You are here

Home

ATCC64974_5960-T1, ATCC64974_5960-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_5960-T1
Unique NameATCC64974_5960-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:1780696..1782166+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_5960-T1 ID=ATCC64974_5960-T1|Name=ATCC64974_5960-T1|organism=Aspergillus niger N402|type=mRNA|length=1471bp|location=Sequence derived from alignment at OGUI01000001.1:1780696..1782166+ (Aspergillus niger N402)
ATGTCGGTGTTTGCGCTGCACGTCGGCCGCAGCCTGGCGCAGGCAATGCT
GACCATCATCATGACCTCCTATGGCTACGCCGCTACTTTCGTCATGTCCT
TTACCGTCTGTCGGCTAATTCTATTTTGCAGTCTCTTGCCATTGTACCTG
GTTAAACTGTCATGCAATATCAGCCCCACGTTGGTTCGGAACTTCGCCTG
CCTGTTCTCCAGTCAAGGGAGGAACAGGCTCGTCCAAGAGGCAGAAGAGT
ACCGGGGCCAATGTGAGTCTCCGGCCATCGCTCAGTGCCAAGGGACATAT
CATTTCATCGAGTACAATTTGTATCGCGTCCGTCGTCAGGGACCAGGATG
GATGCCCGACATTCCCTGGGCTGATTGTACGGAGGAGATGGCCATCTGTG
GAGCCACTGTCCGCTTCGTGCATCAGAAACCAACACTCGACGGTCCCGCA
GACCGCAGGCGCCCGATCATCTTCCTGCATGGGAATCCGAGCTGGAGCTA
TATCTGGAGAAATGTATAGATGTCAAGTATCAACCTTTGGATCAAAATGT
GGCTGACCCCAGCAGATCCTTCCTCATCTTGTGGACCAAGGTCATGAAGT
CTATGCGCTCGACTGGCTCGGACACGGTCGCAGTGACAAGGCGACACATC
CCGAATCGGTTACCTTTGAACTGCATATTCACACGCTTCTGCAGTTGTTC
AAGGTCCACAATCTCCGCCATGCAGCCATCGTCGCGCATGACTGGGGTGG
GTACGTTGTTGACCCTGCTAGTATCTTTTGCTGTCTCCGTCCATGGCTCA
CTGTCTCCAGGTGCGTCGCGTTGTGCGCAATCCCGCAGCTGCCTCAAATG
GCCTGCACTCGCCTCCTCCTCCTGAATTCCTTTCTACCGCCGCGTCCGGA
CGAATGGAATCTTCATTACGGTCTACTCTATGCTATCTGGTTTCTTTCAA
CGGGCCTACTGGGCGGCTATGTACCCGAGTCAGGGGTAATGCGCTTCATG
TCCCCACACTTGTCGCAACCCGAGGTCGATGGATACAGTGCGCCGTATCA
ATCTCTCCCAGTAGCCACCAAGGCCAGTGTCTTCCGGTTCGGGCACATTG
TCCCGGTCACGCCGCGCTTTGCCTTACATGGCCTCCGGCAGACGCGGTTG
TGGAAATTGTTGGAAGGTCTCTGCGGACCCCGTCATTTTGACAACCTTAG
TCAACAGGCCAGACTGGCAAAGCGCGGAGAGGAGGTCCGACAGAGCTGGA
GAGCAGGCCTTGAGAAGGGTAACCCAGACGTTGCGGTGGTGTTCGGAGAG
CAAGACCCGCTATTGAAGCTGTACAAGGACATTCTCGTCGATTGCATTCA
CCCGGCACATATGGTTGAATGGGCGACACAGGGCATATGGCTCTCTGGAG
GAGGCCACTACCCCATGGAAGAGAAAGCGGCTGATATTTCTCTCTTGGCG
GAGAAGCTTGCAAGCCAATGA
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:1780696..1782166+

>ATCC64974_5960-T1 ID=ATCC64974_5960-T1|Name=ATCC64974_5960-T1|organism=Aspergillus niger N402|type=CDS|length=4077bp|location=Sequence derived from alignment at OGUI01000001.1:1780696..1782166+ (Aspergillus niger N402)
ATGTCGGTGTTTGCGCTGCACGTCGGCCGCAGCCTGGCGCAGGCAATGCT
GACCATCATCATGACCTCCTATGGCTACGCCGCTACTTTCGTCATGTCCT
TTACCGTCTGTCGGCTAATTCTATTTTGCAGTCTCTTGCCATTGTACCTG
GTTAAACTGTCATGCAATATCAGCCCCACGTTGGTTCGGAACTTCGCCTG
CCTGTTCTCCAGTCAAGGGAGGAACAGGCTCGTCCAAGAGGCAGAAGAGT
ACCGGGGCCAATGTGAGTCTCCGGCCATCGCTCAGTGCCAAGGGACATAT
CATTTCATCGAGTACAATTTGTATCGCGTCCGTCGTCAGGGACCAGGATG
GATGCCCGACATTCCCTGGGCTGATTGTACGGAGGAGATGGCCATCTGTG
GAGCCACTGTCCGCTTCGTGCATCAGAAACCAACACTCGACGGTCCCGCA
GACCGCAGGCGCCCGATCATCTTCCTGCATGGGAATCCGAGCTGGAGCTA
TATCTGGAGAAATATCCTTCCTCATCTTGTGGACCAAGGTCATGAAGTCT
ATGCGCTCGACTGGCTCGGACACGGTCGCAGTGACAAGGCGACACATCCC
GAATCGGTTACCTTTGAACTGCATATTCACACGCTTCTGCAGTTGTTCAA
GGTCCACAATCTCCGCCATGCAGCCATCGTCGCGCATGACTGGGGTGGGT
GCGTCGCGTTGTGCGCAATCCCGCAGCTGCCTCAAATGGCCTGCACTCGC
CTCCTCCTCCTGAATTCCTTTCTACCGCCGCGTCCGGACGAATGGAATCT
TCATTACGGTCTACTCTATGCTATCTGGTTTCTTTCAACGGGCCTACTGG
GCGGCTATGTACCCGAGTCAGGGGTAATGCGCTTCATGTCCCCACACTTG
TCGCAACCCGAGGTCGATGGATACAGTGCGCCGTATCAATCTCTCCCAGT
AGCCACCAAGGCCAGTGTCTTCCGGTTCGGGCACATTGTCCCGGTCACGC
CGCGCTTTGCCTTACATGGCCTCCGGCAGACGCGGTTGTGGAAATTGTTG
GAAGGTCTCTGCGGACCCCGTCATTTTGACAACCTTAGTCAACAGGCCAG
ACTGGCAAAGCGCGGAGAGGAGGTCCGACAGAGCTGGAGAGCAGGCCTTG
AGAAGGGTAACCCAGACGTTGCGGTGGTGTTCGGAGAGCAAGACCCGCTA
TTGAAGCTGTACAAGGACATTCTCGTCGATTGCATTCACCCGGCACATAT
GGTTGAATGGGCGACACAGGGCATATGGCTCTCTGGAGGAGGCCACTACC
CCATGGAAGAGAAAGCGGCTGATATTTCTCTCTTGGCGGAGAAGCTTGCA
AGCCAATGAATGTCGGTGTTTGCGCTGCACGTCGGCCGCAGCCTGGCGCA
GGCAATGCTGACCATCATCATGACCTCCTATGGCTACGCCGCTACTTTCG
TCATGTCCTTTACCGTCTGTCGGCTAATTCTATTTTGCAGTCTCTTGCCA
TTGTACCTGGTTAAACTGTCATGCAATATCAGCCCCACGTTGGTTCGGAA
CTTCGCCTGCCTGTTCTCCAGTCAAGGGAGGAACAGGCTCGTCCAAGAGG
CAGAAGAGTACCGGGGCCAATGTGAGTCTCCGGCCATCGCTCAGTGCCAA
GGGACATATCATTTCATCGAGTACAATTTGTATCGCGTCCGTCGTCAGGG
ACCAGGATGGATGCCCGACATTCCCTGGGCTGATTGTACGGAGGAGATGG
CCATCTGTGGAGCCACTGTCCGCTTCGTGCATCAGAAACCAACACTCGAC
GGTCCCGCAGACCGCAGGCGCCCGATCATCTTCCTGCATGGGAATCCGAG
CTGGAGCTATATCTGGAGAAATATCCTTCCTCATCTTGTGGACCAAGGTC
ATGAAGTCTATGCGCTCGACTGGCTCGGACACGGTCGCAGTGACAAGGCG
ACACATCCCGAATCGGTTACCTTTGAACTGCATATTCACACGCTTCTGCA
GTTGTTCAAGGTCCACAATCTCCGCCATGCAGCCATCGTCGCGCATGACT
GGGGTGGGTGCGTCGCGTTGTGCGCAATCCCGCAGCTGCCTCAAATGGCC
TGCACTCGCCTCCTCCTCCTGAATTCCTTTCTACCGCCGCGTCCGGACGA
ATGGAATCTTCATTACGGTCTACTCTATGCTATCTGGTTTCTTTCAACGG
GCCTACTGGGCGGCTATGTACCCGAGTCAGGGGTAATGCGCTTCATGTCC
CCACACTTGTCGCAACCCGAGGTCGATGGATACAGTGCGCCGTATCAATC
TCTCCCAGTAGCCACCAAGGCCAGTGTCTTCCGGTTCGGGCACATTGTCC
CGGTCACGCCGCGCTTTGCCTTACATGGCCTCCGGCAGACGCGGTTGTGG
AAATTGTTGGAAGGTCTCTGCGGACCCCGTCATTTTGACAACCTTAGTCA
ACAGGCCAGACTGGCAAAGCGCGGAGAGGAGGTCCGACAGAGCTGGAGAG
CAGGCCTTGAGAAGGGTAACCCAGACGTTGCGGTGGTGTTCGGAGAGCAA
GACCCGCTATTGAAGCTGTACAAGGACATTCTCGTCGATTGCATTCACCC
GGCACATATGGTTGAATGGGCGACACAGGGCATATGGCTCTCTGGAGGAG
GCCACTACCCCATGGAAGAGAAAGCGGCTGATATTTCTCTCTTGGCGGAG
AAGCTTGCAAGCCAATGAATGTCGGTGTTTGCGCTGCACGTCGGCCGCAG
CCTGGCGCAGGCAATGCTGACCATCATCATGACCTCCTATGGCTACGCCG
CTACTTTCGTCATGTCCTTTACCGTCTGTCGGCTAATTCTATTTTGCAGT
CTCTTGCCATTGTACCTGGTTAAACTGTCATGCAATATCAGCCCCACGTT
GGTTCGGAACTTCGCCTGCCTGTTCTCCAGTCAAGGGAGGAACAGGCTCG
TCCAAGAGGCAGAAGAGTACCGGGGCCAATGTGAGTCTCCGGCCATCGCT
CAGTGCCAAGGGACATATCATTTCATCGAGTACAATTTGTATCGCGTCCG
TCGTCAGGGACCAGGATGGATGCCCGACATTCCCTGGGCTGATTGTACGG
AGGAGATGGCCATCTGTGGAGCCACTGTCCGCTTCGTGCATCAGAAACCA
ACACTCGACGGTCCCGCAGACCGCAGGCGCCCGATCATCTTCCTGCATGG
GAATCCGAGCTGGAGCTATATCTGGAGAAATATCCTTCCTCATCTTGTGG
ACCAAGGTCATGAAGTCTATGCGCTCGACTGGCTCGGACACGGTCGCAGT
GACAAGGCGACACATCCCGAATCGGTTACCTTTGAACTGCATATTCACAC
GCTTCTGCAGTTGTTCAAGGTCCACAATCTCCGCCATGCAGCCATCGTCG
CGCATGACTGGGGTGGGTGCGTCGCGTTGTGCGCAATCCCGCAGCTGCCT
CAAATGGCCTGCACTCGCCTCCTCCTCCTGAATTCCTTTCTACCGCCGCG
TCCGGACGAATGGAATCTTCATTACGGTCTACTCTATGCTATCTGGTTTC
TTTCAACGGGCCTACTGGGCGGCTATGTACCCGAGTCAGGGGTAATGCGC
TTCATGTCCCCACACTTGTCGCAACCCGAGGTCGATGGATACAGTGCGCC
GTATCAATCTCTCCCAGTAGCCACCAAGGCCAGTGTCTTCCGGTTCGGGC
ACATTGTCCCGGTCACGCCGCGCTTTGCCTTACATGGCCTCCGGCAGACG
CGGTTGTGGAAATTGTTGGAAGGTCTCTGCGGACCCCGTCATTTTGACAA
CCTTAGTCAACAGGCCAGACTGGCAAAGCGCGGAGAGGAGGTCCGACAGA
GCTGGAGAGCAGGCCTTGAGAAGGGTAACCCAGACGTTGCGGTGGTGTTC
GGAGAGCAAGACCCGCTATTGAAGCTGTACAAGGACATTCTCGTCGATTG
CATTCACCCGGCACATATGGTTGAATGGGCGACACAGGGCATATGGCTCT
CTGGAGGAGGCCACTACCCCATGGAAGAGAAAGCGGCTGATATTTCTCTC
TTGGCGGAGAAGCTTGCAAGCCAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_5960ATCC64974_5960Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5960-T1.exon1ATCC64974_5960-T1.exon1Aspergillus niger N402exon
ATCC64974_5960-T1.exon2ATCC64974_5960-T1.exon2Aspergillus niger N402exon
ATCC64974_5960-T1.exon3ATCC64974_5960-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5960-T1.cdsATCC64974_5960-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_5960-T1ATCC64974_5960-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteMEROPS:MER0003280
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000073
DBxrefInterPro:IPR000639
DBxrefPFAM:PF12697
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:1780696..1782166 +
Powered by Drupal