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ATCC10864_009169-T1, ATCC10864_009169-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009169-T1
Unique NameATCC10864_009169-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:390326..391205+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009169-T1 ID=ATCC10864_009169-T1|Name=ATCC10864_009169-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=880bp|location=Sequence derived from alignment at MCQH01000208:390326..391205+ (Aspergillus niger ATCC 10864)
ATGGCGTCTTCTTCCCCGATCCTGCAGCAGCTGGGCTGCTTCCGGTCCCT
CCTCCTGAAGCCTCAGTCCCTGTCGTCCACCGTCAACAACCAGATCGGTC
GCCGTGCGCTCAGCACCGTCTACTCCGCGAAGCCTGAGCCCAAGCCTCTC
CCTAAGAACCTGCCGGAGCAGTTCCTTCGTCAATTACCGCTTCGCATGCG
GCCGAATCCTGGTATGGACTGAACTAACTCATTTTTTGCTTGGACTTGCG
TCCGTCTCGAGTTACCGATGCTTGCTTTACCCGGATCATATATCTAACAT
GTTTAATGAATGATATGTAGAGCGCAAAGAACGCAAGATCCCTCCTCCGC
CGCCGGCCCCTCAGTGCAAGGACCCCGTGAACGCCGTGCAAGAGGCCCAA
TTGGCGCAGCTGGACCCCACGGGCGAGCGCCGCGCTCTTTTCGACTACAG
ACGGAGTCCTCGCAGTGTCAAGGTCGGAGATGTTTTGCGGGTGACGTTCA
AGAACGGAGATCCGTTCTCCGGAGTGTGTTTGAGCATTCGGTTGCGCGGC
ATTGATACGTCGTTCTTGTTGCGGAACCAGTTGACGAGAGTTGGAGTCGA
GATGTCCATCAAGGTGTTCAGTCCTAATGTTGAAAGTGTGGAGATTGTGC
AGAGGGCGGAGAAGAGAAAGAGACGCGCGAGGTTGTATTACATGAGGTGC
GTATTAATTTCTTTGTGGATAGTGGATTGTATTGGATGGGAAGGCTAACG
AGATCTCCTTCGGGTTTATAGGAAGCCCAAGCACGACATGGGCAGCGTCG
AGAACCTCGTTGCGAACTACCTCCGGCAGAAGAGATCGCTTACCGGCAAG
AGGGGCGGTGGCCAGACGAAGAGACGGTAG
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Coding sequence (CDS) from alignment at MCQH01000208:390326..391205+

>ATCC10864_009169-T1 ID=ATCC10864_009169-T1|Name=ATCC10864_009169-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2088bp|location=Sequence derived from alignment at MCQH01000208:390326..391205+ (Aspergillus niger ATCC 10864)
ATGGCGTCTTCTTCCCCGATCCTGCAGCAGCTGGGCTGCTTCCGGTCCCT
CCTCCTGAAGCCTCAGTCCCTGTCGTCCACCGTCAACAACCAGATCGGTC
GCCGTGCGCTCAGCACCGTCTACTCCGCGAAGCCTGAGCCCAAGCCTCTC
CCTAAGAACCTGCCGGAGCAGTTCCTTCGTCAATTACCGCTTCGCATGCG
GCCGAATCCTGAGCGCAAAGAACGCAAGATCCCTCCTCCGCCGCCGGCCC
CTCAGTGCAAGGACCCCGTGAACGCCGTGCAAGAGGCCCAATTGGCGCAG
CTGGACCCCACGGGCGAGCGCCGCGCTCTTTTCGACTACAGACGGAGTCC
TCGCAGTGTCAAGGTCGGAGATGTTTTGCGGGTGACGTTCAAGAACGGAG
ATCCGTTCTCCGGAGTGTGTTTGAGCATTCGGTTGCGCGGCATTGATACG
TCGTTCTTGTTGCGGAACCAGTTGACGAGAGTTGGAGTCGAGATGTCCAT
CAAGGTGTTCAGTCCTAATGTTGAAAGTGTGGAGATTGTGCAGAGGGCGG
AGAAGAGAAAGAGACGCGCGAGGTTGTATTACATGAGGAAGCCCAAGCAC
GACATGGGCAGCGTCGAGAACCTCGTTGCGAACTACCTCCGGCAGAAGAG
ATCGCTTACCGGCAAGAGGGGCGGTGGCCAGACGAAGAGACGGTAGATGG
CGTCTTCTTCCCCGATCCTGCAGCAGCTGGGCTGCTTCCGGTCCCTCCTC
CTGAAGCCTCAGTCCCTGTCGTCCACCGTCAACAACCAGATCGGTCGCCG
TGCGCTCAGCACCGTCTACTCCGCGAAGCCTGAGCCCAAGCCTCTCCCTA
AGAACCTGCCGGAGCAGTTCCTTCGTCAATTACCGCTTCGCATGCGGCCG
AATCCTGAGCGCAAAGAACGCAAGATCCCTCCTCCGCCGCCGGCCCCTCA
GTGCAAGGACCCCGTGAACGCCGTGCAAGAGGCCCAATTGGCGCAGCTGG
ACCCCACGGGCGAGCGCCGCGCTCTTTTCGACTACAGACGGAGTCCTCGC
AGTGTCAAGGTCGGAGATGTTTTGCGGGTGACGTTCAAGAACGGAGATCC
GTTCTCCGGAGTGTGTTTGAGCATTCGGTTGCGCGGCATTGATACGTCGT
TCTTGTTGCGGAACCAGTTGACGAGAGTTGGAGTCGAGATGTCCATCAAG
GTGTTCAGTCCTAATGTTGAAAGTGTGGAGATTGTGCAGAGGGCGGAGAA
GAGAAAGAGACGCGCGAGGTTGTATTACATGAGGAAGCCCAAGCACGACA
TGGGCAGCGTCGAGAACCTCGTTGCGAACTACCTCCGGCAGAAGAGATCG
CTTACCGGCAAGAGGGGCGGTGGCCAGACGAAGAGACGGTAGATGGCGTC
TTCTTCCCCGATCCTGCAGCAGCTGGGCTGCTTCCGGTCCCTCCTCCTGA
AGCCTCAGTCCCTGTCGTCCACCGTCAACAACCAGATCGGTCGCCGTGCG
CTCAGCACCGTCTACTCCGCGAAGCCTGAGCCCAAGCCTCTCCCTAAGAA
CCTGCCGGAGCAGTTCCTTCGTCAATTACCGCTTCGCATGCGGCCGAATC
CTGAGCGCAAAGAACGCAAGATCCCTCCTCCGCCGCCGGCCCCTCAGTGC
AAGGACCCCGTGAACGCCGTGCAAGAGGCCCAATTGGCGCAGCTGGACCC
CACGGGCGAGCGCCGCGCTCTTTTCGACTACAGACGGAGTCCTCGCAGTG
TCAAGGTCGGAGATGTTTTGCGGGTGACGTTCAAGAACGGAGATCCGTTC
TCCGGAGTGTGTTTGAGCATTCGGTTGCGCGGCATTGATACGTCGTTCTT
GTTGCGGAACCAGTTGACGAGAGTTGGAGTCGAGATGTCCATCAAGGTGT
TCAGTCCTAATGTTGAAAGTGTGGAGATTGTGCAGAGGGCGGAGAAGAGA
AAGAGACGCGCGAGGTTGTATTACATGAGGAAGCCCAAGCACGACATGGG
CAGCGTCGAGAACCTCGTTGCGAACTACCTCCGGCAGAAGAGATCGCTTA
CCGGCAAGAGGGGCGGTGGCCAGACGAAGAGACGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009169ATCC10864_009169Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009169-T1.exon1ATCC10864_009169-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009169-T1.exon2ATCC10864_009169-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009169-T1.exon3ATCC10864_009169-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009169-T1.cdsATCC10864_009169-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009169-T1ATCC10864_009169-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR038657
PFAMPF01245
InterProIPR001857
InterProIPR008991
Properties
Property NameValue
NoteBUSCO:EOG09264I6B
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:390326..391205 +
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