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ATCC10864_010542-T1, ATCC10864_010542-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010542-T1
Unique NameATCC10864_010542-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000240:15080..16121-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010542-T1 ID=ATCC10864_010542-T1|Name=ATCC10864_010542-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1042bp|location=Sequence derived from alignment at MCQH01000240:15080..16121- (Aspergillus niger ATCC 10864)
ATGGCATTATTCCTCAACTCTCGGCTACTCAAATGCACTGGCAGACAATT
CCAGGTAATCTTTCCTCACCCCATCCGGCTCTTTCGGCGAAGTCATATTA
ATAGCTTTCAGTTACTAGCAGGTTTTAGAGGCTACAGCACTTTCTCTGAC
ATAACCCATCATGCACAGCCAGCGAGCGATTCCCTCCACCCAGCAGCCTC
GGCTGAATCCAGTGCACTGTTAGCGCTCTCACGACTACCTTGAACAACCA
GGAGAGCTAACTTGTGTTCTTACAGACAATCGACCGAACTGCAAACGAAA
CAATGGTCTGAACTTTGACTGATAATTCCAATAAATTGGTCTCGATGACA
TGCGCTTACTCATGATTAGGAGGGAACGCCTTGAGAGCATTAATAGTAAG
GCTCGACTTCCCAGGAGCGTTCAAGCTGTGTACCTACGACCCCTCCGGAG
GAAGGCCGAGTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGATCTTACA
GTGTACGGAACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGCCGCTTAC
TACCTGAACCTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAATCGTTGA
ACGATGGACCGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGTCAGGAGA
ATTTTGAAAGAATAACACTTCGACGCTTGGTACAAATCAAAGACGGCAAC
CCTCAAGTTGTACAGACATGGCTAGCATTCTTGCGCAAGCATGCTTTCTA
TGGAGTCGGCATGAAAGCAAATGTCTGGGAACATGAAAGCCTCGGTATAT
TGCTATTCTCATCTCGCTTTGTCCTGGTCACTGTTTGCCACGTCACTAAC
GATATCGTGGACACAGATGTAGCTGCAAACATGGACAGCACTCTTCCAGA
AGTCAAGAAGACGCTTGAGCCTTACCTTTCACAATTTGGTCAGCGGCAAG
ATGCAACATCTCATGACTCTATCTTAGACATCCTGGACAACGAACGCTTC
GTTGCATACAAGGGCCCTTTAACTACAGCACGCAAGGCATAA
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Coding sequence (CDS) from alignment at MCQH01000240:15080..16121-

>ATCC10864_010542-T1 ID=ATCC10864_010542-T1|Name=ATCC10864_010542-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3960bp|location=Sequence derived from alignment at MCQH01000240:15080..16121- (Aspergillus niger ATCC 10864)
ATGTAGCTGCAAACATGGACAGCACTCTTCCAGAAGTCAAGAAGACGCTT
GAGCCTTACCTTTCACAATTTGGTCAGCGGCAAGATGCAACATCTCATGA
CTCTATCTTAGACATCCTGGACAACGAACGCTTCGTTGCATACAAGGGCC
CTTTAACTACAGCACGCAAGGCATAAGAGGGAACGCCTTGAGAGCATTAA
TAGTAAGGCTCGACTTCCCAGGAGCGTTCAAGCTGTGTACCTACGACCCC
TCCGGAGGAAGGCCGAGTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGA
TCTTACAGTGTACGGAACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGC
CGCTTACTACCTGAACCTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAA
TCGTTGAACGATGGACCGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGT
CAGGAGAATTTTGAAAGAATAACACTTCGACGCTTGGTACAAATCAAAGA
CGGCAACCCTCAAGTTGTACAGACATGGCTAGCATTCTTGCGCAAGCATG
CTTTCTATGGAGTCGGCATGAAAGCAAATGTCTGGGAACATGAAAGCCTC
GACAATCGACCGAACTGCAAACGAAACAATGTTACTAGCAGGTTTTAGAG
GCTACAGCACTTTCTCTGACATAACCCATCATGCACAGCCAGCGAGCGAT
TCCCTCCACCCAGCAGCCTCGGCTGAATCCAGTGCACTATGGCATTATTC
CTCAACTCTCGGCTACTCAAATGCACTGGCAGACAATTCCAGATGTAGCT
GCAAACATGGACAGCACTCTTCCAGAAGTCAAGAAGACGCTTGAGCCTTA
CCTTTCACAATTTGGTCAGCGGCAAGATGCAACATCTCATGACTCTATCT
TAGACATCCTGGACAACGAACGCTTCGTTGCATACAAGGGCCCTTTAACT
ACAGCACGCAAGGCATAAGAGGGAACGCCTTGAGAGCATTAATAGTAAGG
CTCGACTTCCCAGGAGCGTTCAAGCTGTGTACCTACGACCCCTCCGGAGG
AAGGCCGAGTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGATCTTACAG
TGTACGGAACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGCCGCTTACT
ACCTGAACCTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAATCGTTGAA
CGATGGACCGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGTCAGGAGAA
TTTTGAAAGAATAACACTTCGACGCTTGGTACAAATCAAAGACGGCAACC
CTCAAGTTGTACAGACATGGCTAGCATTCTTGCGCAAGCATGCTTTCTAT
GGAGTCGGCATGAAAGCAAATGTCTGGGAACATGAAAGCCTCGACAATCG
ACCGAACTGCAAACGAAACAATGTTACTAGCAGGTTTTAGAGGCTACAGC
ACTTTCTCTGACATAACCCATCATGCACAGCCAGCGAGCGATTCCCTCCA
CCCAGCAGCCTCGGCTGAATCCAGTGCACTATGGCATTATTCCTCAACTC
TCGGCTACTCAAATGCACTGGCAGACAATTCCAGATGTAGCTGCAAACAT
GGACAGCACTCTTCCAGAAGTCAAGAAGACGCTTGAGCCTTACCTTTCAC
AATTTGGTCAGCGGCAAGATGCAACATCTCATGACTCTATCTTAGACATC
CTGGACAACGAACGCTTCGTTGCATACAAGGGCCCTTTAACTACAGCACG
CAAGGCATAAGAGGGAACGCCTTGAGAGCATTAATAGTAAGGCTCGACTT
CCCAGGAGCGTTCAAGCTGTGTACCTACGACCCCTCCGGAGGAAGGCCGA
GTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGATCTTACAGTGTACGGA
ACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGCCGCTTACTACCTGAAC
CTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAATCGTTGAACGATGGAC
CGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGTCAGGAGAATTTTGAAA
GAATAACACTTCGACGCTTGGTACAAATCAAAGACGGCAACCCTCAAGTT
GTACAGACATGGCTAGCATTCTTGCGCAAGCATGCTTTCTATGGAGTCGG
CATGAAAGCAAATGTCTGGGAACATGAAAGCCTCGACAATCGACCGAACT
GCAAACGAAACAATGTTACTAGCAGGTTTTAGAGGCTACAGCACTTTCTC
TGACATAACCCATCATGCACAGCCAGCGAGCGATTCCCTCCACCCAGCAG
CCTCGGCTGAATCCAGTGCACTATGGCATTATTCCTCAACTCTCGGCTAC
TCAAATGCACTGGCAGACAATTCCAGATGTAGCTGCAAACATGGACAGCA
CTCTTCCAGAAGTCAAGAAGACGCTTGAGCCTTACCTTTCACAATTTGGT
CAGCGGCAAGATGCAACATCTCATGACTCTATCTTAGACATCCTGGACAA
CGAACGCTTCGTTGCATACAAGGGCCCTTTAACTACAGCACGCAAGGCAT
AAGAGGGAACGCCTTGAGAGCATTAATAGTAAGGCTCGACTTCCCAGGAG
CGTTCAAGCTGTGTACCTACGACCCCTCCGGAGGAAGGCCGAGTTTGGCC
TTCCAGTCTGTGATCTTCAGTTGAGATCTTACAGTGTACGGAACGTCGAA
TTTTTCGCCGATTTTGCTGTGCGGGCCGCTTACTACCTGAACCTTCCTGT
CTCGGGGCCGGTGCCCTTGCCACGAATCGTTGAACGATGGACCGTCCCTA
GAAGTAACTTCGTGCACAAAAAGAGTCAGGAGAATTTTGAAAGAATAACA
CTTCGACGCTTGGTACAAATCAAAGACGGCAACCCTCAAGTTGTACAGAC
ATGGCTAGCATTCTTGCGCAAGCATGCTTTCTATGGAGTCGGCATGAAAG
CAAATGTCTGGGAACATGAAAGCCTCGACAATCGACCGAACTGCAAACGA
AACAATGTTACTAGCAGGTTTTAGAGGCTACAGCACTTTCTCTGACATAA
CCCATCATGCACAGCCAGCGAGCGATTCCCTCCACCCAGCAGCCTCGGCT
GAATCCAGTGCACTATGGCATTATTCCTCAACTCTCGGCTACTCAAATGC
ACTGGCAGACAATTCCAGATGTAGCTGCAAACATGGACAGCACTCTTCCA
GAAGTCAAGAAGACGCTTGAGCCTTACCTTTCACAATTTGGTCAGCGGCA
AGATGCAACATCTCATGACTCTATCTTAGACATCCTGGACAACGAACGCT
TCGTTGCATACAAGGGCCCTTTAACTACAGCACGCAAGGCATAAGAGGGA
ACGCCTTGAGAGCATTAATAGTAAGGCTCGACTTCCCAGGAGCGTTCAAG
CTGTGTACCTACGACCCCTCCGGAGGAAGGCCGAGTTTGGCCTTCCAGTC
TGTGATCTTCAGTTGAGATCTTACAGTGTACGGAACGTCGAATTTTTCGC
CGATTTTGCTGTGCGGGCCGCTTACTACCTGAACCTTCCTGTCTCGGGGC
CGGTGCCCTTGCCACGAATCGTTGAACGATGGACCGTCCCTAGAAGTAAC
TTCGTGCACAAAAAGAGTCAGGAGAATTTTGAAAGAATAACACTTCGACG
CTTGGTACAAATCAAAGACGGCAACCCTCAAGTTGTACAGACATGGCTAG
CATTCTTGCGCAAGCATGCTTTCTATGGAGTCGGCATGAAAGCAAATGTC
TGGGAACATGAAAGCCTCGACAATCGACCGAACTGCAAACGAAACAATGT
TACTAGCAGGTTTTAGAGGCTACAGCACTTTCTCTGACATAACCCATCAT
GCACAGCCAGCGAGCGATTCCCTCCACCCAGCAGCCTCGGCTGAATCCAG
TGCACTATGGCATTATTCCTCAACTCTCGGCTACTCAAATGCACTGGCAG
ACAATTCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RSM10ATCC10864_010542Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010542-T1ATCC10864_010542-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010542-T1.cdsATCC10864_010542-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010542-T1.exon5ATCC10864_010542-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_010542-T1.exon4ATCC10864_010542-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_010542-T1.exon3ATCC10864_010542-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010542-T1.exon2ATCC10864_010542-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010542-T1.exon1ATCC10864_010542-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001848
InterProIPR027486
InterProIPR036838
PFAMPF00338
Properties
Property NameValue
Productmitochondrial 37S ribosomal protein rsm10
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000240supercontigMCQH01000240:15080..16121 -
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