You are here

Home

ATCC10864_011250-T1, ATCC10864_011250-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011250-T1
Unique NameATCC10864_011250-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000265:55177..56331+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011250-T1 ID=ATCC10864_011250-T1|Name=ATCC10864_011250-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1155bp|location=Sequence derived from alignment at MCQH01000265:55177..56331+ (Aspergillus niger ATCC 10864)
ATGCCCCGATACGCAGAAGACCACGACCGCTACGATGACAGCAACCGCGC
ATTTCTCCAAGCCTTCATGGCGCGGTCCACCATGACCTTTACACAAGCAA
AGCCCGTTCTGGCTGCTATATTCTCCATCAGAGGTAATCCTCTATACTCT
ACTCATACACCAAAACACCAAACTAAATCCGGATCAATATAGACGACGAA
CAAGTTTCCCCAGAAGACATAACGGAAGACGACCTCCAAACCTACATCGC
CGCCGCCAACAGCGCCATATCCCCCTTCGACCTCGAAATCCGGAGCATAC
TACCCCAGATTGAAATCAACAACAACAATGACCCTCCCCCAGCTCCGGAA
CGAGTCTACGCCCTCGTCAACACAACCAGCGACGCCCTCACCCAGCTCGC
AACAACATACTCCGCCGACGAAATCGCCTTCGTGAAGCGCATCCTCGACG
CCATGTTCGACACATACAATACCCGCCGCCAGGAAGCAATGGTCATAAGT
AGTATGCAGGCATTGCAGCTGGCCAAGGCTGGTGCAGGGGACGCAAATAG
ACGGGAGTCAGGAACACAGCAGCAAGCGACGCAGGGAGGCGCGGCACAGT
CGTTGACTATGACGCAGGCGGAGACGATGCTGAAGCAGCTTGTCGAGCAG
GGGTGGTTTGAGAAGAGCAGGAAGGGGTATTATCGGTTGAGTCCGCGCGG
GTTGATGGAGTTGAGGGGGTGGTTGGTGGCGGCGTATAATGATGAGGGGA
TTAGGAAGATTAAGTTCTGTGCTGCGTGTAGGGATATCATTACTGCTGTG
AGTTGGAGAGTATTCCTTGCTATGCGGGCTTGTTGGCTAATGATTCTGTG
ATTGTGTTTAGGGCCAACGATGCGGAGACCGCGATTGTACCGGACGATTG
CACGATCACTGCATGCGGAATTTCTTTCGTATGCAACAGGCTGAAAGCTG
TCCTGTGTGCAAGAGTGCGTGGCCGGGTGATCGATTCGTTGGTGAGCGCG
CGATTACTATGTCTGATCCGGCTGCACAGAGGGCTAGACGGTCGGCTGCG
AATACTCAGCAGGCCGAAGCTGGGCCTAGTACGCAGTTCACGTTGCCGGA
ACTGGATGTTGAAGATGAAGCGGATGGTGGTGAGGAAGAGGCTGGGAGTG
ATTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000265:55177..56331+

>ATCC10864_011250-T1 ID=ATCC10864_011250-T1|Name=ATCC10864_011250-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3096bp|location=Sequence derived from alignment at MCQH01000265:55177..56331+ (Aspergillus niger ATCC 10864)
ATGCCCCGATACGCAGAAGACCACGACCGCTACGATGACAGCAACCGCGC
ATTTCTCCAAGCCTTCATGGCGCGGTCCACCATGACCTTTACACAAGCAA
AGCCCGTTCTGGCTGCTATATTCTCCATCAGAGACGACGAACAAGTTTCC
CCAGAAGACATAACGGAAGACGACCTCCAAACCTACATCGCCGCCGCCAA
CAGCGCCATATCCCCCTTCGACCTCGAAATCCGGAGCATACTACCCCAGA
TTGAAATCAACAACAACAATGACCCTCCCCCAGCTCCGGAACGAGTCTAC
GCCCTCGTCAACACAACCAGCGACGCCCTCACCCAGCTCGCAACAACATA
CTCCGCCGACGAAATCGCCTTCGTGAAGCGCATCCTCGACGCCATGTTCG
ACACATACAATACCCGCCGCCAGGAAGCAATGGTCATAAGTAGTATGCAG
GCATTGCAGCTGGCCAAGGCTGGTGCAGGGGACGCAAATAGACGGGAGTC
AGGAACACAGCAGCAAGCGACGCAGGGAGGCGCGGCACAGTCGTTGACTA
TGACGCAGGCGGAGACGATGCTGAAGCAGCTTGTCGAGCAGGGGTGGTTT
GAGAAGAGCAGGAAGGGGTATTATCGGTTGAGTCCGCGCGGGTTGATGGA
GTTGAGGGGGTGGTTGGTGGCGGCGTATAATGATGAGGGGATTAGGAAGA
TTAAGTTCTGTGCTGCGTGTAGGGATATCATTACTGCTGGCCAACGATGC
GGAGACCGCGATTGTACCGGACGATTGCACGATCACTGCATGCGGAATTT
CTTTCGTATGCAACAGGCTGAAAGCTGTCCTGTGTGCAAGAGTGCGTGGC
CGGGTGATCGATTCGTTGGTGAGCGCGCGATTACTATGTCTGATCCGGCT
GCACAGAGGGCTAGACGGTCGGCTGCGAATACTCAGCAGGCCGAAGCTGG
GCCTAGTACGCAGTTCACGTTGCCGGAACTGGATGTTGAAGATGAAGCGG
ATGGTGGTGAGGAAGAGGCTGGGAGTGATTGAATGCCCCGATACGCAGAA
GACCACGACCGCTACGATGACAGCAACCGCGCATTTCTCCAAGCCTTCAT
GGCGCGGTCCACCATGACCTTTACACAAGCAAAGCCCGTTCTGGCTGCTA
TATTCTCCATCAGAGACGACGAACAAGTTTCCCCAGAAGACATAACGGAA
GACGACCTCCAAACCTACATCGCCGCCGCCAACAGCGCCATATCCCCCTT
CGACCTCGAAATCCGGAGCATACTACCCCAGATTGAAATCAACAACAACA
ATGACCCTCCCCCAGCTCCGGAACGAGTCTACGCCCTCGTCAACACAACC
AGCGACGCCCTCACCCAGCTCGCAACAACATACTCCGCCGACGAAATCGC
CTTCGTGAAGCGCATCCTCGACGCCATGTTCGACACATACAATACCCGCC
GCCAGGAAGCAATGGTCATAAGTAGTATGCAGGCATTGCAGCTGGCCAAG
GCTGGTGCAGGGGACGCAAATAGACGGGAGTCAGGAACACAGCAGCAAGC
GACGCAGGGAGGCGCGGCACAGTCGTTGACTATGACGCAGGCGGAGACGA
TGCTGAAGCAGCTTGTCGAGCAGGGGTGGTTTGAGAAGAGCAGGAAGGGG
TATTATCGGTTGAGTCCGCGCGGGTTGATGGAGTTGAGGGGGTGGTTGGT
GGCGGCGTATAATGATGAGGGGATTAGGAAGATTAAGTTCTGTGCTGCGT
GTAGGGATATCATTACTGCTGGCCAACGATGCGGAGACCGCGATTGTACC
GGACGATTGCACGATCACTGCATGCGGAATTTCTTTCGTATGCAACAGGC
TGAAAGCTGTCCTGTGTGCAAGAGTGCGTGGCCGGGTGATCGATTCGTTG
GTGAGCGCGCGATTACTATGTCTGATCCGGCTGCACAGAGGGCTAGACGG
TCGGCTGCGAATACTCAGCAGGCCGAAGCTGGGCCTAGTACGCAGTTCAC
GTTGCCGGAACTGGATGTTGAAGATGAAGCGGATGGTGGTGAGGAAGAGG
CTGGGAGTGATTGAATGCCCCGATACGCAGAAGACCACGACCGCTACGAT
GACAGCAACCGCGCATTTCTCCAAGCCTTCATGGCGCGGTCCACCATGAC
CTTTACACAAGCAAAGCCCGTTCTGGCTGCTATATTCTCCATCAGAGACG
ACGAACAAGTTTCCCCAGAAGACATAACGGAAGACGACCTCCAAACCTAC
ATCGCCGCCGCCAACAGCGCCATATCCCCCTTCGACCTCGAAATCCGGAG
CATACTACCCCAGATTGAAATCAACAACAACAATGACCCTCCCCCAGCTC
CGGAACGAGTCTACGCCCTCGTCAACACAACCAGCGACGCCCTCACCCAG
CTCGCAACAACATACTCCGCCGACGAAATCGCCTTCGTGAAGCGCATCCT
CGACGCCATGTTCGACACATACAATACCCGCCGCCAGGAAGCAATGGTCA
TAAGTAGTATGCAGGCATTGCAGCTGGCCAAGGCTGGTGCAGGGGACGCA
AATAGACGGGAGTCAGGAACACAGCAGCAAGCGACGCAGGGAGGCGCGGC
ACAGTCGTTGACTATGACGCAGGCGGAGACGATGCTGAAGCAGCTTGTCG
AGCAGGGGTGGTTTGAGAAGAGCAGGAAGGGGTATTATCGGTTGAGTCCG
CGCGGGTTGATGGAGTTGAGGGGGTGGTTGGTGGCGGCGTATAATGATGA
GGGGATTAGGAAGATTAAGTTCTGTGCTGCGTGTAGGGATATCATTACTG
CTGGCCAACGATGCGGAGACCGCGATTGTACCGGACGATTGCACGATCAC
TGCATGCGGAATTTCTTTCGTATGCAACAGGCTGAAAGCTGTCCTGTGTG
CAAGAGTGCGTGGCCGGGTGATCGATTCGTTGGTGAGCGCGCGATTACTA
TGTCTGATCCGGCTGCACAGAGGGCTAGACGGTCGGCTGCGAATACTCAG
CAGGCCGAAGCTGGGCCTAGTACGCAGTTCACGTTGCCGGAACTGGATGT
TGAAGATGAAGCGGATGGTGGTGAGGAAGAGGCTGGGAGTGATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Cellular Component
TermDefinition
GO:0030915Smc5-Smc6 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_011250ATCC10864_011250Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011250-T1.exon1ATCC10864_011250-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_011250-T1.exon2ATCC10864_011250-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011250-T1.exon3ATCC10864_011250-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011250-T1.cdsATCC10864_011250-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011250-T1ATCC10864_011250-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001841
PFAMPF07574
PFAMPF08746
InterProIPR036388
InterProIPR014857
InterProIPR013083
InterProIPR011513
Properties
Property NameValue
NoteantiSMASH:Cluster_1000265.1
NoteBUSCO:EOG092645L9
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000265supercontigMCQH01000265:55177..56331 +
Powered by Drupal