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ATCC10864_010866-T1, ATCC10864_010866-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_010866-T1
Unique NameATCC10864_010866-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000246:396210..397001-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_010866-T1 ID=ATCC10864_010866-T1|Name=ATCC10864_010866-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=792bp|location=Sequence derived from alignment at MCQH01000246:396210..397001- (Aspergillus niger ATCC 10864)
ATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGACTTCAAGGTGTGTTT
ATGACGAGCATGGTTCTGAGCTCGCTTTCTATCCTACGTTTCTACCCTGT
CTTTATTTACTTTGCTCTTTTTTTTTTGTCCTTTTCCTCCTCCCCGTCTG
GTTTTTATACTTGAAGGGCACCTGAGATGTTCTGTCGTTGGATACGGTTA
GTGGTTGCGTGAGCTAACCTGACATTCTTTTACGCAGCGTATGCAAACTG
ACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGGCGGACAATGTCATGACC
TGGTAAGCTGATCCAGTCACACCTAATGTCGGCCTTTGAGTCCCTAACCT
TTGTTACGTCTAGGAACGCCGTCATCATCGGCCCCGCTGATACTCCCTTT
GAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGAGCAGTACCCAAA
CAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCCACCCCAACGTCT
ACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAACCGTTGGAGCCCA
ACCTATGACGTGGCAGCCATCCTGACCAGTATTCAGAGGTACGGACCCTT
GCAATCAGGGTAAAGCTGAAGAAAGATGAAACACGAAACATGCTAACGAG
TGTTTTACTGGCTTGTAGTCTGTTGAACGATCCCAACACATCATCTCCGG
CGAATGTAGAAGCGTCAAACCTTTACAAAGACAACCGGAAGGAGTACATC
AAGCGCGTGCGCGAGACCGTCGAGAAGAGCTGGGAGGACTAG
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Coding sequence (CDS) from alignment at MCQH01000246:396210..397001-

>ATCC10864_010866-T1 ID=ATCC10864_010866-T1|Name=ATCC10864_010866-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1824bp|location=Sequence derived from alignment at MCQH01000246:396210..397001- (Aspergillus niger ATCC 10864)
TCTGTTGAACGATCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAA
ACCTTTACAAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACC
GTCGAGAAGAGCTGGGAGGACTAGGAACGCCGTCATCATCGGCCCCGCTG
ATACTCCCTTTGAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGAG
CAGTACCCAAACAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCCA
CCCCAACGTCTACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAACC
GTTGGAGCCCAACCTATGACGTGGCAGCCATCCTGACCAGTATTCAGAGC
GTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGGCGGAC
AATGTCATGACCTGATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGAC
TTCAAGTCTGTTGAACGATCCCAACACATCATCTCCGGCGAATGTAGAAG
CGTCAAACCTTTACAAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGC
GAGACCGTCGAGAAGAGCTGGGAGGACTAGGAACGCCGTCATCATCGGCC
CCGCTGATACTCCCTTTGAAGATGGCACTTTCCGCCTTGTCATGCACTTC
GAGGAGCAGTACCCAAACAAGCCTCCGGGCGTCAAGTTTATCAGTCAGAT
GTTCCACCCCAACGTCTACGGTACGGGCGAGCTCTGTCTGGACATTCTAC
AGAACCGTTGGAGCCCAACCTATGACGTGGCAGCCATCCTGACCAGTATT
CAGAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTG
GCGGACAATGTCATGACCTGATGTCGACCTCTGCCCGCCGTCGTCTCATG
CGCGACTTCAAGTCTGTTGAACGATCCCAACACATCATCTCCGGCGAATG
TAGAAGCGTCAAACCTTTACAAAGACAACCGGAAGGAGTACATCAAGCGC
GTGCGCGAGACCGTCGAGAAGAGCTGGGAGGACTAGGAACGCCGTCATCA
TCGGCCCCGCTGATACTCCCTTTGAAGATGGCACTTTCCGCCTTGTCATG
CACTTCGAGGAGCAGTACCCAAACAAGCCTCCGGGCGTCAAGTTTATCAG
TCAGATGTTCCACCCCAACGTCTACGGTACGGGCGAGCTCTGTCTGGACA
TTCTACAGAACCGTTGGAGCCCAACCTATGACGTGGCAGCCATCCTGACC
AGTATTCAGAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCT
CCTGTGGCGGACAATGTCATGACCTGATGTCGACCTCTGCCCGCCGTCGT
CTCATGCGCGACTTCAAGTCTGTTGAACGATCCCAACACATCATCTCCGG
CGAATGTAGAAGCGTCAAACCTTTACAAAGACAACCGGAAGGAGTACATC
AAGCGCGTGCGCGAGACCGTCGAGAAGAGCTGGGAGGACTAGGAACGCCG
TCATCATCGGCCCCGCTGATACTCCCTTTGAAGATGGCACTTTCCGCCTT
GTCATGCACTTCGAGGAGCAGTACCCAAACAAGCCTCCGGGCGTCAAGTT
TATCAGTCAGATGTTCCACCCCAACGTCTACGGTACGGGCGAGCTCTGTC
TGGACATTCTACAGAACCGTTGGAGCCCAACCTATGACGTGGCAGCCATC
CTGACCAGTATTCAGAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCT
GCCTCTCCTGTGGCGGACAATGTCATGACCTGATGTCGACCTCTGCCCGC
CGTCGTCTCATGCGCGACTTCAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC2ATCC10864_010866Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010866-T1ATCC10864_010866-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010866-T1.cdsATCC10864_010866-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_010866-T1.exon4ATCC10864_010866-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_010866-T1.exon3ATCC10864_010866-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_010866-T1.exon2ATCC10864_010866-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_010866-T1.exon1ATCC10864_010866-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000608
InterProIPR023313
PFAMPF00179
InterProIPR016135
Properties
Property NameValue
ProductUbiquitin-conjugating enzyme E2 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000246supercontigMCQH01000246:396210..397001 -
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