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ATCC64974_5120-T1, ATCC64974_5120-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_5120-T1
Unique NameATCC64974_5120-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1558881..1559837-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_5120-T1 ID=ATCC64974_5120-T1|Name=ATCC64974_5120-T1|organism=Aspergillus niger N402|type=mRNA|length=957bp|location=Sequence derived from alignment at OGUI01000001.1:1558881..1559837- (Aspergillus niger N402)
ATGCCTGGAAGTGACGCTCTTCGCGCACTCAAGTTGCTCTCTCGCAGCTC
CGGGGGTCTCCTCTCGGGCGCTGAGACGACCACGGTAAGACCGACGTTTT
TCGATTCCGCTGCTAGTCTTTTGCACATGGCCGAATGCAAGATACTGACC
ATTGATGCCTCGATCTTATAGCAACGATGCCTGGCGAAGACTTTCTCCCG
CTCGATGGCTACCGAGGCCCAGTCTCCCGTTGACAACCTCACGAGGGAGG
TTCCCAAGCCCGTGTGGAATCCCGAACCCGTCAAGGCGACACTCTACTCA
TTTCCCTCGATGGAGCCCCTGCGCTTCGTTGAGTATCCTCGCAACCACCT
CCTGATGCCGCTACGCAAAGACATCCTGCACCGAGCCGTCGTCTACGAGG
GTGACATGACCCGACAAGGTACCGCAAGCACCAAGTGGAGAGATGATGTG
CATGGAAGTGGCAGGAAGTTGCATGCGCAGAAGGGTACTGGCCGGGCCCG
TGTTGGCGACAAGAAATCCCCGATCCGGAGAGGTGGAGGTGTTGCTTTTG
GCCCTCATCCCCGCGACTTCTCTACGGAGCTCCCTCAGAAAATCTACGAC
CAGGCGTGGCGGATAGCCCTCAGTTACCGCTACAAGCGCGGCCAATTGAT
CATTGTCGACAACGAAATCGCCCTTCCGGAAGGTGCCACTCCCCATATTG
TTGAGGAGATTTTCAAGGTCAACTGCTGGGGCCGGCACTATGGACGGTCA
ACATTGATCACGGACCAGCCGAACGAGGAGCTGTTCGAGACGGTGCGTCA
GGCTGGCGAACACGCGAAGATCCTGGACCGCCGTGACGTGGATGTGAAGG
ACCTGTTGGAGACTGGACGCTTGATCATCGAGAAGCAGGCGCTGGACCGC
ATTCTGTCTCAGCATTCCAAGGATCTGAAGAACAAGCCGGCCAAGGCTTT
GTACTAA
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Coding sequence (CDS) from alignment at OGUI01000001.1:1558881..1559837-

>ATCC64974_5120-T1 ID=ATCC64974_5120-T1|Name=ATCC64974_5120-T1|organism=Aspergillus niger N402|type=CDS|length=1740bp|location=Sequence derived from alignment at OGUI01000001.1:1558881..1559837- (Aspergillus niger N402)
CAACGATGCCTGGCGAAGACTTTCTCCCGCTCGATGGCTACCGAGGCCCA
GTCTCCCGTTGACAACCTCACGAGGGAGGTTCCCAAGCCCGTGTGGAATC
CCGAACCCGTCAAGGCGACACTCTACTCATTTCCCTCGATGGAGCCCCTG
CGCTTCGTTGAGTATCCTCGCAACCACCTCCTGATGCCGCTACGCAAAGA
CATCCTGCACCGAGCCGTCGTCTACGAGGGTGACATGACCCGACAAGGTA
CCGCAAGCACCAAGTGGAGAGATGATGTGCATGGAAGTGGCAGGAAGTTG
CATGCGCAGAAGGGTACTGGCCGGGCCCGTGTTGGCGACAAGAAATCCCC
GATCCGGAGAGGTGGAGGTGTTGCTTTTGGCCCTCATCCCCGCGACTTCT
CTACGGAGCTCCCTCAGAAAATCTACGACCAGGCGTGGCGGATAGCCCTC
AGTTACCGCTACAAGCGCGGCCAATTGATCATTGTCGACAACGAAATCGC
CCTTCCGGAAGGTGCCACTCCCCATATTGTTGAGGAGATTTTCAAGGTCA
ACTGCTGGGGCCGGCACTATGGACGGTCAACATTGATCACGGACCAGCCG
AACGAGGAGCTGTTCGAGACGGTGCGTCAGGCTGGCGAACACGCGAAGAT
CCTGGACCGCCGTGACGTGGATGTGAAGGACCTGTTGGAGACTGGACGCT
TGATCATCGAGAAGCAGGCGCTGGACCGCATTCTGTCTCAGCATTCCAAG
GATCTGAAGAACAAGCCGGCCAAGGCTTTGTACTAAATGCCTGGAAGTGA
CGCTCTTCGCGCACTCAAGTTGCTCTCTCGCAGCTCCGGGGGTCTCCTCT
CGGGCGCTGAGACGACCACGCAACGATGCCTGGCGAAGACTTTCTCCCGC
TCGATGGCTACCGAGGCCCAGTCTCCCGTTGACAACCTCACGAGGGAGGT
TCCCAAGCCCGTGTGGAATCCCGAACCCGTCAAGGCGACACTCTACTCAT
TTCCCTCGATGGAGCCCCTGCGCTTCGTTGAGTATCCTCGCAACCACCTC
CTGATGCCGCTACGCAAAGACATCCTGCACCGAGCCGTCGTCTACGAGGG
TGACATGACCCGACAAGGTACCGCAAGCACCAAGTGGAGAGATGATGTGC
ATGGAAGTGGCAGGAAGTTGCATGCGCAGAAGGGTACTGGCCGGGCCCGT
GTTGGCGACAAGAAATCCCCGATCCGGAGAGGTGGAGGTGTTGCTTTTGG
CCCTCATCCCCGCGACTTCTCTACGGAGCTCCCTCAGAAAATCTACGACC
AGGCGTGGCGGATAGCCCTCAGTTACCGCTACAAGCGCGGCCAATTGATC
ATTGTCGACAACGAAATCGCCCTTCCGGAAGGTGCCACTCCCCATATTGT
TGAGGAGATTTTCAAGGTCAACTGCTGGGGCCGGCACTATGGACGGTCAA
CATTGATCACGGACCAGCCGAACGAGGAGCTGTTCGAGACGGTGCGTCAG
GCTGGCGAACACGCGAAGATCCTGGACCGCCGTGACGTGGATGTGAAGGA
CCTGTTGGAGACTGGACGCTTGATCATCGAGAAGCAGGCGCTGGACCGCA
TTCTGTCTCAGCATTCCAAGGATCTGAAGAACAAGCCGGCCAAGGCTTTG
TACTAAATGCCTGGAAGTGACGCTCTTCGCGCACTCAAGTTGCTCTCTCG
CAGCTCCGGGGGTCTCCTCTCGGGCGCTGAGACGACCACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_5120ATCC64974_5120Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5120-T1ATCC64974_5120-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5120-T1.cdsATCC64974_5120-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5120-T1.exon2ATCC64974_5120-T1.exon2Aspergillus niger N402exon
ATCC64974_5120-T1.exon1ATCC64974_5120-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264NNY
DBxrefInterPro:IPR013005
DBxrefInterPro:IPR023574
DBxrefInterPro:IPR002136
DBxrefPFAM:PF00573
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1558881..1559837 -
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