You are here

Home

ATCC10864_008330-T1, ATCC10864_008330-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008330-T1
Unique NameATCC10864_008330-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:322120..323737+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008330-T1 ID=ATCC10864_008330-T1|Name=ATCC10864_008330-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1618bp|location=Sequence derived from alignment at MCQH01000199:322120..323737+ (Aspergillus niger ATCC 10864)
ATGCTTGGAGTTTCTTCTAAAATAGCAACAATTGCTCAGCCCTGCTTAGT
CATCTACCCTGAACCCGAAAAGGCGCAAGCGGAGAATCCCTTAAAATCGA
TCGACGAGAAGACTGACCAGGGGATTTGCATGGTGACAAGCATTTCTATC
CTGTTCCTGAAGCCGGAGCTGGTCTCCTTATGCCTTTTGGAGATTGACGA
TGAGTTCGTTCCACAACTTGGTGCTACAGGCAAAGAAGGCGCGCTCTGTC
ATCAATTACAGAGGGAGGAAATCAGATGCCAAGAAGAATAATCTGTCCAA
GCACGCTGCAGGTTCATCATCAGTGTCCTCGTCAGTGTATGTTGAATGCC
CCTCGTTGGATTCCGAGTTCTATGCTTAAGGTTTATGGCGTGTTCATCAC
TAACATACCCTCGTTGTACTACTACAGTGTGGAGCTAGTTCCGACTTCTT
CCCCCTGGGATCTCCTCCCAGTCGAGATTCAGATCAAGATATTCGCCCAC
TGCGGTGTCACGGATTTCCTACCATTAAAGCTTGTCTGCAAATCGTTCTA
TCTGCTGCTTAACTCGCAGGAACAATGGATTACCCGGCAATACCTCCGTC
AACGTCGCCATGGAACACTTCCATCCCCAATAGATAGCGAAAGAACATAT
ACTCGGAACCCGGAGGATGATGCAGTGTTGTTATCGGATTTGTTTCCACC
AGCCAAAAGCGCTAAGGGTGGTCACATATACACTTTCAAGTATATTTCCG
GCCTGCGTCGCCGGCAGACGCTTTGTTCAAGGCTTTGCTGCTACCTTGCA
GACCGTGTTATGGATCGGTTTGTACACAGCGAACCGGCGTTTATGAAATC
CATGTTCACCTCCAAAGCTGAGCGCTGTGTCTTCGTGCAAAGGACTACTG
CGCGCTTATGGTTTCATCTCGCTCCGCTCATGTAAGTAGTGGCCTCCCAA
CCTCCCGTTTTAGTGCTCTTCTAACGCATTCCTCTTCATGCAGGTATTAT
ACACTATACTTCCTTGAAACCTATGCTCTTGCCAGGCGAGAGCAGACTAA
CGTTCTTCTGCGTGACTGGGAAGCCGGATGCTTGCCAGTTCCTGTACCCC
CACACATCCGTAAAGCCATGTACCGGGACTTGCAAGTAAAGATAATCAGA
TCACCCCCTTTTACTGACACCCCTACCCTCATAGCCACACATCACTGCAT
GCAACTTCTAGTCTCATACTTGCGGTACACTGTACCACCGGATGAGCCTA
CGGTTTCGGATGACAGTTGGATTGGATCGTTGCTTACAGTATCGCCGTTC
CTCCGAATAGTGGAGTACTTCTCCGCTGAGATCGGGGATGGTGGCAATCA
GCGGATGCAGCGAAAGGACTTCATGCACAATTTTCATAATGATATTACAT
TAAATGAAAAGGACGACATCAACATGTTGGTCTTCCAGAATGCCCCGAAT
GTGCATCTGCATGGTTCCGTGGAAGATGTCTGGTTCGATGTTGTGAAGGA
GGAATTGGCTTTACGAAAGGCGGCGCCGCATCATGCAGAGCGCGTCATGG
TTTGGACAGGATTGCCTGTCCTATTCAGCTGCCAAGACTGTCGCATTCCA
GATGGATGGCGTGCATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000199:322120..323737+

>ATCC10864_008330-T1 ID=ATCC10864_008330-T1|Name=ATCC10864_008330-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5628bp|location=Sequence derived from alignment at MCQH01000199:322120..323737+ (Aspergillus niger ATCC 10864)
ATGCTTGGAGTTTCTTCTAAAATAGCAACAATTGCTCAGCCCTGCTTAGT
CATCTACCCTGAACCCGAAAAGGCGCAAGCGGAGAATCCCTTAAAATCGA
TCGACGAGAAGACTGACCAGGGGATTTGCATGGTGACAAGCATTTCTATC
CTGTTCCTGAAGCCGGAGCTGGTCTCCTTATGCCTTTTGGAGATTGACGA
TGAAGGGAGGAAATCAGATGCCAAGAAGAATAATCTGTCCAAGCACGCTG
CAGGTTCATCATCAGTGTCCTCGTCAGTTGTGGAGCTAGTTCCGACTTCT
TCCCCCTGGGATCTCCTCCCAGTCGAGATTCAGATCAAGATATTCGCCCA
CTGCGGTGTCACGGATTTCCTACCATTAAAGCTTGTCTGCAAATCGTTCT
ATCTGCTGCTTAACTCGCAGGAACAATGGATTACCCGGCAATACCTCCGT
CAACGTCGCCATGGAACACTTCCATCCCCAATAGATAGCGAAAGAACATA
TACTCGGAACCCGGAGGATGATGCAGTGTTGTTATCGGATTTGTTTCCAC
CAGCCAAAAGCGCTAAGGGTGGTCACATATACACTTTCAAGTATATTTCC
GGCCTGCGTCGCCGGCAGACGCTTTGTTCAAGGCTTTGCTGCTACCTTGC
AGACCGTGTTATGGATCGGTTTGTACACAGCGAACCGGCGTTTATGAAAT
CCATGTTCACCTCCAAAGCTGAGCGCTGTGTCTTCGTGCAAAGGACTACT
GCGCGCTTATGGTTTCATCTCGCTCCGCTCATGTATTATACACTATACTT
CCTTGAAACCTATGCTCTTGCCAGGCGAGAGCAGACTAACGTTCTTCTGC
GTGACTGGGAAGCCGGATGCTTGCCAGTTCCTGTACCCCCACACATCCGT
AAAGCCATGTACCGGGACTTGCAAGTAAAGATAATCAGATCACCCCCTTT
TACTGACACCCCTACCCTCATAGCCACACATCACTGCATGCAACTTCTAG
TCTCATACTTGCGGTACACTGTACCACCGGATGAGCCTACGGTTTCGGAT
GACAGTTGGATTGGATCGTTGCTTACAGTATCGCCGTTCCTCCGAATAGT
GGAGTACTTCTCCGCTGAGATCGGGGATGGTGGCAATCAGCGGATGCAGC
GAAAGGACTTCATGCACAATTTTCATAATGATATTACATTAAATGAAAAG
GACGACATCAACATGTTGGTCTTCCAGAATGCCCCGAATGTGCATCTGCA
TGGTTCCGTGGAAGATGTCTGGTTCGATGTTGTGAAGGAGGAATTGGCTT
TACGAAAGGCGGCGCCGCATCATGCAGAGCGCGTCATGGTTTGGACAGGA
TTGCCTGTCCTATTCAGCTGCCAAGACTGTCGCATTCCAGATGGATGGCG
TGCATAAATGCTTGGAGTTTCTTCTAAAATAGCAACAATTGCTCAGCCCT
GCTTAGTCATCTACCCTGAACCCGAAAAGGCGCAAGCGGAGAATCCCTTA
AAATCGATCGACGAGAAGACTGACCAGGGGATTTGCATGGTGACAAGCAT
TTCTATCCTGTTCCTGAAGCCGGAGCTGGTCTCCTTATGCCTTTTGGAGA
TTGACGATGAAGGGAGGAAATCAGATGCCAAGAAGAATAATCTGTCCAAG
CACGCTGCAGGTTCATCATCAGTGTCCTCGTCAGTTGTGGAGCTAGTTCC
GACTTCTTCCCCCTGGGATCTCCTCCCAGTCGAGATTCAGATCAAGATAT
TCGCCCACTGCGGTGTCACGGATTTCCTACCATTAAAGCTTGTCTGCAAA
TCGTTCTATCTGCTGCTTAACTCGCAGGAACAATGGATTACCCGGCAATA
CCTCCGTCAACGTCGCCATGGAACACTTCCATCCCCAATAGATAGCGAAA
GAACATATACTCGGAACCCGGAGGATGATGCAGTGTTGTTATCGGATTTG
TTTCCACCAGCCAAAAGCGCTAAGGGTGGTCACATATACACTTTCAAGTA
TATTTCCGGCCTGCGTCGCCGGCAGACGCTTTGTTCAAGGCTTTGCTGCT
ACCTTGCAGACCGTGTTATGGATCGGTTTGTACACAGCGAACCGGCGTTT
ATGAAATCCATGTTCACCTCCAAAGCTGAGCGCTGTGTCTTCGTGCAAAG
GACTACTGCGCGCTTATGGTTTCATCTCGCTCCGCTCATGTATTATACAC
TATACTTCCTTGAAACCTATGCTCTTGCCAGGCGAGAGCAGACTAACGTT
CTTCTGCGTGACTGGGAAGCCGGATGCTTGCCAGTTCCTGTACCCCCACA
CATCCGTAAAGCCATGTACCGGGACTTGCAAGTAAAGATAATCAGATCAC
CCCCTTTTACTGACACCCCTACCCTCATAGCCACACATCACTGCATGCAA
CTTCTAGTCTCATACTTGCGGTACACTGTACCACCGGATGAGCCTACGGT
TTCGGATGACAGTTGGATTGGATCGTTGCTTACAGTATCGCCGTTCCTCC
GAATAGTGGAGTACTTCTCCGCTGAGATCGGGGATGGTGGCAATCAGCGG
ATGCAGCGAAAGGACTTCATGCACAATTTTCATAATGATATTACATTAAA
TGAAAAGGACGACATCAACATGTTGGTCTTCCAGAATGCCCCGAATGTGC
ATCTGCATGGTTCCGTGGAAGATGTCTGGTTCGATGTTGTGAAGGAGGAA
TTGGCTTTACGAAAGGCGGCGCCGCATCATGCAGAGCGCGTCATGGTTTG
GACAGGATTGCCTGTCCTATTCAGCTGCCAAGACTGTCGCATTCCAGATG
GATGGCGTGCATAAATGCTTGGAGTTTCTTCTAAAATAGCAACAATTGCT
CAGCCCTGCTTAGTCATCTACCCTGAACCCGAAAAGGCGCAAGCGGAGAA
TCCCTTAAAATCGATCGACGAGAAGACTGACCAGGGGATTTGCATGGTGA
CAAGCATTTCTATCCTGTTCCTGAAGCCGGAGCTGGTCTCCTTATGCCTT
TTGGAGATTGACGATGAAGGGAGGAAATCAGATGCCAAGAAGAATAATCT
GTCCAAGCACGCTGCAGGTTCATCATCAGTGTCCTCGTCAGTTGTGGAGC
TAGTTCCGACTTCTTCCCCCTGGGATCTCCTCCCAGTCGAGATTCAGATC
AAGATATTCGCCCACTGCGGTGTCACGGATTTCCTACCATTAAAGCTTGT
CTGCAAATCGTTCTATCTGCTGCTTAACTCGCAGGAACAATGGATTACCC
GGCAATACCTCCGTCAACGTCGCCATGGAACACTTCCATCCCCAATAGAT
AGCGAAAGAACATATACTCGGAACCCGGAGGATGATGCAGTGTTGTTATC
GGATTTGTTTCCACCAGCCAAAAGCGCTAAGGGTGGTCACATATACACTT
TCAAGTATATTTCCGGCCTGCGTCGCCGGCAGACGCTTTGTTCAAGGCTT
TGCTGCTACCTTGCAGACCGTGTTATGGATCGGTTTGTACACAGCGAACC
GGCGTTTATGAAATCCATGTTCACCTCCAAAGCTGAGCGCTGTGTCTTCG
TGCAAAGGACTACTGCGCGCTTATGGTTTCATCTCGCTCCGCTCATGTAT
TATACACTATACTTCCTTGAAACCTATGCTCTTGCCAGGCGAGAGCAGAC
TAACGTTCTTCTGCGTGACTGGGAAGCCGGATGCTTGCCAGTTCCTGTAC
CCCCACACATCCGTAAAGCCATGTACCGGGACTTGCAAGTAAAGATAATC
AGATCACCCCCTTTTACTGACACCCCTACCCTCATAGCCACACATCACTG
CATGCAACTTCTAGTCTCATACTTGCGGTACACTGTACCACCGGATGAGC
CTACGGTTTCGGATGACAGTTGGATTGGATCGTTGCTTACAGTATCGCCG
TTCCTCCGAATAGTGGAGTACTTCTCCGCTGAGATCGGGGATGGTGGCAA
TCAGCGGATGCAGCGAAAGGACTTCATGCACAATTTTCATAATGATATTA
CATTAAATGAAAAGGACGACATCAACATGTTGGTCTTCCAGAATGCCCCG
AATGTGCATCTGCATGGTTCCGTGGAAGATGTCTGGTTCGATGTTGTGAA
GGAGGAATTGGCTTTACGAAAGGCGGCGCCGCATCATGCAGAGCGCGTCA
TGGTTTGGACAGGATTGCCTGTCCTATTCAGCTGCCAAGACTGTCGCATT
CCAGATGGATGGCGTGCATAAATGCTTGGAGTTTCTTCTAAAATAGCAAC
AATTGCTCAGCCCTGCTTAGTCATCTACCCTGAACCCGAAAAGGCGCAAG
CGGAGAATCCCTTAAAATCGATCGACGAGAAGACTGACCAGGGGATTTGC
ATGGTGACAAGCATTTCTATCCTGTTCCTGAAGCCGGAGCTGGTCTCCTT
ATGCCTTTTGGAGATTGACGATGAAGGGAGGAAATCAGATGCCAAGAAGA
ATAATCTGTCCAAGCACGCTGCAGGTTCATCATCAGTGTCCTCGTCAGTT
GTGGAGCTAGTTCCGACTTCTTCCCCCTGGGATCTCCTCCCAGTCGAGAT
TCAGATCAAGATATTCGCCCACTGCGGTGTCACGGATTTCCTACCATTAA
AGCTTGTCTGCAAATCGTTCTATCTGCTGCTTAACTCGCAGGAACAATGG
ATTACCCGGCAATACCTCCGTCAACGTCGCCATGGAACACTTCCATCCCC
AATAGATAGCGAAAGAACATATACTCGGAACCCGGAGGATGATGCAGTGT
TGTTATCGGATTTGTTTCCACCAGCCAAAAGCGCTAAGGGTGGTCACATA
TACACTTTCAAGTATATTTCCGGCCTGCGTCGCCGGCAGACGCTTTGTTC
AAGGCTTTGCTGCTACCTTGCAGACCGTGTTATGGATCGGTTTGTACACA
GCGAACCGGCGTTTATGAAATCCATGTTCACCTCCAAAGCTGAGCGCTGT
GTCTTCGTGCAAAGGACTACTGCGCGCTTATGGTTTCATCTCGCTCCGCT
CATGTATTATACACTATACTTCCTTGAAACCTATGCTCTTGCCAGGCGAG
AGCAGACTAACGTTCTTCTGCGTGACTGGGAAGCCGGATGCTTGCCAGTT
CCTGTACCCCCACACATCCGTAAAGCCATGTACCGGGACTTGCAAGTAAA
GATAATCAGATCACCCCCTTTTACTGACACCCCTACCCTCATAGCCACAC
ATCACTGCATGCAACTTCTAGTCTCATACTTGCGGTACACTGTACCACCG
GATGAGCCTACGGTTTCGGATGACAGTTGGATTGGATCGTTGCTTACAGT
ATCGCCGTTCCTCCGAATAGTGGAGTACTTCTCCGCTGAGATCGGGGATG
GTGGCAATCAGCGGATGCAGCGAAAGGACTTCATGCACAATTTTCATAAT
GATATTACATTAAATGAAAAGGACGACATCAACATGTTGGTCTTCCAGAA
TGCCCCGAATGTGCATCTGCATGGTTCCGTGGAAGATGTCTGGTTCGATG
TTGTGAAGGAGGAATTGGCTTTACGAAAGGCGGCGCCGCATCATGCAGAG
CGCGTCATGGTTTGGACAGGATTGCCTGTCCTATTCAGCTGCCAAGACTG
TCGCATTCCAGATGGATGGCGTGCATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008330ATCC10864_008330Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008330-T1.exon1ATCC10864_008330-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_008330-T1.exon2ATCC10864_008330-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008330-T1.exon3ATCC10864_008330-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008330-T1.exon4ATCC10864_008330-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008330-T1.cdsATCC10864_008330-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008330-T1ATCC10864_008330-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036047
InterProIPR001810
PFAMPF00646
Properties
Property NameValue
NoteantiSMASH:Cluster_1000199.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:322120..323737 +
Powered by Drupal