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ATCC10864_011293-T1, ATCC10864_011293-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011293-T1
Unique NameATCC10864_011293-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000270:30419..31565-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011293-T1 ID=ATCC10864_011293-T1|Name=ATCC10864_011293-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1147bp|location=Sequence derived from alignment at MCQH01000270:30419..31565- (Aspergillus niger ATCC 10864)
ATGTCTGCGAGAGGGTGAGTTGTTTCTTTTCGTTGTTGGAGACGTGTGGG
AAAGCGAGACAGAGAAAGAGAGGAAGAAATCCGGACCGGAGATATTGAAA
TGCTGCGGGAAAGAGATGAGATGAGAAGGGATGGAATGGAATATTCGCTG
GCTGGAGATTTCGACTCGAAATTACGGTTGGATTGAGTTCGATATGCGAC
ATACGAGATTGAAAGAGGAGGGTTGAATGAAGGTCCGGGAAAGAGATGGA
TAAATCTATGTGGATGGGAATTTGATATACATGGGATACGAGGGAATTAA
AGCTAACAAAATATCTATAACAGACGCGGTGGTGCCTCCGGCAACAAGCT
CAAGATGACCCTCGGTCTGCCTTGGTATGTCAACTCCAAATTTCTTCCGT
TCAAATCCATACACCCATCTTCGAGAGAATTATGCGATTCGATACAATTA
AATCAAATCAAATCGATCTCAATTATTCTTCAATCGAAACATACACCCAC
CACACACAAGCCACCTCGATATCTTCCCACCCAACACCCATGATTTCACA
ACCTACAACCGACACGAACACATGAAGAAAAAAATGATGAACACAGCTAA
TTAATCTTTTTGCCTACAGCGGCGCCGTGCTCAACTGCTGCGACAACTCC
GGTGCCCGCAACCTGTACATCATCTCCGTCAAGGGTATCGGTGCTCGCCT
GAACCGTCTCCCCGCTGCCGGTGTCGGTGACATGGTCATGGCCACCGTCA
AGAAGGGAAAGCCTGAGCTCCGTAAGAAGGTCATGCCCGCTGTTGTTGTC
CGTCAGAGCAAGCCCTGGAGACGCCCCGACGGTATCTACCTCTACTTCGA
GGACAACGCTGGTGTTGTACGTACCCTTGTCCCCGAATTCCAATTCCACT
CTTTATATCAAGTGGATGAGGGTCATATGCGACAATAATGATGGAAATAC
TAATGATCGGTATAGATCGTCAACGCCAAGGGTGAGATGAAGGGTTCCGC
TATCACTGGTCCCGTTGGTAAGGAGGCTGCTGAGCTTTGGCCTGTAAGTT
CTCCCTAGCATACCTCAACGGGTATATATCAATGGGGAGATTCATATGCT
AATTGTGTGTCCAGCGTATTGCCTCCAACTCCGGTGTTGTCATGTAA
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Coding sequence (CDS) from alignment at MCQH01000270:30419..31565-

>ATCC10864_011293-T1 ID=ATCC10864_011293-T1|Name=ATCC10864_011293-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2115bp|location=Sequence derived from alignment at MCQH01000270:30419..31565- (Aspergillus niger ATCC 10864)
CGTATTGCCTCCAACTCCGGTGTTGTCATGTAAATCGTCAACGCCAAGGG
TGAGATGAAGGGTTCCGCTATCACTGGTCCCGTTGGTAAGGAGGCTGCTG
AGCTTTGGCCTCGGCGCCGTGCTCAACTGCTGCGACAACTCCGGTGCCCG
CAACCTGTACATCATCTCCGTCAAGGGTATCGGTGCTCGCCTGAACCGTC
TCCCCGCTGCCGGTGTCGGTGACATGGTCATGGCCACCGTCAAGAAGGGA
AAGCCTGAGCTCCGTAAGAAGGTCATGCCCGCTGTTGTTGTCCGTCAGAG
CAAGCCCTGGAGACGCCCCGACGGTATCTACCTCTACTTCGAGGACAACG
CTGGTGTTACGCGGTGGTGCCTCCGGCAACAAGCTCAAGATGACCCTCGG
TCTGCCTTGATGTCTGCGAGAGGCGTATTGCCTCCAACTCCGGTGTTGTC
ATGTAAATCGTCAACGCCAAGGGTGAGATGAAGGGTTCCGCTATCACTGG
TCCCGTTGGTAAGGAGGCTGCTGAGCTTTGGCCTCGGCGCCGTGCTCAAC
TGCTGCGACAACTCCGGTGCCCGCAACCTGTACATCATCTCCGTCAAGGG
TATCGGTGCTCGCCTGAACCGTCTCCCCGCTGCCGGTGTCGGTGACATGG
TCATGGCCACCGTCAAGAAGGGAAAGCCTGAGCTCCGTAAGAAGGTCATG
CCCGCTGTTGTTGTCCGTCAGAGCAAGCCCTGGAGACGCCCCGACGGTAT
CTACCTCTACTTCGAGGACAACGCTGGTGTTACGCGGTGGTGCCTCCGGC
AACAAGCTCAAGATGACCCTCGGTCTGCCTTGATGTCTGCGAGAGGCGTA
TTGCCTCCAACTCCGGTGTTGTCATGTAAATCGTCAACGCCAAGGGTGAG
ATGAAGGGTTCCGCTATCACTGGTCCCGTTGGTAAGGAGGCTGCTGAGCT
TTGGCCTCGGCGCCGTGCTCAACTGCTGCGACAACTCCGGTGCCCGCAAC
CTGTACATCATCTCCGTCAAGGGTATCGGTGCTCGCCTGAACCGTCTCCC
CGCTGCCGGTGTCGGTGACATGGTCATGGCCACCGTCAAGAAGGGAAAGC
CTGAGCTCCGTAAGAAGGTCATGCCCGCTGTTGTTGTCCGTCAGAGCAAG
CCCTGGAGACGCCCCGACGGTATCTACCTCTACTTCGAGGACAACGCTGG
TGTTACGCGGTGGTGCCTCCGGCAACAAGCTCAAGATGACCCTCGGTCTG
CCTTGATGTCTGCGAGAGGCGTATTGCCTCCAACTCCGGTGTTGTCATGT
AAATCGTCAACGCCAAGGGTGAGATGAAGGGTTCCGCTATCACTGGTCCC
GTTGGTAAGGAGGCTGCTGAGCTTTGGCCTCGGCGCCGTGCTCAACTGCT
GCGACAACTCCGGTGCCCGCAACCTGTACATCATCTCCGTCAAGGGTATC
GGTGCTCGCCTGAACCGTCTCCCCGCTGCCGGTGTCGGTGACATGGTCAT
GGCCACCGTCAAGAAGGGAAAGCCTGAGCTCCGTAAGAAGGTCATGCCCG
CTGTTGTTGTCCGTCAGAGCAAGCCCTGGAGACGCCCCGACGGTATCTAC
CTCTACTTCGAGGACAACGCTGGTGTTACGCGGTGGTGCCTCCGGCAACA
AGCTCAAGATGACCCTCGGTCTGCCTTGATGTCTGCGAGAGGCGTATTGC
CTCCAACTCCGGTGTTGTCATGTAAATCGTCAACGCCAAGGGTGAGATGA
AGGGTTCCGCTATCACTGGTCCCGTTGGTAAGGAGGCTGCTGAGCTTTGG
CCTCGGCGCCGTGCTCAACTGCTGCGACAACTCCGGTGCCCGCAACCTGT
ACATCATCTCCGTCAAGGGTATCGGTGCTCGCCTGAACCGTCTCCCCGCT
GCCGGTGTCGGTGACATGGTCATGGCCACCGTCAAGAAGGGAAAGCCTGA
GCTCCGTAAGAAGGTCATGCCCGCTGTTGTTGTCCGTCAGAGCAAGCCCT
GGAGACGCCCCGACGGTATCTACCTCTACTTCGAGGACAACGCTGGTGTT
ACGCGGTGGTGCCTCCGGCAACAAGCTCAAGATGACCCTCGGTCTGCCTT
GATGTCTGCGAGAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL23ATCC10864_011293Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011293-T1ATCC10864_011293-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011293-T1.cdsATCC10864_011293-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011293-T1.exon5ATCC10864_011293-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_011293-T1.exon4ATCC10864_011293-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_011293-T1.exon3ATCC10864_011293-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_011293-T1.exon2ATCC10864_011293-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_011293-T1.exon1ATCC10864_011293-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00238
InterProIPR000218
InterProIPR019972
InterProIPR036853
Properties
Property NameValue
NoteBUSCO:EOG09265CQO
Product60S ribosomal protein L23
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000270supercontigMCQH01000270:30419..31565 -
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