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ATCC10864_011507-T1, ATCC10864_011507-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_011507-T1
Unique NameATCC10864_011507-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000282:561899..563260+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_011507-T1 ID=ATCC10864_011507-T1|Name=ATCC10864_011507-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1362bp|location=Sequence derived from alignment at MCQH01000282:561899..563260+ (Aspergillus niger ATCC 10864)
ATGGACGTCGTTCCCTCTACCACACCCGACGAGGCAGTGCGCCTCTCCGC
CAAGCGGACGGCCGAGCTCTTCGGTTCTGACTACCTAATGGTCACCCCGT
CCGTCGCCAATGGCTCCATCGCCACGTCCTACCGGCGCAAAGCAGAATAC
GAAGATGTGAAGGAACTCCCCCCAGCGCTCGCCGAAAAGCAAGCCAAAGC
CGTGGCCGCTGGACGCGCCAAACGCCCCAAGATCCAACCACAGGCCCAAG
CCGCCGTGGACGGCAGCGGCGCGTCCATGGCCCTCGTCAAGAAGGCCCCC
GGCCCAGCAGCCGGCGGCGTCGGCGGTGAAAACGCTCCCAAGAGTCTCAT
CCAACGTCCCTCGGCCACGAAACAGCAACGACCCGACTGGCACCCGCCAT
GGAAGCTCATGCGGGTCATCTCCGGCCACTTGGGTTGGGTGCGCAGTTTG
GCCGTCGAGCCCAACAACGAGTGGTTTGCTAGTGGTGCAGGCGATCGGAC
CATCAAGATCTGGAATCTGGCTACAGGTGCCCTCCGTCTCACTCTCACGG
GTCACATTTCCACTGTCCGCGGCTTGGCCGTGTCCCCCCGACATCCGTAC
CTCTTCTCCTGCGGTGAAGACAAAATGGTCAAGTGCTGGGATCTCGAAAC
CAACAAAGTCATCCGTCACTACCACGGCCACCTCAGCGGCGTCTACACCC
TCGACCTCCACCCCCGTCTCGACCTCCTCGTCACAGGTGGTCGTGACGGC
GTAGCCCGCGTCTGGGACATGCGCACTCGCGCCAACGTCCACGTCCTCGC
CGGCCACAAGGGCACCGTCGCCGACGTCAAATGCCAGGAAGCCGACCCGC
AGATCATCTCCGGCTCCCTGGACGCCACCGTCCGCCTCTGGGATCTCGCA
GCCGGTAAATCCATGGGCGTGCTCACGCACCACAAGAAGGGTGTGCGCGC
TCTGGCCACTCATCCCCGCGAATTCACCTTCGCCTCCGCCAGCACCGGCT
CCATTAAGCAATGGAAGTGCCCTGAGGGCGACTTCATGCAGAACTTCGAT
GGTCAAAACGCTATCATCAACACCCTCTCCGTCAACGAAGACAACGTCAT
GTTCTCCGGCGGTGATAACGGCTCCATGTGCTTCTGGGATTGGAAGACCG
GGTACCAGTTCCAGAGCATCGATGCTGTCGCTCAGCCGGGTTCTCTGGAA
GCTGAGGCGGGTATTATGGCTTCGACGTTTGATCGTACTGGTTTGCGTCT
TATTACTGGTGAGGCTGACAAGACTATTAAGATTTGGAAGCCGGATGATG
AGGCCACCGAGGAATCGCACCCTATTACTTGGGCCCCCACCTTGGGGAGA
CAGAGGTATTAG
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Coding sequence (CDS) from alignment at MCQH01000282:561899..563260+

>ATCC10864_011507-T1 ID=ATCC10864_011507-T1|Name=ATCC10864_011507-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1362bp|location=Sequence derived from alignment at MCQH01000282:561899..563260+ (Aspergillus niger ATCC 10864)
ATGGACGTCGTTCCCTCTACCACACCCGACGAGGCAGTGCGCCTCTCCGC
CAAGCGGACGGCCGAGCTCTTCGGTTCTGACTACCTAATGGTCACCCCGT
CCGTCGCCAATGGCTCCATCGCCACGTCCTACCGGCGCAAAGCAGAATAC
GAAGATGTGAAGGAACTCCCCCCAGCGCTCGCCGAAAAGCAAGCCAAAGC
CGTGGCCGCTGGACGCGCCAAACGCCCCAAGATCCAACCACAGGCCCAAG
CCGCCGTGGACGGCAGCGGCGCGTCCATGGCCCTCGTCAAGAAGGCCCCC
GGCCCAGCAGCCGGCGGCGTCGGCGGTGAAAACGCTCCCAAGAGTCTCAT
CCAACGTCCCTCGGCCACGAAACAGCAACGACCCGACTGGCACCCGCCAT
GGAAGCTCATGCGGGTCATCTCCGGCCACTTGGGTTGGGTGCGCAGTTTG
GCCGTCGAGCCCAACAACGAGTGGTTTGCTAGTGGTGCAGGCGATCGGAC
CATCAAGATCTGGAATCTGGCTACAGGTGCCCTCCGTCTCACTCTCACGG
GTCACATTTCCACTGTCCGCGGCTTGGCCGTGTCCCCCCGACATCCGTAC
CTCTTCTCCTGCGGTGAAGACAAAATGGTCAAGTGCTGGGATCTCGAAAC
CAACAAAGTCATCCGTCACTACCACGGCCACCTCAGCGGCGTCTACACCC
TCGACCTCCACCCCCGTCTCGACCTCCTCGTCACAGGTGGTCGTGACGGC
GTAGCCCGCGTCTGGGACATGCGCACTCGCGCCAACGTCCACGTCCTCGC
CGGCCACAAGGGCACCGTCGCCGACGTCAAATGCCAGGAAGCCGACCCGC
AGATCATCTCCGGCTCCCTGGACGCCACCGTCCGCCTCTGGGATCTCGCA
GCCGGTAAATCCATGGGCGTGCTCACGCACCACAAGAAGGGTGTGCGCGC
TCTGGCCACTCATCCCCGCGAATTCACCTTCGCCTCCGCCAGCACCGGCT
CCATTAAGCAATGGAAGTGCCCTGAGGGCGACTTCATGCAGAACTTCGAT
GGTCAAAACGCTATCATCAACACCCTCTCCGTCAACGAAGACAACGTCAT
GTTCTCCGGCGGTGATAACGGCTCCATGTGCTTCTGGGATTGGAAGACCG
GGTACCAGTTCCAGAGCATCGATGCTGTCGCTCAGCCGGGTTCTCTGGAA
GCTGAGGCGGGTATTATGGCTTCGACGTTTGATCGTACTGGTTTGCGTCT
TATTACTGGTGAGGCTGACAAGACTATTAAGATTTGGAAGCCGGATGATG
AGGCCACCGAGGAATCGCACCCTATTACTTGGGCCCCCACCTTGGGGAGA
CAGAGGTATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRP46ATCC10864_011507Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011507-T1.exon1ATCC10864_011507-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011507-T1.cdsATCC10864_011507-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_011507-T1ATCC10864_011507-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR017986
InterProIPR019775
InterProIPR001680
InterProIPR036322
InterProIPR020472
PFAMPF00400
Properties
Property NameValue
NoteBUSCO:EOG09262KUJ
Productpre-mRNA-splicing factor prp46
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000282supercontigMCQH01000282:561899..563260 +
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