You are here

Home

ATCC10864_009376-T1, ATCC10864_009376-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_009376-T1
Unique NameATCC10864_009376-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000210:154297..155475+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_009376-T1 ID=ATCC10864_009376-T1|Name=ATCC10864_009376-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1179bp|location=Sequence derived from alignment at MCQH01000210:154297..155475+ (Aspergillus niger ATCC 10864)
ATGCGTCTCCGTTTTCTGTGTGTAGTGGGCGCCTGGCTGGCCAGCTGTGC
TGCCAGTCCAGTTGCCAGTCGTTCTGCGGATGCTTCCATGCCCCAAAAGG
CACTTGCAAACTCGCACGCCTCCTTCCCCATCGTCACCGGCCATGAGATC
CATATGCCATATGCTACAATCCCAGGATCCAAGGAGGATGAGGCCAAGTA
TACCCCCAGACCATATCTGGTACGTGCGCCCGTACTAACAATGGTCGGAA
AAGGCCCAAGCATCACTAACCTTGTCATCTAGGCGATGAAAATCCGCACG
GAGAGCAATGCTCTATTTGTCAATGATGTTCCCGTCTTCCCGAGTTCGTT
TCCCATGCACTTACCGGCAACCCGATACCAGGACGTGTCCGGTCAAAATC
CGGAGCATCTGCTCCTGCAGTACGCGGTGGACATCGAATACATGCCCCCC
CGTCCAGATGGATCCTTGGTGCAAGACATCTACCGTGTGCAACTCAAGTT
TTTCGATCCCTCCGGCCATCCTGCCACGACGAATACCGTCCACGTTCGAT
TGTCCACGCAGCAGTCGGGCGAATTGTACATTACACAGATCATCGTCGAG
CCATTTCTCGACTACTACCATGATGCCCACGGCGATGGAAACTGTGTCTG
GCGCACCAAGTACTGGAACCTGATTATGGAAAAGTACCGTGCCTGGCGCG
AGCAGAAAGGACCCGGCCATCACAAAGGGCCCGAGTCGCAGAAGAGTGAC
GACCACGAACACAATGACCATCATCATCACCCCAAGGCAAACAGCCCCGT
CTCCAATGAACAGCCCACAGCACACCAGGAGGCTCAAGAGAACAGCCCAC
TTTCCAAGGCTGATCCCAGCAACAGTGCACCCGAGTCCCCGTTCCGGGTG
TATGGGGTGGACAAGTCTCTGCGACCGACGGCTTTGCGTAACAAGGATTA
CCGCCGGGACTTCTGGCGACTGGTGGTGCCCGCCATCATCCCGGGACTCC
TGGGCGCGGTTGCTGGATTGGTAGTGTGCACGATGGGGCTGCTCCTTTGG
AAGATGGTGGCATGCACGTGTGCCAGGATGCAGGGTCGGAGATGTCGGAA
GCATTGCCAACGGAAGCAAGGCGTTTGCTTATCGGAAAAGCAACGTCTGC
TGCAGCAGGATCAGCTGAGTGAGGCGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000210:154297..155475+

>ATCC10864_009376-T1 ID=ATCC10864_009376-T1|Name=ATCC10864_009376-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2232bp|location=Sequence derived from alignment at MCQH01000210:154297..155475+ (Aspergillus niger ATCC 10864)
ATGCGTCTCCGTTTTCTGTGTGTAGTGGGCGCCTGGCTGGCCAGCTGTGC
TGCCAGTCCAGTTGCCAGTCGTTCTGCGGATGCTTCCATGCCCCAAAAGG
CACTTGCAAACTCGCACGCCTCCTTCCCCATCGTCACCGGCCATGAGATC
CATATGCCATATGCTACAATCCCAGGATCCAAGGAGGATGAGGCCAAGTA
TACCCCCAGACCATATCTGGCGATGAAAATCCGCACGGAGAGCAATGCTC
TATTTGTCAATGATGTTCCCGTCTTCCCGAGTTCGTTTCCCATGCACTTA
CCGGCAACCCGATACCAGGACGTGTCCGGTCAAAATCCGGAGCATCTGCT
CCTGCAGTACGCGGTGGACATCGAATACATGCCCCCCCGTCCAGATGGAT
CCTTGGTGCAAGACATCTACCGTGTGCAACTCAAGTTTTTCGATCCCTCC
GGCCATCCTGCCACGACGAATACCGTCCACGTTCGATTGTCCACGCAGCA
GTCGGGCGAATTGTACATTACACAGATCATCGTCGAGCCATTTCTCGACT
ACTACCATGATGCCCACGGCGATGGAAACTGTGTCTGGCGCACCAAGTAC
TGGAACCTGATTATGGAAAAGTACCGTGCCTGGCGCGAGCAGAAAGGACC
CGGCCATCACAAAGGGCCCGAGTCGCAGAAGAGTGACGACCACGAACACA
ATGACCATCATCATCACCCCAAGGCAAACAGCCCCGTCTCCAATGAACAG
CCCACAGCACACCAGGAGGCTCAAGAGAACAGCCCACTTTCCAAGGCTGA
TCCCAGCAACAGTGCACCCGAGTCCCCGTTCCGGGTGTATGGGGTGGACA
AGTCTCTGCGACCGACGGCTTTGCGTAACAAGGATTACCGCCGGGACTTC
TGGCGACTGGTGGTGCCCGCCATCATCCCGGGACTCCTGGGCGCGGTTGC
TGGATTGGTAGTGTGCACGATGGGGCTGCTCCTTTGGAAGATGGTGGCAT
GCACGTGTGCCAGGATGCAGGGTCGGAGATGTCGGAAGCATTGCCAACGG
AAGCAAGGCGTTTGCTTATCGGAAAAGCAACGTCTGCTGCAGCAGGATCA
GCTGAGTGAGGCGTAGATGCGTCTCCGTTTTCTGTGTGTAGTGGGCGCCT
GGCTGGCCAGCTGTGCTGCCAGTCCAGTTGCCAGTCGTTCTGCGGATGCT
TCCATGCCCCAAAAGGCACTTGCAAACTCGCACGCCTCCTTCCCCATCGT
CACCGGCCATGAGATCCATATGCCATATGCTACAATCCCAGGATCCAAGG
AGGATGAGGCCAAGTATACCCCCAGACCATATCTGGCGATGAAAATCCGC
ACGGAGAGCAATGCTCTATTTGTCAATGATGTTCCCGTCTTCCCGAGTTC
GTTTCCCATGCACTTACCGGCAACCCGATACCAGGACGTGTCCGGTCAAA
ATCCGGAGCATCTGCTCCTGCAGTACGCGGTGGACATCGAATACATGCCC
CCCCGTCCAGATGGATCCTTGGTGCAAGACATCTACCGTGTGCAACTCAA
GTTTTTCGATCCCTCCGGCCATCCTGCCACGACGAATACCGTCCACGTTC
GATTGTCCACGCAGCAGTCGGGCGAATTGTACATTACACAGATCATCGTC
GAGCCATTTCTCGACTACTACCATGATGCCCACGGCGATGGAAACTGTGT
CTGGCGCACCAAGTACTGGAACCTGATTATGGAAAAGTACCGTGCCTGGC
GCGAGCAGAAAGGACCCGGCCATCACAAAGGGCCCGAGTCGCAGAAGAGT
GACGACCACGAACACAATGACCATCATCATCACCCCAAGGCAAACAGCCC
CGTCTCCAATGAACAGCCCACAGCACACCAGGAGGCTCAAGAGAACAGCC
CACTTTCCAAGGCTGATCCCAGCAACAGTGCACCCGAGTCCCCGTTCCGG
GTGTATGGGGTGGACAAGTCTCTGCGACCGACGGCTTTGCGTAACAAGGA
TTACCGCCGGGACTTCTGGCGACTGGTGGTGCCCGCCATCATCCCGGGAC
TCCTGGGCGCGGTTGCTGGATTGGTAGTGTGCACGATGGGGCTGCTCCTT
TGGAAGATGGTGGCATGCACGTGTGCCAGGATGCAGGGTCGGAGATGTCG
GAAGCATTGCCAACGGAAGCAAGGCGTTTGCTTATCGGAAAAGCAACGTC
TGCTGCAGCAGGATCAGCTGAGTGAGGCGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_009376ATCC10864_009376Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009376-T1.exon1ATCC10864_009376-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_009376-T1.exon2ATCC10864_009376-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009376-T1.cdsATCC10864_009376-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_009376-T1ATCC10864_009376-T1-proteinAspergillus niger ATCC 10864polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000210supercontigMCQH01000210:154297..155475 +
Powered by Drupal