You are here

Home

ATCC10864_008546-T1, ATCC10864_008546-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_008546-T1
Unique NameATCC10864_008546-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000199:987548..988859-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_008546-T1 ID=ATCC10864_008546-T1|Name=ATCC10864_008546-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1312bp|location=Sequence derived from alignment at MCQH01000199:987548..988859- (Aspergillus niger ATCC 10864)
ATGTCTGAACAAGTTGTTTATCCACCACCTCCAAGCCAAGCGCCTACTTT
TCCTCGTGGGTAACCCTTTCATGCATTATTGCCGCTCAATACTAAACAGC
TCATTATATAGCTCCACCAAATGGCGCCGGTATGGTACCACAGATAAATT
GATATCTTGCGTCTAGCTGATAATCTCTAGCATATCAACCTCCATCCCAG
ACCCCTCCGAACATTCCTCCTCCAAACTTCAGCTTTCCTCCGCCTCCACA
GCAGCCTATATCTTCACACGAGGACAAGGCTGATGTTTCACCAATCTCTT
CTCCACAAGGCCCGCCAACCCCGCCGATAAATGAGAAGGCTGTTTATGCA
GCTGAGAATGCTGGATCATTTTCTGCCAACTCGGCTATGTTTAGTTCATC
GGAAGCCCAGCAAGCACCAACACCAGGGCCAGGTCTCACACGAGCGCATA
CAGATGCGACTCTTGCCAGCCGAATTGCCCCAAAACACTTCGTAGGAGCC
ACATCAACATATGCGGACGATGTAGGGACTTTCAACGGTGGCAGCTATAG
GGTCAGTCATCGAGACACAAACACTCTCTTAACCATTCAGCTGGCGGTGG
GGTGTCCCATCCAAGCGAGACCCGGTATGTCGCGTAGCCTTATTATACAC
TGCATGAGACTAAGTTTTGCATACGACAGGAATCATGATCGCGATGTCTC
CTTCTATGTCCCTCAGAGGTTCGCTCTCTTTTGGATGGATGAAAGCCCTT
GCAGGAGGCCAATTGGCCCGTTCAACATACACCGGCCCTGGTGAACTCCT
ACTCGCCCCATCTATTCTTGGAGATGTCACTATCATCCGTCTGGACGGCC
ATACAGAGTGGACCGTAGGGAAGGACGCCTTTCTTGCTTGTACAGTGGGC
GTTAACATCAACTTCAAAACTCAAGGTCTTATGAAGGGTGTGTTCTCCGG
CGAAGGTTTCATCGTGTTCAAATTCACCGGCTCCGGGTTGGTATGGATGC
AGAGCTTCGGAGCGATTGTCAAGAAAGAAGTATGTTATTCTACCTCCCTT
AGCTCTGAAAATCGAGTGATGAGCCAAACTAATGTGATTGTAGCTCGCCG
ATGATGAAACGTACTACGTAAATAACGGCCATCTGGTAGCATGGAATTGC
CGCTACAAGATTGAACGAGTTGCTTCGGGTGGTATTATCTCTAACTGGAG
TGCAGGCGAGGGTCTTGCCTGTAGATTCACAGGCCCTGGCACTGTGTATA
TGCAGACACGCAATGTGTCCTCCTTCGTTGCCCATTTGGGCAACAGCATT
GCTAAAAGCTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000199:987548..988859-

>ATCC10864_008546-T1 ID=ATCC10864_008546-T1|Name=ATCC10864_008546-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5430bp|location=Sequence derived from alignment at MCQH01000199:987548..988859- (Aspergillus niger ATCC 10864)
CTCGCCGATGATGAAACGTACTACGTAAATAACGGCCATCTGGTAGCATG
GAATTGCCGCTACAAGATTGAACGAGTTGCTTCGGGTGGTATTATCTCTA
ACTGGAGTGCAGGCGAGGGTCTTGCCTGTAGATTCACAGGCCCTGGCACT
GTGTATATGCAGACACGCAATGTGTCCTCCTTCGTTGCCCATTTGGGCAA
CAGCATTGCTAAAAGCTAAGAATCATGATCGCGATGTCTCCTTCTATGTC
CCTCAGAGGTTCGCTCTCTTTTGGATGGATGAAAGCCCTTGCAGGAGGCC
AATTGGCCCGTTCAACATACACCGGCCCTGGTGAACTCCTACTCGCCCCA
TCTATTCTTGGAGATGTCACTATCATCCGTCTGGACGGCCATACAGAGTG
GACCGTAGGGAAGGACGCCTTTCTTGCTTGTACAGTGGGCGTTAACATCA
ACTTCAAAACTCAAGGTCTTATGAAGGGTGTGTTCTCCGGCGAAGGTTTC
ATCGTGTTCAAATTCACCGGCTCCGGGTTGGTATGGATGCAGAGCTTCGG
AGCGATTGTCAAGAAAGAACATATCAACCTCCATCCCAGACCCCTCCGAA
CATTCCTCCTCCAAACTTCAGCTTTCCTCCGCCTCCACAGCAGCCTATAT
CTTCACACGAGGACAAGGCTGATGTTTCACCAATCTCTTCTCCACAAGGC
CCGCCAACCCCGCCGATAAATGAGAAGGCTGTTTATGCAGCTGAGAATGC
TGGATCATTTTCTGCCAACTCGGCTATGTTTAGTTCATCGGAAGCCCAGC
AAGCACCAACACCAGGGCCAGGTCTCACACGAGCGCATACAGATGCGACT
CTTGCCAGCCGAATTGCCCCAAAACACTTCGTAGGAGCCACATCAACATA
TGCGGACGATGTAGGGACTTTCAACGGTGGCAGCTATAGGGTCAGTCATC
GAGACACAAACACTCTCTTAACCATTCAGCTGGCGGTGGGGTGTCCCATC
CAAGCGAGACCCGCTCCACCAAATGGCGCCGATGTCTGAACAAGTTGTTT
ATCCACCACCTCCAAGCCAAGCGCCTACTTTTCCTCCTCGCCGATGATGA
AACGTACTACGTAAATAACGGCCATCTGGTAGCATGGAATTGCCGCTACA
AGATTGAACGAGTTGCTTCGGGTGGTATTATCTCTAACTGGAGTGCAGGC
GAGGGTCTTGCCTGTAGATTCACAGGCCCTGGCACTGTGTATATGCAGAC
ACGCAATGTGTCCTCCTTCGTTGCCCATTTGGGCAACAGCATTGCTAAAA
GCTAAGAATCATGATCGCGATGTCTCCTTCTATGTCCCTCAGAGGTTCGC
TCTCTTTTGGATGGATGAAAGCCCTTGCAGGAGGCCAATTGGCCCGTTCA
ACATACACCGGCCCTGGTGAACTCCTACTCGCCCCATCTATTCTTGGAGA
TGTCACTATCATCCGTCTGGACGGCCATACAGAGTGGACCGTAGGGAAGG
ACGCCTTTCTTGCTTGTACAGTGGGCGTTAACATCAACTTCAAAACTCAA
GGTCTTATGAAGGGTGTGTTCTCCGGCGAAGGTTTCATCGTGTTCAAATT
CACCGGCTCCGGGTTGGTATGGATGCAGAGCTTCGGAGCGATTGTCAAGA
AAGAACATATCAACCTCCATCCCAGACCCCTCCGAACATTCCTCCTCCAA
ACTTCAGCTTTCCTCCGCCTCCACAGCAGCCTATATCTTCACACGAGGAC
AAGGCTGATGTTTCACCAATCTCTTCTCCACAAGGCCCGCCAACCCCGCC
GATAAATGAGAAGGCTGTTTATGCAGCTGAGAATGCTGGATCATTTTCTG
CCAACTCGGCTATGTTTAGTTCATCGGAAGCCCAGCAAGCACCAACACCA
GGGCCAGGTCTCACACGAGCGCATACAGATGCGACTCTTGCCAGCCGAAT
TGCCCCAAAACACTTCGTAGGAGCCACATCAACATATGCGGACGATGTAG
GGACTTTCAACGGTGGCAGCTATAGGGTCAGTCATCGAGACACAAACACT
CTCTTAACCATTCAGCTGGCGGTGGGGTGTCCCATCCAAGCGAGACCCGC
TCCACCAAATGGCGCCGATGTCTGAACAAGTTGTTTATCCACCACCTCCA
AGCCAAGCGCCTACTTTTCCTCCTCGCCGATGATGAAACGTACTACGTAA
ATAACGGCCATCTGGTAGCATGGAATTGCCGCTACAAGATTGAACGAGTT
GCTTCGGGTGGTATTATCTCTAACTGGAGTGCAGGCGAGGGTCTTGCCTG
TAGATTCACAGGCCCTGGCACTGTGTATATGCAGACACGCAATGTGTCCT
CCTTCGTTGCCCATTTGGGCAACAGCATTGCTAAAAGCTAAGAATCATGA
TCGCGATGTCTCCTTCTATGTCCCTCAGAGGTTCGCTCTCTTTTGGATGG
ATGAAAGCCCTTGCAGGAGGCCAATTGGCCCGTTCAACATACACCGGCCC
TGGTGAACTCCTACTCGCCCCATCTATTCTTGGAGATGTCACTATCATCC
GTCTGGACGGCCATACAGAGTGGACCGTAGGGAAGGACGCCTTTCTTGCT
TGTACAGTGGGCGTTAACATCAACTTCAAAACTCAAGGTCTTATGAAGGG
TGTGTTCTCCGGCGAAGGTTTCATCGTGTTCAAATTCACCGGCTCCGGGT
TGGTATGGATGCAGAGCTTCGGAGCGATTGTCAAGAAAGAACATATCAAC
CTCCATCCCAGACCCCTCCGAACATTCCTCCTCCAAACTTCAGCTTTCCT
CCGCCTCCACAGCAGCCTATATCTTCACACGAGGACAAGGCTGATGTTTC
ACCAATCTCTTCTCCACAAGGCCCGCCAACCCCGCCGATAAATGAGAAGG
CTGTTTATGCAGCTGAGAATGCTGGATCATTTTCTGCCAACTCGGCTATG
TTTAGTTCATCGGAAGCCCAGCAAGCACCAACACCAGGGCCAGGTCTCAC
ACGAGCGCATACAGATGCGACTCTTGCCAGCCGAATTGCCCCAAAACACT
TCGTAGGAGCCACATCAACATATGCGGACGATGTAGGGACTTTCAACGGT
GGCAGCTATAGGGTCAGTCATCGAGACACAAACACTCTCTTAACCATTCA
GCTGGCGGTGGGGTGTCCCATCCAAGCGAGACCCGCTCCACCAAATGGCG
CCGATGTCTGAACAAGTTGTTTATCCACCACCTCCAAGCCAAGCGCCTAC
TTTTCCTCCTCGCCGATGATGAAACGTACTACGTAAATAACGGCCATCTG
GTAGCATGGAATTGCCGCTACAAGATTGAACGAGTTGCTTCGGGTGGTAT
TATCTCTAACTGGAGTGCAGGCGAGGGTCTTGCCTGTAGATTCACAGGCC
CTGGCACTGTGTATATGCAGACACGCAATGTGTCCTCCTTCGTTGCCCAT
TTGGGCAACAGCATTGCTAAAAGCTAAGAATCATGATCGCGATGTCTCCT
TCTATGTCCCTCAGAGGTTCGCTCTCTTTTGGATGGATGAAAGCCCTTGC
AGGAGGCCAATTGGCCCGTTCAACATACACCGGCCCTGGTGAACTCCTAC
TCGCCCCATCTATTCTTGGAGATGTCACTATCATCCGTCTGGACGGCCAT
ACAGAGTGGACCGTAGGGAAGGACGCCTTTCTTGCTTGTACAGTGGGCGT
TAACATCAACTTCAAAACTCAAGGTCTTATGAAGGGTGTGTTCTCCGGCG
AAGGTTTCATCGTGTTCAAATTCACCGGCTCCGGGTTGGTATGGATGCAG
AGCTTCGGAGCGATTGTCAAGAAAGAACATATCAACCTCCATCCCAGACC
CCTCCGAACATTCCTCCTCCAAACTTCAGCTTTCCTCCGCCTCCACAGCA
GCCTATATCTTCACACGAGGACAAGGCTGATGTTTCACCAATCTCTTCTC
CACAAGGCCCGCCAACCCCGCCGATAAATGAGAAGGCTGTTTATGCAGCT
GAGAATGCTGGATCATTTTCTGCCAACTCGGCTATGTTTAGTTCATCGGA
AGCCCAGCAAGCACCAACACCAGGGCCAGGTCTCACACGAGCGCATACAG
ATGCGACTCTTGCCAGCCGAATTGCCCCAAAACACTTCGTAGGAGCCACA
TCAACATATGCGGACGATGTAGGGACTTTCAACGGTGGCAGCTATAGGGT
CAGTCATCGAGACACAAACACTCTCTTAACCATTCAGCTGGCGGTGGGGT
GTCCCATCCAAGCGAGACCCGCTCCACCAAATGGCGCCGATGTCTGAACA
AGTTGTTTATCCACCACCTCCAAGCCAAGCGCCTACTTTTCCTCCTCGCC
GATGATGAAACGTACTACGTAAATAACGGCCATCTGGTAGCATGGAATTG
CCGCTACAAGATTGAACGAGTTGCTTCGGGTGGTATTATCTCTAACTGGA
GTGCAGGCGAGGGTCTTGCCTGTAGATTCACAGGCCCTGGCACTGTGTAT
ATGCAGACACGCAATGTGTCCTCCTTCGTTGCCCATTTGGGCAACAGCAT
TGCTAAAAGCTAAGAATCATGATCGCGATGTCTCCTTCTATGTCCCTCAG
AGGTTCGCTCTCTTTTGGATGGATGAAAGCCCTTGCAGGAGGCCAATTGG
CCCGTTCAACATACACCGGCCCTGGTGAACTCCTACTCGCCCCATCTATT
CTTGGAGATGTCACTATCATCCGTCTGGACGGCCATACAGAGTGGACCGT
AGGGAAGGACGCCTTTCTTGCTTGTACAGTGGGCGTTAACATCAACTTCA
AAACTCAAGGTCTTATGAAGGGTGTGTTCTCCGGCGAAGGTTTCATCGTG
TTCAAATTCACCGGCTCCGGGTTGGTATGGATGCAGAGCTTCGGAGCGAT
TGTCAAGAAAGAACATATCAACCTCCATCCCAGACCCCTCCGAACATTCC
TCCTCCAAACTTCAGCTTTCCTCCGCCTCCACAGCAGCCTATATCTTCAC
ACGAGGACAAGGCTGATGTTTCACCAATCTCTTCTCCACAAGGCCCGCCA
ACCCCGCCGATAAATGAGAAGGCTGTTTATGCAGCTGAGAATGCTGGATC
ATTTTCTGCCAACTCGGCTATGTTTAGTTCATCGGAAGCCCAGCAAGCAC
CAACACCAGGGCCAGGTCTCACACGAGCGCATACAGATGCGACTCTTGCC
AGCCGAATTGCCCCAAAACACTTCGTAGGAGCCACATCAACATATGCGGA
CGATGTAGGGACTTTCAACGGTGGCAGCTATAGGGTCAGTCATCGAGACA
CAAACACTCTCTTAACCATTCAGCTGGCGGTGGGGTGTCCCATCCAAGCG
AGACCCGCTCCACCAAATGGCGCCGATGTCTGAACAAGTTGTTTATCCAC
CACCTCCAAGCCAAGCGCCTACTTTTCCTC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_008546ATCC10864_008546Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008546-T1ATCC10864_008546-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008546-T1.cdsATCC10864_008546-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_008546-T1.exon5ATCC10864_008546-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_008546-T1.exon4ATCC10864_008546-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_008546-T1.exon3ATCC10864_008546-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_008546-T1.exon2ATCC10864_008546-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_008546-T1.exon1ATCC10864_008546-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR002838
InterProIPR016031
PFAMPF01987
InterProIPR036983
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000199supercontigMCQH01000199:987548..988859 -
Powered by Drupal