You are here

Home

ATCC10864_009351-T1, ATCC10864_009351-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009351-T1
Unique NameATCC10864_009351-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000210:76681..78610-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009351-T1 ID=ATCC10864_009351-T1|Name=ATCC10864_009351-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1930bp|location=Sequence derived from alignment at MCQH01000210:76681..78610- (Aspergillus niger ATCC 10864)
ATGGACAGCGCTTCAACTACACGTAGTTGCCGGCGTTGTAGCCAGAAAAA
GATACGATGTGACAAATCCCAGCCTTGCGCGAGTTGCATCAAGTCGGCCT
CGGAGTGCATCTTCCCAGGTCCCGGCCGAGCCCGACGACGAAAGAAACGG
CCACTGAAGGCTCAACTTGTGTCGCGGCTGAAGAGCCTGGAGAAGGAGGT
GCAGGTTTTGACTCACAAGCTGGAGGCTGTGAATCAGAGGTCGAAACAGC
ATCCCCTGACGACAGACAATAGAGGCGCCGTAGAAGGCGAGCATGGGAAA
TTGTTAGTGGACAGAGAATCCATCCACTATATCAACCACCAGGTTCTTGT
TAATCTAGCAACCCAGGTTGGTAGGCTTTACAAGCATAACACTTCCGATA
CTGACACAGGGCTCCTTGGCGAGCCGTAACAGACGAACGAAGATAGCGAA
CACTTTAAGCATCGTCTCGAGAAGGGGGAGGATGAATCTGCGGTGCAAGA
AGTGGCATCAATCGGCAGGGAGTGTGAATTGGCGACCGGGAATCAATTTG
TGTTTCAGTATTCGTCGATGGCAGTTTCCCTGTCCGACTTCTACCCCAGC
AGCGCCCATCACCGTATCTTATGGAACTTATTCGAGGAGAATGTAGCCCC
GCTGGCTATGATCTTTCATAAACCGTGGCTTACTAGCATCTTGAACAGTG
CAGGTGCAACGGCTATCGTGGATGACAAGGCTTTCGAGGCTGTGAGGTTT
GCCGTCTACTTTGCTGCCACTACCAGCATGAGCCCAGAGCAGTGTACTGA
AACATCCAGCCAGGGCAGTCATCCCTGCAGCGATACTACCGGTTTGCCAC
ACAGCAAGCATTGGCGCGTGCCAATTTCCTCCAGTCGCAGAGCCTGGCCG
TGCTTCAGGCAACGACCCTCTTCTTAACTTGTTTGCGTGGGGCAGATGAT
GCCGCCTTCGTCCGGGCTACGACAGCGGCTATACATCGCATCGCACAGGG
ACTCGGGTTACATCGCGATGGTACCTACCCCGGACTGAGCCCTTTCGAAA
CCGAGGTACGGCGGCGGCTCTGGTGGACCATATACTTGTTAGACTGCCAG
TCTTCCGAGTTTCGTGCTTATCGGTCGGTATGCAAATAAAAGAAGGCACC
TACAACACCAAGTTACCCCTGAATATCCACGACTCGGATATATCCCCACA
GTCTAGTGCGGTTCCTGATGAAAGGTCTTGTTTCACTGATATGTAATTTT
GTTTGATACGGTGTGAAATGACGGTGCTTCATCGAAAGCTTCATTCAGAT
CTGCGTTGTAGCAGCAGCAATTACGATGAAGGCGGCTCACTGAACGCGGT
GAAAAGGCTCCATGGGTTGAAAGAGATACACAATCGATTGCAGAGGCAGT
ACCTGGGGCTCTGTGACGTCTCAATTCCATTGCAGTGGGTGACAGCCACC
GTCATCCGCCTGGCTCTTGCTCGATCATGGTTGATTGCCCACCTCCCTGA
AGGCATGTCCGCGGCAGAGCAGGTGTCGTTGATGGCACGCTCAGACGTGG
AAGACCTCAAGCGGGGAAAGCTCTTCGTGACAGCCATTGAAATATTGGAA
TTTGCGTATTTGCTCGAGACCGACCCTCGCACCAAGAAGTGGTCATGGCT
CTTCCAGGGATACCCGCAATGGCATGCTGCCATCTTTCTCCTTGAGCAGA
TTGGCATTGGACCACAGACAATGCTGACTGACCGGGCCTGGGCTGTAGTA
GTCAAAGTCGTCACACGTTGGAGAAACACCGACTATCAAAAGGACGGGGT
GATCTCAATCTTAGTCTCCCGGCTTATGGCGCAAGCTGCAGTCGCACAGG
GATGCATCTGGGACGGGAGAGAGAGAGAAGACGGGCCAGGATCACCGCCT
GAAAACCTATCCTATAGCAAGAATCAATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000210:76681..78610-

>ATCC10864_009351-T1 ID=ATCC10864_009351-T1|Name=ATCC10864_009351-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6108bp|location=Sequence derived from alignment at MCQH01000210:76681..78610- (Aspergillus niger ATCC 10864)
CTTCATTCAGATCTGCGTTGTAGCAGCAGCAATTACGATGAAGGCGGCTC
ACTGAACGCGGTGAAAAGGCTCCATGGGTTGAAAGAGATACACAATCGAT
TGCAGAGGCAGTACCTGGGGCTCTGTGACGTCTCAATTCCATTGCAGTGG
GTGACAGCCACCGTCATCCGCCTGGCTCTTGCTCGATCATGGTTGATTGC
CCACCTCCCTGAAGGCATGTCCGCGGCAGAGCAGGTGTCGTTGATGGCAC
GCTCAGACGTGGAAGACCTCAAGCGGGGAAAGCTCTTCGTGACAGCCATT
GAAATATTGGAATTTGCGTATTTGCTCGAGACCGACCCTCGCACCAAGAA
GTGGTCATGGCTCTTCCAGGGATACCCGCAATGGCATGCTGCCATCTTTC
TCCTTGAGCAGATTGGCATTGGACCACAGACAATGCTGACTGACCGGGCC
TGGGCTGTAGTAGTCAAAGTCGTCACACGTTGGAGAAACACCGACTATCA
AAAGGACGGGGTGATCTCAATCTTAGTCTCCCGGCTTATGGCGCAAGCTG
CAGTCGCACAGGGATGCATCTGGGACGGGAGAGAGAGAGAAGACGGGCCA
GGATCACCGCCTGAAAACCTATCCTATAGCAAGAATCAATAAATGATGCC
GCCTTCGTCCGGGCTACGACAGCGGCTATACATCGCATCGCACAGGGACT
CGGGTTACATCGCGATGGTACCTACCCCGGACTGAGCCCTTTCGAAACCG
AGACGAACGAAGATAGCGAACACTTTAAGCATCGTCTCGAGAAGGGGGAG
GATGAATCTGCGGTGCAAGAAGTGGCATCAATCGGCAGGGAGTGTGAATT
GGCGACCGGGAATCAATTTGTGTTTCAGTATTCGTCGATGGCAGTTTCCC
TGTCCGACTTCTACCCCAGCAGCGCCCATCACCGTATCTTATGGAACTTA
TTCGAGGAGAATGTAGCCCCGCTGGCTATGATCTTTCATAAACCGTGGCT
TACTAGCATCTTGAACAGTGCAGGTGCAACGGCTATCGTGGATGACAAGG
CTTTCGAGGCTGTGAGGTTTGCCGTCTACTTTGCTGCCACTACCAGCATG
AGCCCAGAGCAGTGTACTGAAACATCCAGCCAGGGCAGTCATCCCTGCAG
CGATACTACCGATGGACAGCGCTTCAACTACACGTAGTTGCCGGCGTTGT
AGCCAGAAAAAGATACGATGTGACAAATCCCAGCCTTGCGCGAGTTGCAT
CAAGTCGGCCTCGGAGTGCATCTTCCCAGGTCCCGGCCGAGCCCGACGAC
GAAAGAAACGGCCACTGAAGGCTCAACTTGTGTCGCGGCTGAAGAGCCTG
GAGAAGGAGGTGCAGGTTTTGACTCACAAGCTGGAGGCTGTGAATCAGAG
GTCGAAACAGCATCCCCTGACGACAGACAATAGAGGCGCCGTAGAAGGCG
AGCATGGGAAATTGTTAGTGGACAGAGAATCCATCCACTATATCAACCAC
CAGGTTCTTGTTAATCTAGCAACCCAGCTTCATTCAGATCTGCGTTGTAG
CAGCAGCAATTACGATGAAGGCGGCTCACTGAACGCGGTGAAAAGGCTCC
ATGGGTTGAAAGAGATACACAATCGATTGCAGAGGCAGTACCTGGGGCTC
TGTGACGTCTCAATTCCATTGCAGTGGGTGACAGCCACCGTCATCCGCCT
GGCTCTTGCTCGATCATGGTTGATTGCCCACCTCCCTGAAGGCATGTCCG
CGGCAGAGCAGGTGTCGTTGATGGCACGCTCAGACGTGGAAGACCTCAAG
CGGGGAAAGCTCTTCGTGACAGCCATTGAAATATTGGAATTTGCGTATTT
GCTCGAGACCGACCCTCGCACCAAGAAGTGGTCATGGCTCTTCCAGGGAT
ACCCGCAATGGCATGCTGCCATCTTTCTCCTTGAGCAGATTGGCATTGGA
CCACAGACAATGCTGACTGACCGGGCCTGGGCTGTAGTAGTCAAAGTCGT
CACACGTTGGAGAAACACCGACTATCAAAAGGACGGGGTGATCTCAATCT
TAGTCTCCCGGCTTATGGCGCAAGCTGCAGTCGCACAGGGATGCATCTGG
GACGGGAGAGAGAGAGAAGACGGGCCAGGATCACCGCCTGAAAACCTATC
CTATAGCAAGAATCAATAAATGATGCCGCCTTCGTCCGGGCTACGACAGC
GGCTATACATCGCATCGCACAGGGACTCGGGTTACATCGCGATGGTACCT
ACCCCGGACTGAGCCCTTTCGAAACCGAGACGAACGAAGATAGCGAACAC
TTTAAGCATCGTCTCGAGAAGGGGGAGGATGAATCTGCGGTGCAAGAAGT
GGCATCAATCGGCAGGGAGTGTGAATTGGCGACCGGGAATCAATTTGTGT
TTCAGTATTCGTCGATGGCAGTTTCCCTGTCCGACTTCTACCCCAGCAGC
GCCCATCACCGTATCTTATGGAACTTATTCGAGGAGAATGTAGCCCCGCT
GGCTATGATCTTTCATAAACCGTGGCTTACTAGCATCTTGAACAGTGCAG
GTGCAACGGCTATCGTGGATGACAAGGCTTTCGAGGCTGTGAGGTTTGCC
GTCTACTTTGCTGCCACTACCAGCATGAGCCCAGAGCAGTGTACTGAAAC
ATCCAGCCAGGGCAGTCATCCCTGCAGCGATACTACCGATGGACAGCGCT
TCAACTACACGTAGTTGCCGGCGTTGTAGCCAGAAAAAGATACGATGTGA
CAAATCCCAGCCTTGCGCGAGTTGCATCAAGTCGGCCTCGGAGTGCATCT
TCCCAGGTCCCGGCCGAGCCCGACGACGAAAGAAACGGCCACTGAAGGCT
CAACTTGTGTCGCGGCTGAAGAGCCTGGAGAAGGAGGTGCAGGTTTTGAC
TCACAAGCTGGAGGCTGTGAATCAGAGGTCGAAACAGCATCCCCTGACGA
CAGACAATAGAGGCGCCGTAGAAGGCGAGCATGGGAAATTGTTAGTGGAC
AGAGAATCCATCCACTATATCAACCACCAGGTTCTTGTTAATCTAGCAAC
CCAGCTTCATTCAGATCTGCGTTGTAGCAGCAGCAATTACGATGAAGGCG
GCTCACTGAACGCGGTGAAAAGGCTCCATGGGTTGAAAGAGATACACAAT
CGATTGCAGAGGCAGTACCTGGGGCTCTGTGACGTCTCAATTCCATTGCA
GTGGGTGACAGCCACCGTCATCCGCCTGGCTCTTGCTCGATCATGGTTGA
TTGCCCACCTCCCTGAAGGCATGTCCGCGGCAGAGCAGGTGTCGTTGATG
GCACGCTCAGACGTGGAAGACCTCAAGCGGGGAAAGCTCTTCGTGACAGC
CATTGAAATATTGGAATTTGCGTATTTGCTCGAGACCGACCCTCGCACCA
AGAAGTGGTCATGGCTCTTCCAGGGATACCCGCAATGGCATGCTGCCATC
TTTCTCCTTGAGCAGATTGGCATTGGACCACAGACAATGCTGACTGACCG
GGCCTGGGCTGTAGTAGTCAAAGTCGTCACACGTTGGAGAAACACCGACT
ATCAAAAGGACGGGGTGATCTCAATCTTAGTCTCCCGGCTTATGGCGCAA
GCTGCAGTCGCACAGGGATGCATCTGGGACGGGAGAGAGAGAGAAGACGG
GCCAGGATCACCGCCTGAAAACCTATCCTATAGCAAGAATCAATAAATGA
TGCCGCCTTCGTCCGGGCTACGACAGCGGCTATACATCGCATCGCACAGG
GACTCGGGTTACATCGCGATGGTACCTACCCCGGACTGAGCCCTTTCGAA
ACCGAGACGAACGAAGATAGCGAACACTTTAAGCATCGTCTCGAGAAGGG
GGAGGATGAATCTGCGGTGCAAGAAGTGGCATCAATCGGCAGGGAGTGTG
AATTGGCGACCGGGAATCAATTTGTGTTTCAGTATTCGTCGATGGCAGTT
TCCCTGTCCGACTTCTACCCCAGCAGCGCCCATCACCGTATCTTATGGAA
CTTATTCGAGGAGAATGTAGCCCCGCTGGCTATGATCTTTCATAAACCGT
GGCTTACTAGCATCTTGAACAGTGCAGGTGCAACGGCTATCGTGGATGAC
AAGGCTTTCGAGGCTGTGAGGTTTGCCGTCTACTTTGCTGCCACTACCAG
CATGAGCCCAGAGCAGTGTACTGAAACATCCAGCCAGGGCAGTCATCCCT
GCAGCGATACTACCGATGGACAGCGCTTCAACTACACGTAGTTGCCGGCG
TTGTAGCCAGAAAAAGATACGATGTGACAAATCCCAGCCTTGCGCGAGTT
GCATCAAGTCGGCCTCGGAGTGCATCTTCCCAGGTCCCGGCCGAGCCCGA
CGACGAAAGAAACGGCCACTGAAGGCTCAACTTGTGTCGCGGCTGAAGAG
CCTGGAGAAGGAGGTGCAGGTTTTGACTCACAAGCTGGAGGCTGTGAATC
AGAGGTCGAAACAGCATCCCCTGACGACAGACAATAGAGGCGCCGTAGAA
GGCGAGCATGGGAAATTGTTAGTGGACAGAGAATCCATCCACTATATCAA
CCACCAGGTTCTTGTTAATCTAGCAACCCAGCTTCATTCAGATCTGCGTT
GTAGCAGCAGCAATTACGATGAAGGCGGCTCACTGAACGCGGTGAAAAGG
CTCCATGGGTTGAAAGAGATACACAATCGATTGCAGAGGCAGTACCTGGG
GCTCTGTGACGTCTCAATTCCATTGCAGTGGGTGACAGCCACCGTCATCC
GCCTGGCTCTTGCTCGATCATGGTTGATTGCCCACCTCCCTGAAGGCATG
TCCGCGGCAGAGCAGGTGTCGTTGATGGCACGCTCAGACGTGGAAGACCT
CAAGCGGGGAAAGCTCTTCGTGACAGCCATTGAAATATTGGAATTTGCGT
ATTTGCTCGAGACCGACCCTCGCACCAAGAAGTGGTCATGGCTCTTCCAG
GGATACCCGCAATGGCATGCTGCCATCTTTCTCCTTGAGCAGATTGGCAT
TGGACCACAGACAATGCTGACTGACCGGGCCTGGGCTGTAGTAGTCAAAG
TCGTCACACGTTGGAGAAACACCGACTATCAAAAGGACGGGGTGATCTCA
ATCTTAGTCTCCCGGCTTATGGCGCAAGCTGCAGTCGCACAGGGATGCAT
CTGGGACGGGAGAGAGAGAGAAGACGGGCCAGGATCACCGCCTGAAAACC
TATCCTATAGCAAGAATCAATAAATGATGCCGCCTTCGTCCGGGCTACGA
CAGCGGCTATACATCGCATCGCACAGGGACTCGGGTTACATCGCGATGGT
ACCTACCCCGGACTGAGCCCTTTCGAAACCGAGACGAACGAAGATAGCGA
ACACTTTAAGCATCGTCTCGAGAAGGGGGAGGATGAATCTGCGGTGCAAG
AAGTGGCATCAATCGGCAGGGAGTGTGAATTGGCGACCGGGAATCAATTT
GTGTTTCAGTATTCGTCGATGGCAGTTTCCCTGTCCGACTTCTACCCCAG
CAGCGCCCATCACCGTATCTTATGGAACTTATTCGAGGAGAATGTAGCCC
CGCTGGCTATGATCTTTCATAAACCGTGGCTTACTAGCATCTTGAACAGT
GCAGGTGCAACGGCTATCGTGGATGACAAGGCTTTCGAGGCTGTGAGGTT
TGCCGTCTACTTTGCTGCCACTACCAGCATGAGCCCAGAGCAGTGTACTG
AAACATCCAGCCAGGGCAGTCATCCCTGCAGCGATACTACCGATGGACAG
CGCTTCAACTACACGTAGTTGCCGGCGTTGTAGCCAGAAAAAGATACGAT
GTGACAAATCCCAGCCTTGCGCGAGTTGCATCAAGTCGGCCTCGGAGTGC
ATCTTCCCAGGTCCCGGCCGAGCCCGACGACGAAAGAAACGGCCACTGAA
GGCTCAACTTGTGTCGCGGCTGAAGAGCCTGGAGAAGGAGGTGCAGGTTT
TGACTCACAAGCTGGAGGCTGTGAATCAGAGGTCGAAACAGCATCCCCTG
ACGACAGACAATAGAGGCGCCGTAGAAGGCGAGCATGGGAAATTGTTAGT
GGACAGAGAATCCATCCACTATATCAACCACCAGGTTCTTGTTAATCTAG
CAACCCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009351ATCC10864_009351Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009351-T1ATCC10864_009351-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009351-T1.cdsATCC10864_009351-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009351-T1.exon4ATCC10864_009351-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_009351-T1.exon3ATCC10864_009351-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_009351-T1.exon2ATCC10864_009351-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_009351-T1.exon1ATCC10864_009351-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001138
PFAMPF00172
InterProIPR036864
Properties
Property NameValue
NoteantiSMASH:Cluster_1000210.2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000210supercontigMCQH01000210:76681..78610 -
Powered by Drupal