTTACTTCCGACTTTGGTGGTATCCTG
GCCGGTCTGCATCGCACGAAGATCCATGGCACTGCCCACCTTAGCTCCAG
CATACAAGTGGCCGGTTGTCGACAATAGCGAAAGCAGCAGAAATGGAGAT
TATACATGTCGCTCGAAGCTACCATGATCATCTTGCCCTCAAACACCGCT
CCGAGAAGTCCCAGAGACAGCGCATCATCGTGTTCTCCTGCTCTCCCATC
GAAGAAGACGAGAAGACATTAGTGAAGCTGGCCAAGAAGATGAAGAAGAA
CAACGTGTCCATCGATGTAATTGCCTTTGGAGATCTGGAATCCGATCAGA
CCAAGAAACTAGAGGCCTTCGTCGAGAACGTCAAGGGTGGTGACGGCTCT
AACCTCGCCATCATTCCCCCGGGCCCCAACTTGCTGAGTGAGGAGCTTCA
GGTTACTCCCATTCTGGGCGGGGACAGCTCCGGTGCCGATGGTGCAGGTC
CTGAAGGCGGCGATGGTGCCTTTGGGTTCGAGGATGCGGCTGAGAACGAC
CCCGAACTGGCATTCGCCCTCCGTCTATCTTTGGAAGAGGAGAAGAACCG
GCAAGAGAAGGAAAAGCGCGACCGGGAGGAGCAAGAGCGCAAAGCCAACC
TGGACAACATTCCCGAGGAGGGCTCCAGTGGGAGCAAAGACAAGAAAGAG
GATGGTGACAAGATGGACACTGCTTAACTCGACACGATGGCAAGCTCAGA
TCGACGCCGTGAGCGTCATTCACACCACTAAGATGCGCGTGCACCCTCAG
TCTGCTGTCGGTCTTATGAGCATGGGCGGAAAAGGTCCCGAGGTCCTTTC
GACATTTACTTCCGACTTTGGTGGTATCCTGGCCGGTCTGCATCGCACGA
AGATCCATGGCACTGCCCACCTTAGCTCCAGCATACAAGTGGCCGGTTGT
CGACAATAGCGAAAGCAGCAGAAATGGAGATTATACATGTCGCTCGAAGC
TACCATGATCATCTTGCCCTCAAACACCGCTCCGAGAAGTCCCAGAGACA
GCGCATCATCGTGTTCTCCTGCTCTCCCATCGAAGAAGACGAGAAGACAT
TAGTGAAGCTGGCCAAGAAGATGAAGAAGAACAACGTGTCCATCGATGTA
ATTGCCTTTGGAGATCTGGAATCCGATCAGACCAAGAAACTAGAGGCCTT
CGTCGAGAACGTCAAGGGTGGTGACGGCTCTAACCTCGCCATCATTCCCC
CGGGCCCCAACTTGCTGAGTGAGGAGCTTCAGGTTACTCCCATTCTGGGC
GGGGACAGCTCCGGTGCCGATGGTGCAGGTCCTGAAGGCGGCGATGGTGC
CTTTGGGTTCGAGGATGCGGCTGAGAACGACCCCGAACTGGCATTCGCCC
TCCGTCTATCTTTGGAAGAGGAGAAGAACCGGCAAGAGAAGGAAAAGCGC
GACCGGGAGGAGCAAGAGCGCAAAGCCAACCTGGACAACATTCCCGAGGA
GGGCTCCAGTGGGAGCAAAGACAAGAAAGAGGATGGTGACAAGATGGACA
CTGCTTAACTCGACACGATGGCAAGCTCAGATCGACGCCGTGAGCGTCAT
TCACACCACTAAGATGCGCGTGCACCCTCAGTCTGCTGTCGGTCTTATGA
GCATGGGCGGAAAAGGTCCCGAGGTCCTTTCGACATTTACTTCCGACTTT
GGTGGTATCCTGGCCGGTCTGCATCGCACGAAGATCCATGGCACTGCCCA
CCTTAGCTCCAGCATACAAGTGGCCGGTTGTCGACAATAGCGAAAGCAGC
AGAAATGGAGATTATACATGTCGCTCGAAGCTACCATGATCATCTTGCCC
TCAAACACCGCTCCGAGAAGTCCCAGAGACAGCGCATCATCGTGTTCTCC
TGCTCTCCCATCGAAGAAGACGAGAAGACATTAGTGAAGCTGGCCAAGAA
GATGAAGAAGAACAACGTGTCCATCGATGTAATTGCCTTTGGAGATCTGG
AATCCGATCAGACCAAGAAACTAGAGGCCTTCGTCGAGAACGTCAAGGGT
GGTGACGGCTCTAACCTCGCCATCATTCCCCCGGGCCCCAACTTGCTGAG
TGAGGAGCTTCAGGTTACTCCCATTCTGGGCGGGGACAGCTCCGGTGCCG
ATGGTGCAGGTCCTGAAGGCGGCGATGGTGCCTTTGGGTTCGAGGATGCG
GCTGAGAACGACCCCGAACTGGCATTCGCCCTCCGTCTATCTTTGGAAGA
GGAGAAGAACCGGCAAGAGAAGGAAAAGCGCGACCGGGAGGAGCAAGAGC
GCAAAGCCAACCTGGACAACATTCCCGAGGAGGGCTCCAGTGGGAGCAAA
GACAAGAAAGAGGATGGTGACAAGATGGACACTGCTTAACTCGACACGAT
GGCAAGCTCAGATCGACGCCGTGAGCGTCATTCACACCACTAAGATGCGC
GTGCACCCTCAGTCTGCTGTCGGTCTTATGAGCATGGGCGGAAAAGGTCC
CGAGGTCCTTTCGACATTTACTTCCGACTTTGGTGGTATCCTGGCCGGTC
TGCATCGCACGAAGATCCATGGCACTGCCCACCTTAGCTCCAGCATACAA
GTGGCCGGTTGTCGACAATAGCGAAAGCAGCAGAAATGGAGATTATACAT
GTCGCTCGAAGCTACCATGATCAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0008540proteasome regulatory particle, base subcomplex
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007574ATCC10864_007574Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007574-T1ATCC10864_007574-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007574-T1.cdsATCC10864_007574-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007574-T1.exon4ATCC10864_007574-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_007574-T1.exon3ATCC10864_007574-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007574-T1.exon2ATCC10864_007574-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007574-T1.exon1ATCC10864_007574-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036465
InterProIPR002035
PFAMPF04056
InterProIPR027040
InterProIPR003903
PFAMPF13519
Properties
Property NameValue
NoteBUSCO:EOG09264XF3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000184supercontigMCQH01000184:735657..736688 -
Powered by Drupal