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ATCC10864_010552-T1, ATCC10864_010552-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010552-T1
Unique NameATCC10864_010552-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000240:38236..39135+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010552-T1 ID=ATCC10864_010552-T1|Name=ATCC10864_010552-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=900bp|location=Sequence derived from alignment at MCQH01000240:38236..39135+ (Aspergillus niger ATCC 10864)
ATGTCGTTGGATACACCAGCTTCATCCCTCAGTGCTTCAGATCCTCACGC
GCGGCTCCTGGGTGCCTCTTGTCTTGATTTCCTCCTGATAGAGCTCGTCC
CCATGGCGGAGCGCTTAGCGAAAGAACTTGCGTCAGAAGAGAAGCTACCA
GATGATGAAGAAATCCGGGAAACTACATTCTTTCGCCTCGAATCTCTAGG
TTACAGGGTTGGACAAGGGTTGGCTGAACGGTACGCTTGAAAGTCCGCTA
TTCGCCTTTGCGACGTCCTTTCGGCCCTCCAAGTTATGAATCCATTTGAC
AGGTGGATATGCATAAGAACAACATGATCACCGACAGATCGCAGGTGCTA
TTGATGGAAGTCCCGCAGCTAATGCATATCTGTTGTCGACCGGAGCAGAT
TCTCGCGCGATCGCCCACGATTTGCAGATAACCTAGACATCATAAAGTTC
CTGTGCAAGGACTTATGGACGATACTCTTTAAAAAGCAGGTGGATAACCT
GAAAACGAATCACCGGGTAGGCAGAACGAAATGCGGCCCCAAATCTCTAT
GAAGTGCCCTGGTTCGCATTTTGGGGGAAGAGGCTAATACCTGCACTACC
AGGGCGTGTATGTCTTGACTGATAACTCTTTTCGACCATTTGCAAGGATG
AGTACGTCTGTTCGAAGTGAGGCGGTATCTATGGCCCAAGCGGTGTGTTT
GTCCCGGGATACACGTATCCCCCAACATGTCAACTTTACATGATCTAACG
ACTTGCGGTAAATTATAGTATCTATGGTTTCCATGCGGTGTTATTCGCGG
TGCTCTATCAAACCTTGGTATTACAACCACAGTTCAAGCGGAATCTACAG
AGCTTCCAGGCGCAACCTTCCAAATCAAAACCGTCAACCCCAAGCCCTGA
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Coding sequence (CDS) from alignment at MCQH01000240:38236..39135+

>ATCC10864_010552-T1 ID=ATCC10864_010552-T1|Name=ATCC10864_010552-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2280bp|location=Sequence derived from alignment at MCQH01000240:38236..39135+ (Aspergillus niger ATCC 10864)
ATGTCGTTGGATACACCAGCTTCATCCCTCAGTGCTTCAGATCCTCACGC
GCGGCTCCTGGGTGCCTCTTGTCTTGATTTCCTCCTGATAGAGCTCGTCC
CCATGGCGGAGCGCTTAGCGAAAGAACTTGCGTCAGAAGAGAAGCTACCA
GATGATGAAGAAATCCGGGAAACTACATTCTTTCGCCTCGAATCTCTAGG
TTACAGGGTTGGACAAGGGTTGGCTGAACGATTCTCGCGCGATCGCCCAC
GATTTGCAGATAACCTAGACATCATAAAGTTCCTGTGCAAGGACTTATGG
ACGATACTCTTTAAAAAGCAGGTGGATAACCTGAAAACGAATCACCGGGG
CGTGTATGTCTTGACTGATAACTCTTTTCGACCATTTGCAAGGATGAGTA
CGTCTGTTCGAAGTGAGGCGGTATCTATGGCCCAAGCGTATCTATGGTTT
CCATGCGGTGTTATTCGCGGTGCTCTATCAAACCTTGGTATTACAACCAC
AGTTCAAGCGGAATCTACAGAGCTTCCAGGCGCAACCTTCCAAATCAAAA
CCGTCAACCCCAAGCCCTGAATGTCGTTGGATACACCAGCTTCATCCCTC
AGTGCTTCAGATCCTCACGCGCGGCTCCTGGGTGCCTCTTGTCTTGATTT
CCTCCTGATAGAGCTCGTCCCCATGGCGGAGCGCTTAGCGAAAGAACTTG
CGTCAGAAGAGAAGCTACCAGATGATGAAGAAATCCGGGAAACTACATTC
TTTCGCCTCGAATCTCTAGGTTACAGGGTTGGACAAGGGTTGGCTGAACG
ATTCTCGCGCGATCGCCCACGATTTGCAGATAACCTAGACATCATAAAGT
TCCTGTGCAAGGACTTATGGACGATACTCTTTAAAAAGCAGGTGGATAAC
CTGAAAACGAATCACCGGGGCGTGTATGTCTTGACTGATAACTCTTTTCG
ACCATTTGCAAGGATGAGTACGTCTGTTCGAAGTGAGGCGGTATCTATGG
CCCAAGCGTATCTATGGTTTCCATGCGGTGTTATTCGCGGTGCTCTATCA
AACCTTGGTATTACAACCACAGTTCAAGCGGAATCTACAGAGCTTCCAGG
CGCAACCTTCCAAATCAAAACCGTCAACCCCAAGCCCTGAATGTCGTTGG
ATACACCAGCTTCATCCCTCAGTGCTTCAGATCCTCACGCGCGGCTCCTG
GGTGCCTCTTGTCTTGATTTCCTCCTGATAGAGCTCGTCCCCATGGCGGA
GCGCTTAGCGAAAGAACTTGCGTCAGAAGAGAAGCTACCAGATGATGAAG
AAATCCGGGAAACTACATTCTTTCGCCTCGAATCTCTAGGTTACAGGGTT
GGACAAGGGTTGGCTGAACGATTCTCGCGCGATCGCCCACGATTTGCAGA
TAACCTAGACATCATAAAGTTCCTGTGCAAGGACTTATGGACGATACTCT
TTAAAAAGCAGGTGGATAACCTGAAAACGAATCACCGGGGCGTGTATGTC
TTGACTGATAACTCTTTTCGACCATTTGCAAGGATGAGTACGTCTGTTCG
AAGTGAGGCGGTATCTATGGCCCAAGCGTATCTATGGTTTCCATGCGGTG
TTATTCGCGGTGCTCTATCAAACCTTGGTATTACAACCACAGTTCAAGCG
GAATCTACAGAGCTTCCAGGCGCAACCTTCCAAATCAAAACCGTCAACCC
CAAGCCCTGAATGTCGTTGGATACACCAGCTTCATCCCTCAGTGCTTCAG
ATCCTCACGCGCGGCTCCTGGGTGCCTCTTGTCTTGATTTCCTCCTGATA
GAGCTCGTCCCCATGGCGGAGCGCTTAGCGAAAGAACTTGCGTCAGAAGA
GAAGCTACCAGATGATGAAGAAATCCGGGAAACTACATTCTTTCGCCTCG
AATCTCTAGGTTACAGGGTTGGACAAGGGTTGGCTGAACGATTCTCGCGC
GATCGCCCACGATTTGCAGATAACCTAGACATCATAAAGTTCCTGTGCAA
GGACTTATGGACGATACTCTTTAAAAAGCAGGTGGATAACCTGAAAACGA
ATCACCGGGGCGTGTATGTCTTGACTGATAACTCTTTTCGACCATTTGCA
AGGATGAGTACGTCTGTTCGAAGTGAGGCGGTATCTATGGCCCAAGCGTA
TCTATGGTTTCCATGCGGTGTTATTCGCGGTGCTCTATCAAACCTTGGTA
TTACAACCACAGTTCAAGCGGAATCTACAGAGCTTCCAGGCGCAACCTTC
CAAATCAAAACCGTCAACCCCAAGCCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0048193Golgi vesicle transport
GO:0043087regulation of GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010552ATCC10864_010552Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010552-T1.exon1ATCC10864_010552-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_010552-T1.exon2ATCC10864_010552-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010552-T1.exon3ATCC10864_010552-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010552-T1.exon4ATCC10864_010552-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010552-T1.cdsATCC10864_010552-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010552-T1ATCC10864_010552-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR037992
InterProIPR024096
InterProIPR007194
PFAMPF04051
Properties
Property NameValue
NoteBUSCO:EOG09263RY2
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000240supercontigMCQH01000240:38236..39135 +
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