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ATCC10864_007903-T1, ATCC10864_007903-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_007903-T1
Unique NameATCC10864_007903-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000188:172812..174522+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_007903-T1 ID=ATCC10864_007903-T1|Name=ATCC10864_007903-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1711bp|location=Sequence derived from alignment at MCQH01000188:172812..174522+ (Aspergillus niger ATCC 10864)
ATGCGTCTCGTTCGAGATTGCCTGTATGGGGGGTTATTCCTTAACACGGC
GCTCTTCTCCCAGCTCTCCCACGCCATCGATATCGATATCAGCAGTACCA
GTATGCCTTCCCCCCACTTCTTCAATCTCTTTCCCATTATATACACCACT
GTCTCGGCCCTTGCTTTATTCCGTCATCCTTCTCCTCTCCTACATACTTG
GACGCAGTTGCGCCACTATATCTAAGACTCCATGCCTTCCATTCCAACGA
CATACATAAATACCATGAATTGACAACTGATACACATTTTTATTGTCCGT
ATAGGTTCAATTAAAGATGCCGCCAGTAAGACGGCCTACGGGTCCATGAC
CTGGTATCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCCTAGCA
AGTGGTGGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACTGGTAT
TACACTGGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATGCAATG
GCAGGCGGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTACCTGG
TAAGTGACCTGACCACACCCATCCCCCCTGAACTTGGACAATAGTCTGAC
TCTCGTCGCTGTTCACTAGGGTAACGACGATCAAATGTTCTGGGGTCTTG
CCGCCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCGGATAT
TCCTGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGACCGATG
GGATGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCCTTACG
AGGCCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGTTCCAA
CTCGCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCCGACTG
GGCAGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAACAACG
AGACTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCTCCACC
CAAGGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACGGGAGC
CGCGTACATGTACAACTATGTGAGTGATTCCGACCCCCTTGAGGTACGAA
GGAAACATGTGCTGATTTGACGCCATTCACAGACCGGCAAGGCCAAGTGG
AAGACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCGACACCTTTTTCCC
GGCGAAGTATGGTGGAAACATCATGTCCGAAATTCTCTGTGAGCCGACCG
AAGTGTGCAATGACAACGAAATTCTGTTCAAGGGTCTCGTCACCGGATGG
CTTGGACTTGTGGCCCTAGTGATGCCGTCGACGTATGATAGCATTTTGCC
AAAGCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCCTGCAGCGGAATGA
GCAACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAAGTGGGATGGATGG
AACGGAATGGAGGAGGAAATCGCCGTCACCAACGTTCTATCCTCCGCGTT
GGTCAACACGAAGAAAACCGCCCCTGTGACCTCCAGCACCGGAGGCAATA
GTAGTAGTGATCCGAACGCAGGTACGGGCGACAACACCGGGAGCAGCGGC
AGTACCGAATCGAAGATCACCACGGGCGACAAGGCGGGTGCCTCCATCCT
GACCATTGCCTTTGTGGGCATGTGGGGAGGTATGATCGCTTGGATGGTCA
TTGGCGGTTGA
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Coding sequence (CDS) from alignment at MCQH01000188:172812..174522+

>ATCC10864_007903-T1 ID=ATCC10864_007903-T1|Name=ATCC10864_007903-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5496bp|location=Sequence derived from alignment at MCQH01000188:172812..174522+ (Aspergillus niger ATCC 10864)
ATGCGTCTCGTTCGAGATTGCCTGTATGGGGGGTTATTCCTTAACACGGC
GCTCTTCTCCCAGCTCTCCCACGCCATCGATATCGATATCAGCAGTACCA
GTTCAATTAAAGATGCCGCCAGTAAGACGGCCTACGGGTCCATGACCTGG
TATCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCCTAGCAAGTG
GTGGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACTGGTATTACA
CTGGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATGCAATGGCAG
GCGGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTACCTGGGTAA
CGACGATCAAATGTTCTGGGGTCTTGCCGCCATCACCGCTGCCGAGATCG
AATTCGCCGACAGCTCCTCCGGATATTCCTGGCTCGCTTTGGCCCAGGGT
GTTTACAACACTCAGATCGACCGATGGGATGATTCGACATGTGGCGGCGG
TTTGCGCTGGCAGATCTACCCTTACGAGGCCGGTTACGCCATGAAGAACT
CCATCTCGAACGGAGGTTTGTTCCAACTCGCCGCCCGCCTGGCCCGCTAC
ACCTCAAACGACACATACGCCGACTGGGCAGAGAAGATCTTCGATTGGTG
TGCCTCGACTCCGTTGCTAAACAACGAGACTTGGAACGTGGCCGACTCCA
CCGATGTCGATAACAGCTGCTCCACCCAAGGCAACAACCAGTGGTCTTAC
AACTACGGCGTGTTCTTGACGGGAGCCGCGTACATGTACAACTATACCGG
CAAGGCCAAGTGGAAGACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCG
ACACCTTTTTCCCGGCGAAGTATGGTGGAAACATCATGTCCGAAATTCTC
TGTGAGCCGACCGAAGTGTGCAATGACAACGAAATTCTGTTCAAGGGTCT
CGTCACCGGATGGCTTGGACTTGTGGCCCTAGTGATGCCGTCGACGTATG
ATAGCATTTTGCCAAAGCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCC
TGCAGCGGAATGAGCAACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAA
GTGGGATGGATGGAACGGAATGGAGGAGGAAATCGCCGTCACCAACGTTC
TATCCTCCGCGTTGGTCAACACGAAGAAAACCGCCCCTGTGACCTCCAGC
ACCGGAGGCAATAGTAGTAGTGATCCGAACGCAGGTACGGGCGACAACAC
CGGGAGCAGCGGCAGTACCGAATCGAAGATCACCACGGGCGACAAGGCGG
GTGCCTCCATCCTGACCATTGCCTTTGTGGGCATGTGGGGAGGTATGATC
GCTTGGATGGTCATTGGCGGTTGAATGCGTCTCGTTCGAGATTGCCTGTA
TGGGGGGTTATTCCTTAACACGGCGCTCTTCTCCCAGCTCTCCCACGCCA
TCGATATCGATATCAGCAGTACCAGTTCAATTAAAGATGCCGCCAGTAAG
ACGGCCTACGGGTCCATGACCTGGTATCATGGAAACGAAACCGGTCAGAT
TCCCGGTGCTTTCCCTAGCAAGTGGTGGGAGGGTAGCGCGCTTTTCACAA
GTTTGCTCCTCTACTGGTATTACACTGGAGACAGTACCTACAACGACGAG
GTCCGTCAGGGTATGCAATGGCAGGCGGGTGACTGCGATTACATGCCCGC
CAATTACAGTAGTTACCTGGGTAACGACGATCAAATGTTCTGGGGTCTTG
CCGCCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCGGATAT
TCCTGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGACCGATG
GGATGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCCTTACG
AGGCCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGTTCCAA
CTCGCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCCGACTG
GGCAGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAACAACG
AGACTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCTCCACC
CAAGGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACGGGAGC
CGCGTACATGTACAACTATACCGGCAAGGCCAAGTGGAAGACTGCGGCGG
AGGGCCTCTTGAACGTCACGCTCGACACCTTTTTCCCGGCGAAGTATGGT
GGAAACATCATGTCCGAAATTCTCTGTGAGCCGACCGAAGTGTGCAATGA
CAACGAAATTCTGTTCAAGGGTCTCGTCACCGGATGGCTTGGACTTGTGG
CCCTAGTGATGCCGTCGACGTATGATAGCATTTTGCCAAAGCTGCAGGGG
TCTGCCGAAGCTGCCGCAGCCTCCTGCAGCGGAATGAGCAACAACACTTG
TGGTGTGCGCTGGTGGCCCAAGAAGTGGGATGGATGGAACGGAATGGAGG
AGGAAATCGCCGTCACCAACGTTCTATCCTCCGCGTTGGTCAACACGAAG
AAAACCGCCCCTGTGACCTCCAGCACCGGAGGCAATAGTAGTAGTGATCC
GAACGCAGGTACGGGCGACAACACCGGGAGCAGCGGCAGTACCGAATCGA
AGATCACCACGGGCGACAAGGCGGGTGCCTCCATCCTGACCATTGCCTTT
GTGGGCATGTGGGGAGGTATGATCGCTTGGATGGTCATTGGCGGTTGAAT
GCGTCTCGTTCGAGATTGCCTGTATGGGGGGTTATTCCTTAACACGGCGC
TCTTCTCCCAGCTCTCCCACGCCATCGATATCGATATCAGCAGTACCAGT
TCAATTAAAGATGCCGCCAGTAAGACGGCCTACGGGTCCATGACCTGGTA
TCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCCTAGCAAGTGGT
GGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACTGGTATTACACT
GGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATGCAATGGCAGGC
GGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTACCTGGGTAACG
ACGATCAAATGTTCTGGGGTCTTGCCGCCATCACCGCTGCCGAGATCGAA
TTCGCCGACAGCTCCTCCGGATATTCCTGGCTCGCTTTGGCCCAGGGTGT
TTACAACACTCAGATCGACCGATGGGATGATTCGACATGTGGCGGCGGTT
TGCGCTGGCAGATCTACCCTTACGAGGCCGGTTACGCCATGAAGAACTCC
ATCTCGAACGGAGGTTTGTTCCAACTCGCCGCCCGCCTGGCCCGCTACAC
CTCAAACGACACATACGCCGACTGGGCAGAGAAGATCTTCGATTGGTGTG
CCTCGACTCCGTTGCTAAACAACGAGACTTGGAACGTGGCCGACTCCACC
GATGTCGATAACAGCTGCTCCACCCAAGGCAACAACCAGTGGTCTTACAA
CTACGGCGTGTTCTTGACGGGAGCCGCGTACATGTACAACTATACCGGCA
AGGCCAAGTGGAAGACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCGAC
ACCTTTTTCCCGGCGAAGTATGGTGGAAACATCATGTCCGAAATTCTCTG
TGAGCCGACCGAAGTGTGCAATGACAACGAAATTCTGTTCAAGGGTCTCG
TCACCGGATGGCTTGGACTTGTGGCCCTAGTGATGCCGTCGACGTATGAT
AGCATTTTGCCAAAGCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCCTG
CAGCGGAATGAGCAACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAAGT
GGGATGGATGGAACGGAATGGAGGAGGAAATCGCCGTCACCAACGTTCTA
TCCTCCGCGTTGGTCAACACGAAGAAAACCGCCCCTGTGACCTCCAGCAC
CGGAGGCAATAGTAGTAGTGATCCGAACGCAGGTACGGGCGACAACACCG
GGAGCAGCGGCAGTACCGAATCGAAGATCACCACGGGCGACAAGGCGGGT
GCCTCCATCCTGACCATTGCCTTTGTGGGCATGTGGGGAGGTATGATCGC
TTGGATGGTCATTGGCGGTTGAATGCGTCTCGTTCGAGATTGCCTGTATG
GGGGGTTATTCCTTAACACGGCGCTCTTCTCCCAGCTCTCCCACGCCATC
GATATCGATATCAGCAGTACCAGTTCAATTAAAGATGCCGCCAGTAAGAC
GGCCTACGGGTCCATGACCTGGTATCATGGAAACGAAACCGGTCAGATTC
CCGGTGCTTTCCCTAGCAAGTGGTGGGAGGGTAGCGCGCTTTTCACAAGT
TTGCTCCTCTACTGGTATTACACTGGAGACAGTACCTACAACGACGAGGT
CCGTCAGGGTATGCAATGGCAGGCGGGTGACTGCGATTACATGCCCGCCA
ATTACAGTAGTTACCTGGGTAACGACGATCAAATGTTCTGGGGTCTTGCC
GCCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCGGATATTC
CTGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGACCGATGGG
ATGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCCTTACGAG
GCCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGTTCCAACT
CGCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCCGACTGGG
CAGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAACAACGAG
ACTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCTCCACCCA
AGGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACGGGAGCCG
CGTACATGTACAACTATACCGGCAAGGCCAAGTGGAAGACTGCGGCGGAG
GGCCTCTTGAACGTCACGCTCGACACCTTTTTCCCGGCGAAGTATGGTGG
AAACATCATGTCCGAAATTCTCTGTGAGCCGACCGAAGTGTGCAATGACA
ACGAAATTCTGTTCAAGGGTCTCGTCACCGGATGGCTTGGACTTGTGGCC
CTAGTGATGCCGTCGACGTATGATAGCATTTTGCCAAAGCTGCAGGGGTC
TGCCGAAGCTGCCGCAGCCTCCTGCAGCGGAATGAGCAACAACACTTGTG
GTGTGCGCTGGTGGCCCAAGAAGTGGGATGGATGGAACGGAATGGAGGAG
GAAATCGCCGTCACCAACGTTCTATCCTCCGCGTTGGTCAACACGAAGAA
AACCGCCCCTGTGACCTCCAGCACCGGAGGCAATAGTAGTAGTGATCCGA
ACGCAGGTACGGGCGACAACACCGGGAGCAGCGGCAGTACCGAATCGAAG
ATCACCACGGGCGACAAGGCGGGTGCCTCCATCCTGACCATTGCCTTTGT
GGGCATGTGGGGAGGTATGATCGCTTGGATGGTCATTGGCGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008496mannan endo-1,6-alpha-mannosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_007903ATCC10864_007903Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007903-T1.exon1ATCC10864_007903-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_007903-T1.exon2ATCC10864_007903-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_007903-T1.exon3ATCC10864_007903-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_007903-T1.exon4ATCC10864_007903-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007903-T1.cdsATCC10864_007903-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_007903-T1ATCC10864_007903-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03663
InterProIPR008928
InterProIPR014480
InterProIPR005198
Properties
Property NameValue
NoteCAZy:GH76
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000188supercontigMCQH01000188:172812..174522 +
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