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ATCC10864_009176-T1, ATCC10864_009176-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009176-T1
Unique NameATCC10864_009176-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000208:413703..414704-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009176-T1 ID=ATCC10864_009176-T1|Name=ATCC10864_009176-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1002bp|location=Sequence derived from alignment at MCQH01000208:413703..414704- (Aspergillus niger ATCC 10864)
ATGGCTGCCAACCCTGTGGAAAATGGACTATTTGTCCATAACAACACTAC
CGCTCCAGCCCACCCCGGCTTGCTGAGCATGTTCTCACTGAAGGGCAAGA
CTGCCATCGTTACCGGCGCCGGTGCTGGCATCGGCCTTTCCGTAGCTATT
GGCCTGGCTGAAGCTGGTGCAAATGTGGCCTTGTGGTATAGCAGCAACCC
CAACTGCATCGAGCGGGCCGCGGAAATTGCCTCCAAGTATGGTGTCCAGG
GTCAGTAGCCCTCAAACCATTTTCCCCACTTACCGTCAGACATACTTTAC
TAACGCTCAATCTAGCCCAGGCGTACAAGGTCGAAATCACCAAGCCCGAA
GCCGTGCAGGCGGCCGTTGACCAGGTTGTGAAAGACTTCAATGGCCGACT
AGACGTTTTCATCGCCAATGCCGGTATCCCCTGGACTAAAGGTCCCATGG
TTGACGGTCCACTGGACCACTACTCGAGTGTTGTCGACGTCGACCTGAAC
GGAACTTTCTACTGCGCCAGGGCAGCGGCAACCCACTGGAGGAGACAAAA
GGAGGAGGGCACCGATATCAATGGTAACGCGCTCAACAACTTCACCTATG
GCAGCTTTGTGGCCACCGCTTCCATGAGCGGTCACATTGTCAACTTCCCT
CAGATGCAGGCAGCATACAACGCCTCCAAAGCGGGTGTCATCCATCTTTG
TAAGTGGAATAACCTTGTAGGCATAGACTTGCACTGTACTAATCCCCTAT
GCAGGCAAGTCGCTGGCTGTCGAGTGGGTTAAGTTTGCGCGTGCCAACAC
CGTTTCTCCCGGATACATTGCGACAGAGATCTCGAATTTCATCCCAGATG
ATGTCAAGGGCATCTGGAAGGACAAGATTCCCATGGGTCGCGAGGGAGAA
CCCGAGGAGCTGAAGGGCGCGTATCTGTACCTGGCATCGGATGCATCCAG
CTACACCACTGGAGCAGACATTGTGGTTGACGGCGGCTACTGCGCCCCGT
AG
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Coding sequence (CDS) from alignment at MCQH01000208:413703..414704-

>ATCC10864_009176-T1 ID=ATCC10864_009176-T1|Name=ATCC10864_009176-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2646bp|location=Sequence derived from alignment at MCQH01000208:413703..414704- (Aspergillus niger ATCC 10864)
GCAAGTCGCTGGCTGTCGAGTGGGTTAAGTTTGCGCGTGCCAACACCGTT
TCTCCCGGATACATTGCGACAGAGATCTCGAATTTCATCCCAGATGATGT
CAAGGGCATCTGGAAGGACAAGATTCCCATGGGTCGCGAGGGAGAACCCG
AGGAGCTGAAGGGCGCGTATCTGTACCTGGCATCGGATGCATCCAGCTAC
ACCACTGGAGCAGACATTGTGGTTGACGGCGGCTACTGCGCCCCGTAGCC
CAGGCGTACAAGGTCGAAATCACCAAGCCCGAAGCCGTGCAGGCGGCCGT
TGACCAGGTTGTGAAAGACTTCAATGGCCGACTAGACGTTTTCATCGCCA
ATGCCGGTATCCCCTGGACTAAAGGTCCCATGGTTGACGGTCCACTGGAC
CACTACTCGAGTGTTGTCGACGTCGACCTGAACGGAACTTTCTACTGCGC
CAGGGCAGCGGCAACCCACTGGAGGAGACAAAAGGAGGAGGGCACCGATA
TCAATGGTAACGCGCTCAACAACTTCACCTATGGCAGCTTTGTGGCCACC
GCTTCCATGAGCGGTCACATTGTCAACTTCCCTCAGATGCAGGCAGCATA
CAACGCCTCCAAAGCGGGTGTCATCCATCTTTATGGCTGCCAACCCTGTG
GAAAATGGACTATTTGTCCATAACAACACTACCGCTCCAGCCCACCCCGG
CTTGCTGAGCATGTTCTCACTGAAGGGCAAGACTGCCATCGTTACCGGCG
CCGGTGCTGGCATCGGCCTTTCCGTAGCTATTGGCCTGGCTGAAGCTGGT
GCAAATGTGGCCTTGTGGTATAGCAGCAACCCCAACTGCATCGAGCGGGC
CGCGGAAATTGCCTCCAAGTATGGTGTCCAGGGCAAGTCGCTGGCTGTCG
AGTGGGTTAAGTTTGCGCGTGCCAACACCGTTTCTCCCGGATACATTGCG
ACAGAGATCTCGAATTTCATCCCAGATGATGTCAAGGGCATCTGGAAGGA
CAAGATTCCCATGGGTCGCGAGGGAGAACCCGAGGAGCTGAAGGGCGCGT
ATCTGTACCTGGCATCGGATGCATCCAGCTACACCACTGGAGCAGACATT
GTGGTTGACGGCGGCTACTGCGCCCCGTAGCCCAGGCGTACAAGGTCGAA
ATCACCAAGCCCGAAGCCGTGCAGGCGGCCGTTGACCAGGTTGTGAAAGA
CTTCAATGGCCGACTAGACGTTTTCATCGCCAATGCCGGTATCCCCTGGA
CTAAAGGTCCCATGGTTGACGGTCCACTGGACCACTACTCGAGTGTTGTC
GACGTCGACCTGAACGGAACTTTCTACTGCGCCAGGGCAGCGGCAACCCA
CTGGAGGAGACAAAAGGAGGAGGGCACCGATATCAATGGTAACGCGCTCA
ACAACTTCACCTATGGCAGCTTTGTGGCCACCGCTTCCATGAGCGGTCAC
ATTGTCAACTTCCCTCAGATGCAGGCAGCATACAACGCCTCCAAAGCGGG
TGTCATCCATCTTTATGGCTGCCAACCCTGTGGAAAATGGACTATTTGTC
CATAACAACACTACCGCTCCAGCCCACCCCGGCTTGCTGAGCATGTTCTC
ACTGAAGGGCAAGACTGCCATCGTTACCGGCGCCGGTGCTGGCATCGGCC
TTTCCGTAGCTATTGGCCTGGCTGAAGCTGGTGCAAATGTGGCCTTGTGG
TATAGCAGCAACCCCAACTGCATCGAGCGGGCCGCGGAAATTGCCTCCAA
GTATGGTGTCCAGGGCAAGTCGCTGGCTGTCGAGTGGGTTAAGTTTGCGC
GTGCCAACACCGTTTCTCCCGGATACATTGCGACAGAGATCTCGAATTTC
ATCCCAGATGATGTCAAGGGCATCTGGAAGGACAAGATTCCCATGGGTCG
CGAGGGAGAACCCGAGGAGCTGAAGGGCGCGTATCTGTACCTGGCATCGG
ATGCATCCAGCTACACCACTGGAGCAGACATTGTGGTTGACGGCGGCTAC
TGCGCCCCGTAGCCCAGGCGTACAAGGTCGAAATCACCAAGCCCGAAGCC
GTGCAGGCGGCCGTTGACCAGGTTGTGAAAGACTTCAATGGCCGACTAGA
CGTTTTCATCGCCAATGCCGGTATCCCCTGGACTAAAGGTCCCATGGTTG
ACGGTCCACTGGACCACTACTCGAGTGTTGTCGACGTCGACCTGAACGGA
ACTTTCTACTGCGCCAGGGCAGCGGCAACCCACTGGAGGAGACAAAAGGA
GGAGGGCACCGATATCAATGGTAACGCGCTCAACAACTTCACCTATGGCA
GCTTTGTGGCCACCGCTTCCATGAGCGGTCACATTGTCAACTTCCCTCAG
ATGCAGGCAGCATACAACGCCTCCAAAGCGGGTGTCATCCATCTTTATGG
CTGCCAACCCTGTGGAAAATGGACTATTTGTCCATAACAACACTACCGCT
CCAGCCCACCCCGGCTTGCTGAGCATGTTCTCACTGAAGGGCAAGACTGC
CATCGTTACCGGCGCCGGTGCTGGCATCGGCCTTTCCGTAGCTATTGGCC
TGGCTGAAGCTGGTGCAAATGTGGCCTTGTGGTATAGCAGCAACCCCAAC
TGCATCGAGCGGGCCGCGGAAATTGCCTCCAAGTATGGTGTCCAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LXR3ATCC10864_009176Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009176-T1ATCC10864_009176-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009176-T1.cdsATCC10864_009176-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009176-T1.exon3ATCC10864_009176-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009176-T1.exon2ATCC10864_009176-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009176-T1.exon1ATCC10864_009176-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF08659
InterProIPR002347
PFAMPF00106
InterProIPR036291
InterProIPR020904
PFAMPF13561
Properties
Property NameValue
ProductL-xylulose reductase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000208supercontigMCQH01000208:413703..414704 -
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