You are here

Home

ATCC64974_640-T1, ATCC64974_640-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_640-T1
Unique NameATCC64974_640-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:232191..233521-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_640-T1 ID=ATCC64974_640-T1|Name=ATCC64974_640-T1|organism=Aspergillus niger N402|type=mRNA|length=1331bp|location=Sequence derived from alignment at OGUI01000001.1:232191..233521- (Aspergillus niger N402)
ATGGCCATTCATCCGAATTTCCCATCTGAAGTGAACCCGAGAGGATCCCT
CTCACCACAGCAGGCTCGCGCTATCTCCGTCTGGACTGAACAGGCAGCTG
CATCCTTGGAGAGTCTGACTCTCTCCGAGTCAGTGCCGGTCGCCGATTCC
AATGTGGCCTTTGCCCAGTCCACTCCTACGCGCGCAGGCGTTCGCGGCAC
CACAGTCTCGTTATCAATTCCCTTAGATGACCCAGTCCCGACAGCGGGAA
GCCCTTCCGCGCCTAAGGTCAAGGTCTTAGGCCAGCCAACCAAGGAGACT
CAGGTGGCGTCGGTGACCTTTCGGCGCCGCGAGCCGATTCGCCGTGATAG
TCTCAAGAGGCGCGAAGCCTTGTTGAAGGGAAAGGATGGTAGTCGTCGCA
GGCAGCGTTGGGAGAATGGTATGTCTTGACATATCGGATACACGCCAGTG
GCTGGGCTTCCGCGCTTTTCCTGGGCCGGACGTGCCTTATCATTGCACTC
GATAGATGCTGACAGAATGTGCTTTCTTGCAAAGATCGTCTTCTGAACAA
TCCGTGGGCCGAGCCGCCATCCTCAAAGGATTGGGATATCCAAGCCACTC
ACACTCGTCACGACCCTTTGCCTTACTACCTTGCACCTCTCTGGGACAAT
CACTATGCGCATCTGGACCATAGGTCATCCCAGCAGATGGAGACACGGAC
CGAGAAGCATCGTGTTCCTAAGGAGCTGCGACAGAGACTAAAGCATGCAC
GTGCAGCACGCGGTATACTTCAAGATATCGAAGAGGACATCAGACAATTC
ATCCAGCGATGGAACGAGAAGCAAAGTTTACTGAAGCAGGAGGGTCTGGC
AGATGCCCCGCAATCATCCGACAGTGAATCTGAAGATGAGATCGTGTTTG
TGGGTCGAAACGGCCTGATGCACGACTCGCCTCAGAGAAGAGCAAGACTC
CAAAAGATGCGTGAGGCAATGAGTGCTCATCATGAGCATGATGGGCAGAA
GATGGTGTTTGAGAGCCTGGTTGACGACCGGGCAGCTGGATTCGGGTAAG
TGTAGACTCACCTATTCAAATCGCCGATCCATGCTTACCATAATGTTCTC
ACCTTCAGTCGCTGGCTCGTCCATTCCATCGCGTCGTATTATGGCCTGCA
CACTTGGTCTGTCACCGTCGGGGAACCTGCCCGCCGCGAGGCTTACGTTG
GCTTCTATCCGCCAGCCCCAAGCAGTCGAGCAGGACCCATATCCCCACCG
GCCGGATCGAAGGCTTGCCGTCAGGAAGCGATGATACAGCCCGGCGACGA
ACTGCCTCAACCGCTCTGGACGCAGGTTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:232191..233521-

>ATCC64974_640-T1 ID=ATCC64974_640-T1|Name=ATCC64974_640-T1|organism=Aspergillus niger N402|type=CDS|length=3456bp|location=Sequence derived from alignment at OGUI01000001.1:232191..233521- (Aspergillus niger N402)
TCGCTGGCTCGTCCATTCCATCGCGTCGTATTATGGCCTGCACACTTGGT
CTGTCACCGTCGGGGAACCTGCCCGCCGCGAGGCTTACGTTGGCTTCTAT
CCGCCAGCCCCAAGCAGTCGAGCAGGACCCATATCCCCACCGGCCGGATC
GAAGGCTTGCCGTCAGGAAGCGATGATACAGCCCGGCGACGAACTGCCTC
AACCGCTCTGGACGCAGGTTTGAATCGTCTTCTGAACAATCCGTGGGCCG
AGCCGCCATCCTCAAAGGATTGGGATATCCAAGCCACTCACACTCGTCAC
GACCCTTTGCCTTACTACCTTGCACCTCTCTGGGACAATCACTATGCGCA
TCTGGACCATAGGTCATCCCAGCAGATGGAGACACGGACCGAGAAGCATC
GTGTTCCTAAGGAGCTGCGACAGAGACTAAAGCATGCACGTGCAGCACGC
GGTATACTTCAAGATATCGAAGAGGACATCAGACAATTCATCCAGCGATG
GAACGAGAAGCAAAGTTTACTGAAGCAGGAGGGTCTGGCAGATGCCCCGC
AATCATCCGACAGTGAATCTGAAGATGAGATCGTGTTTGTGGGTCGAAAC
GGCCTGATGCACGACTCGCCTCAGAGAAGAGCAAGACTCCAAAAGATGCG
TGAGGCAATGAGTGCTCATCATGAGCATGATGGGCAGAAGATGGTGTTTG
AGAGCCTGGTTGACGACCGGGCAGCTGGATTCGGATGGCCATTCATCCGA
ATTTCCCATCTGAAGTGAACCCGAGAGGATCCCTCTCACCACAGCAGGCT
CGCGCTATCTCCGTCTGGACTGAACAGGCAGCTGCATCCTTGGAGAGTCT
GACTCTCTCCGAGTCAGTGCCGGTCGCCGATTCCAATGTGGCCTTTGCCC
AGTCCACTCCTACGCGCGCAGGCGTTCGCGGCACCACAGTCTCGTTATCA
ATTCCCTTAGATGACCCAGTCCCGACAGCGGGAAGCCCTTCCGCGCCTAA
GGTCAAGGTCTTAGGCCAGCCAACCAAGGAGACTCAGGTGGCGTCGGTGA
CCTTTCGGCGCCGCGAGCCGATTCGCCGTGATAGTCTCAAGAGGCGCGAA
GCCTTGTTGAAGGGAAAGGATGGTAGTCGTCGCAGGCAGCGTTGGGAGAA
TGTCGCTGGCTCGTCCATTCCATCGCGTCGTATTATGGCCTGCACACTTG
GTCTGTCACCGTCGGGGAACCTGCCCGCCGCGAGGCTTACGTTGGCTTCT
ATCCGCCAGCCCCAAGCAGTCGAGCAGGACCCATATCCCCACCGGCCGGA
TCGAAGGCTTGCCGTCAGGAAGCGATGATACAGCCCGGCGACGAACTGCC
TCAACCGCTCTGGACGCAGGTTTGAATCGTCTTCTGAACAATCCGTGGGC
CGAGCCGCCATCCTCAAAGGATTGGGATATCCAAGCCACTCACACTCGTC
ACGACCCTTTGCCTTACTACCTTGCACCTCTCTGGGACAATCACTATGCG
CATCTGGACCATAGGTCATCCCAGCAGATGGAGACACGGACCGAGAAGCA
TCGTGTTCCTAAGGAGCTGCGACAGAGACTAAAGCATGCACGTGCAGCAC
GCGGTATACTTCAAGATATCGAAGAGGACATCAGACAATTCATCCAGCGA
TGGAACGAGAAGCAAAGTTTACTGAAGCAGGAGGGTCTGGCAGATGCCCC
GCAATCATCCGACAGTGAATCTGAAGATGAGATCGTGTTTGTGGGTCGAA
ACGGCCTGATGCACGACTCGCCTCAGAGAAGAGCAAGACTCCAAAAGATG
CGTGAGGCAATGAGTGCTCATCATGAGCATGATGGGCAGAAGATGGTGTT
TGAGAGCCTGGTTGACGACCGGGCAGCTGGATTCGGATGGCCATTCATCC
GAATTTCCCATCTGAAGTGAACCCGAGAGGATCCCTCTCACCACAGCAGG
CTCGCGCTATCTCCGTCTGGACTGAACAGGCAGCTGCATCCTTGGAGAGT
CTGACTCTCTCCGAGTCAGTGCCGGTCGCCGATTCCAATGTGGCCTTTGC
CCAGTCCACTCCTACGCGCGCAGGCGTTCGCGGCACCACAGTCTCGTTAT
CAATTCCCTTAGATGACCCAGTCCCGACAGCGGGAAGCCCTTCCGCGCCT
AAGGTCAAGGTCTTAGGCCAGCCAACCAAGGAGACTCAGGTGGCGTCGGT
GACCTTTCGGCGCCGCGAGCCGATTCGCCGTGATAGTCTCAAGAGGCGCG
AAGCCTTGTTGAAGGGAAAGGATGGTAGTCGTCGCAGGCAGCGTTGGGAG
AATGTCGCTGGCTCGTCCATTCCATCGCGTCGTATTATGGCCTGCACACT
TGGTCTGTCACCGTCGGGGAACCTGCCCGCCGCGAGGCTTACGTTGGCTT
CTATCCGCCAGCCCCAAGCAGTCGAGCAGGACCCATATCCCCACCGGCCG
GATCGAAGGCTTGCCGTCAGGAAGCGATGATACAGCCCGGCGACGAACTG
CCTCAACCGCTCTGGACGCAGGTTTGAATCGTCTTCTGAACAATCCGTGG
GCCGAGCCGCCATCCTCAAAGGATTGGGATATCCAAGCCACTCACACTCG
TCACGACCCTTTGCCTTACTACCTTGCACCTCTCTGGGACAATCACTATG
CGCATCTGGACCATAGGTCATCCCAGCAGATGGAGACACGGACCGAGAAG
CATCGTGTTCCTAAGGAGCTGCGACAGAGACTAAAGCATGCACGTGCAGC
ACGCGGTATACTTCAAGATATCGAAGAGGACATCAGACAATTCATCCAGC
GATGGAACGAGAAGCAAAGTTTACTGAAGCAGGAGGGTCTGGCAGATGCC
CCGCAATCATCCGACAGTGAATCTGAAGATGAGATCGTGTTTGTGGGTCG
AAACGGCCTGATGCACGACTCGCCTCAGAGAAGAGCAAGACTCCAAAAGA
TGCGTGAGGCAATGAGTGCTCATCATGAGCATGATGGGCAGAAGATGGTG
TTTGAGAGCCTGGTTGACGACCGGGCAGCTGGATTCGGATGGCCATTCAT
CCGAATTTCCCATCTGAAGTGAACCCGAGAGGATCCCTCTCACCACAGCA
GGCTCGCGCTATCTCCGTCTGGACTGAACAGGCAGCTGCATCCTTGGAGA
GTCTGACTCTCTCCGAGTCAGTGCCGGTCGCCGATTCCAATGTGGCCTTT
GCCCAGTCCACTCCTACGCGCGCAGGCGTTCGCGGCACCACAGTCTCGTT
ATCAATTCCCTTAGATGACCCAGTCCCGACAGCGGGAAGCCCTTCCGCGC
CTAAGGTCAAGGTCTTAGGCCAGCCAACCAAGGAGACTCAGGTGGCGTCG
GTGACCTTTCGGCGCCGCGAGCCGATTCGCCGTGATAGTCTCAAGAGGCG
CGAAGCCTTGTTGAAGGGAAAGGATGGTAGTCGTCGCAGGCAGCGTTGGG
AGAATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_640ATCC64974_640Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_640-T1ATCC64974_640-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_640-T1.cdsATCC64974_640-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_640-T1.exon3ATCC64974_640-T1.exon3Aspergillus niger N402exon
ATCC64974_640-T1.exon2ATCC64974_640-T1.exon2Aspergillus niger N402exon
ATCC64974_640-T1.exon1ATCC64974_640-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036867
DBxrefInterPro:IPR025952
DBxrefPFAM:PF13902
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:232191..233521 -
Powered by Drupal