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ATCC64974_5220-T1, ATCC64974_5220-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_5220-T1
Unique NameATCC64974_5220-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1587208..1587750+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_5220-T1 ID=ATCC64974_5220-T1|Name=ATCC64974_5220-T1|organism=Aspergillus niger N402|type=mRNA|length=543bp|location=Sequence derived from alignment at OGUI01000001.1:1587208..1587750+ (Aspergillus niger N402)
ATGTCCCTCCAAACCCCCCGCATCCTCCCCTCCCACCTCCACGCCTTCCA
CCCCTCCTCCGCCGGCCCACGCACATCCCATACCGTCCGTATCCTAGGAA
CAGTGACTGCTCTGCGCGGCGACACGGCGACTATGACGTGCGGAAACCAC
GGCGATGTGACGCTCATCTTGAAGCCCGATTCGCATTTGCAGATGGGCAA
GTTGGTGGAGATTATTGGGAAGGTGGCGGATCTGGATAATGGGAGTGTAT
GTTTCAATACCTTATTTTTTCCCCCGCTATAAATGAGGGGTTGTTCTTGG
GTAGGATAATGGCTAATTTTGGTTATGTGGCGTTTAGGGCGTGGGTATTA
GAGTCCTGGGAAGTACGGATTGGGGGAGTCCCGCGGATTGCGGTAGGTTT
TCTTCTTTTCTTATGGACTATGGAGAAGGGGTAAAAGGAAAAAGGTGCTA
ATTGTGGTTGTTGATGTGGCTGCAGATTACACGATCTATGAACAGGTTGT
CAATGCTACGCATAAGCTCAAGCCTATCTTTTATGATGAGTGA
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Coding sequence (CDS) from alignment at OGUI01000001.1:1587208..1587750+

>ATCC64974_5220-T1 ID=ATCC64974_5220-T1|Name=ATCC64974_5220-T1|organism=Aspergillus niger N402|type=CDS|length=1107bp|location=Sequence derived from alignment at OGUI01000001.1:1587208..1587750+ (Aspergillus niger N402)
ATGTCCCTCCAAACCCCCCGCATCCTCCCCTCCCACCTCCACGCCTTCCA
CCCCTCCTCCGCCGGCCCACGCACATCCCATACCGTCCGTATCCTAGGAA
CAGTGACTGCTCTGCGCGGCGACACGGCGACTATGACGTGCGGAAACCAC
GGCGATGTGACGCTCATCTTGAAGCCCGATTCGCATTTGCAGATGGGCAA
GTTGGTGGAGATTATTGGGAAGGTGGCGGATCTGGATAATGGGAGTGGCG
TGGGTATTAGAGTCCTGGGAAGTACGGATTGGGGGAGTCCCGCGGATTGC
GATTACACGATCTATGAACAGGTTGTCAATGCTACGCATAAGCTCAAGCC
TATCTTTTATGATGAGTGAATGTCCCTCCAAACCCCCCGCATCCTCCCCT
CCCACCTCCACGCCTTCCACCCCTCCTCCGCCGGCCCACGCACATCCCAT
ACCGTCCGTATCCTAGGAACAGTGACTGCTCTGCGCGGCGACACGGCGAC
TATGACGTGCGGAAACCACGGCGATGTGACGCTCATCTTGAAGCCCGATT
CGCATTTGCAGATGGGCAAGTTGGTGGAGATTATTGGGAAGGTGGCGGAT
CTGGATAATGGGAGTGGCGTGGGTATTAGAGTCCTGGGAAGTACGGATTG
GGGGAGTCCCGCGGATTGCGATTACACGATCTATGAACAGGTTGTCAATG
CTACGCATAAGCTCAAGCCTATCTTTTATGATGAGTGAATGTCCCTCCAA
ACCCCCCGCATCCTCCCCTCCCACCTCCACGCCTTCCACCCCTCCTCCGC
CGGCCCACGCACATCCCATACCGTCCGTATCCTAGGAACAGTGACTGCTC
TGCGCGGCGACACGGCGACTATGACGTGCGGAAACCACGGCGATGTGACG
CTCATCTTGAAGCCCGATTCGCATTTGCAGATGGGCAAGTTGGTGGAGAT
TATTGGGAAGGTGGCGGATCTGGATAATGGGAGTGGCGTGGGTATTAGAG
TCCTGGGAAGTACGGATTGGGGGAGTCCCGCGGATTGCGATTACACGATC
TATGAACAGGTTGTCAATGCTACGCATAAGCTCAAGCCTATCTTTTATGA
TGAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
GO:0006281DNA repair
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_5220ATCC64974_5220Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5220-T1.exon1ATCC64974_5220-T1.exon1Aspergillus niger N402exon
ATCC64974_5220-T1.exon2ATCC64974_5220-T1.exon2Aspergillus niger N402exon
ATCC64974_5220-T1.exon3ATCC64974_5220-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5220-T1.cdsATCC64974_5220-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5220-T1ATCC64974_5220-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR013970
DBxrefPFAM:PF08661
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1587208..1587750 +
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