You are here

Home

ATCC10864_010841-T1, ATCC10864_010841-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010841-T1
Unique NameATCC10864_010841-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000246:321917..322710-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010841-T1 ID=ATCC10864_010841-T1|Name=ATCC10864_010841-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=794bp|location=Sequence derived from alignment at MCQH01000246:321917..322710- (Aspergillus niger ATCC 10864)
ATGGCTCCGCACCACGAAGAGCACTACCATCCCAAGGATGCGATCGCGGC
ATCGATGAAGACCACTATGCTCACTGGTGGAGCGGGTCTTTTCGCCTCGG
CCGTCCAGAACACCCTCACCAGACAGAACGTCGGCCCGCTGGGCGTGTTC
ATCCGGAGCGGTGGTACCGTCGGTATCTTCGGTATGAATGCAATTGTGGA
CGCTTGGGCAATATGTCTTGGATTTAGTCGGTTGCTAACGATTTTCGCGT
CCAGCCGCCATGGGAGGTACCTACGAATTCGTGAAGACCGCATCCGCCAA
CCTTCGTGAGAAGGAAGACCACTGGAACGTCGCTCTGGGAGGTTTCTTCT
CCGGCGCCATCCTGGGTCTCCGAGGTCTGTTGCCCGCGATCCGACCGTTC
AATTGATCAAGCATTGGTTCTGACAGGTCCGCAGCTCGCACATTCCCCGC
CCTCCTGGGCTACGGCGTCGCTTTGGCCACCGCCACGGGCGCTTTCGAAT
ACACCGGTGGAACGTTGTTCGGCTACAAGAAGAACACCGATATCGACGAG
TTTGAGCGTCGGGAGCAGCTTCGGAAGACATACAGAATTCCCGCAGAGCA
GACCCTTGCCGAATTGGGCGAGGGACGAGGTACGTTTACTTCTGGAGGCA
GATTTCCGTCTGCTGGAAGGGAACCCACGACGTTGCTAACCCGGTTACAC
AGGTATTTATGGCCCCGGATACGCCGAGAGACGGGCGGAGAGAATCAAGG
AGGCATACGGTATCGAGGTTCCCACAACGGCTCCGGCATCATGA
back to top

Coding sequence (CDS) from alignment at MCQH01000246:321917..322710-

>ATCC10864_010841-T1 ID=ATCC10864_010841-T1|Name=ATCC10864_010841-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2352bp|location=Sequence derived from alignment at MCQH01000246:321917..322710- (Aspergillus niger ATCC 10864)
GTATTTATGGCCCCGGATACGCCGAGAGACGGGCGGAGAGAATCAAGGAG
GCATACGGTATCGAGGTTCCCACAACGGCTCCGGCATCATGACTCGCACA
TTCCCCGCCCTCCTGGGCTACGGCGTCGCTTTGGCCACCGCCACGGGCGC
TTTCGAATACACCGGTGGAACGTTGTTCGGCTACAAGAAGAACACCGATA
TCGACGAGTTTGAGCGTCGGGAGCAGCTTCGGAAGACATACAGAATTCCC
GCAGAGCAGACCCTTGCCGAATTGGGCGAGGGACGAGCCGCCATGGGAGG
TACCTACGAATTCGTGAAGACCGCATCCGCCAACCTTCGTGAGAAGGAAG
ACCACTGGAACGTCGCTCTGGGAGGTTTCTTCTCCGGCGCCATCCTGGGT
CTCCGAGATGGCTCCGCACCACGAAGAGCACTACCATCCCAAGGATGCGA
TCGCGGCATCGATGAAGACCACTATGCTCACTGGTGGAGCGGGTCTTTTC
GCCTCGGCCGTCCAGAACACCCTCACCAGACAGAACGTCGGCCCGCTGGG
CGTGTTCATCCGGAGCGGTGGTACCGTCGGTATCTTCGGTATTTATGGCC
CCGGATACGCCGAGAGACGGGCGGAGAGAATCAAGGAGGCATACGGTATC
GAGGTTCCCACAACGGCTCCGGCATCATGACTCGCACATTCCCCGCCCTC
CTGGGCTACGGCGTCGCTTTGGCCACCGCCACGGGCGCTTTCGAATACAC
CGGTGGAACGTTGTTCGGCTACAAGAAGAACACCGATATCGACGAGTTTG
AGCGTCGGGAGCAGCTTCGGAAGACATACAGAATTCCCGCAGAGCAGACC
CTTGCCGAATTGGGCGAGGGACGAGCCGCCATGGGAGGTACCTACGAATT
CGTGAAGACCGCATCCGCCAACCTTCGTGAGAAGGAAGACCACTGGAACG
TCGCTCTGGGAGGTTTCTTCTCCGGCGCCATCCTGGGTCTCCGAGATGGC
TCCGCACCACGAAGAGCACTACCATCCCAAGGATGCGATCGCGGCATCGA
TGAAGACCACTATGCTCACTGGTGGAGCGGGTCTTTTCGCCTCGGCCGTC
CAGAACACCCTCACCAGACAGAACGTCGGCCCGCTGGGCGTGTTCATCCG
GAGCGGTGGTACCGTCGGTATCTTCGGTATTTATGGCCCCGGATACGCCG
AGAGACGGGCGGAGAGAATCAAGGAGGCATACGGTATCGAGGTTCCCACA
ACGGCTCCGGCATCATGACTCGCACATTCCCCGCCCTCCTGGGCTACGGC
GTCGCTTTGGCCACCGCCACGGGCGCTTTCGAATACACCGGTGGAACGTT
GTTCGGCTACAAGAAGAACACCGATATCGACGAGTTTGAGCGTCGGGAGC
AGCTTCGGAAGACATACAGAATTCCCGCAGAGCAGACCCTTGCCGAATTG
GGCGAGGGACGAGCCGCCATGGGAGGTACCTACGAATTCGTGAAGACCGC
ATCCGCCAACCTTCGTGAGAAGGAAGACCACTGGAACGTCGCTCTGGGAG
GTTTCTTCTCCGGCGCCATCCTGGGTCTCCGAGATGGCTCCGCACCACGA
AGAGCACTACCATCCCAAGGATGCGATCGCGGCATCGATGAAGACCACTA
TGCTCACTGGTGGAGCGGGTCTTTTCGCCTCGGCCGTCCAGAACACCCTC
ACCAGACAGAACGTCGGCCCGCTGGGCGTGTTCATCCGGAGCGGTGGTAC
CGTCGGTATCTTCGGTATTTATGGCCCCGGATACGCCGAGAGACGGGCGG
AGAGAATCAAGGAGGCATACGGTATCGAGGTTCCCACAACGGCTCCGGCA
TCATGACTCGCACATTCCCCGCCCTCCTGGGCTACGGCGTCGCTTTGGCC
ACCGCCACGGGCGCTTTCGAATACACCGGTGGAACGTTGTTCGGCTACAA
GAAGAACACCGATATCGACGAGTTTGAGCGTCGGGAGCAGCTTCGGAAGA
CATACAGAATTCCCGCAGAGCAGACCCTTGCCGAATTGGGCGAGGGACGA
GCCGCCATGGGAGGTACCTACGAATTCGTGAAGACCGCATCCGCCAACCT
TCGTGAGAAGGAAGACCACTGGAACGTCGCTCTGGGAGGTTTCTTCTCCG
GCGCCATCCTGGGTCTCCGAGATGGCTCCGCACCACGAAGAGCACTACCA
TCCCAAGGATGCGATCGCGGCATCGATGAAGACCACTATGCTCACTGGTG
GAGCGGGTCTTTTCGCCTCGGCCGTCCAGAACACCCTCACCAGACAGAAC
GTCGGCCCGCTGGGCGTGTTCATCCGGAGCGGTGGTACCGTCGGTATCTT
CG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_010841ATCC10864_010841Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010841-T1ATCC10864_010841-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010841-T1.cdsATCC10864_010841-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010841-T1.exon4ATCC10864_010841-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_010841-T1.exon3ATCC10864_010841-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010841-T1.exon2ATCC10864_010841-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010841-T1.exon1ATCC10864_010841-T1.exon1Aspergillus niger ATCC 10864exon


Properties
Property NameValue
NoteantiSMASH:Cluster_1000246.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000246supercontigMCQH01000246:321917..322710 -
Powered by Drupal