|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000001.1:1917669..1920189+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_6340-T1 ID=ATCC64974_6340-T1|Name=ATCC64974_6340-T1|organism=Aspergillus niger N402|type=mRNA|length=2521bp|location=Sequence derived from alignment at OGUI01000001.1:1917669..1920189+ (Aspergillus niger N402)
ATGAGTCCCGTGTCTGGCCAGATCTCCCCGCCCACCGAGCTGGCCGGGGA
CGCTTCCCTGACCCGCAAACGTCCCCGGCCCGTGGTCTCGTGCTTGCGCT
GTCGCAAGAAGAAGCTCAAGTGCGACCGGGTCATGCCCTGCGAGAACTGC
TCCAAAGCTGGTTGTGCCCCCGACTGTGTCTTCCATCCCAGTCCCGATGG
CGTGGATAATGTGCCGGACCAGCCCAGTGCGAAGCGCATGCATCTGCCAC
CTGACTTCCCGTTCCCCTCCGATCCTCGGGGCGATCCGGCCAGCGCCAGG
CTGCCTCCGCCGCCCGCGGCCATCGGCCTGCTGGAGGATCTCCAGCAACG
CTTGCAGCGTGTTGAGGAGGTGCTCTCCTTGAAGCCGTTGACTCGCTCGT
ATGCCGGCTCCCTTAAGGATGTGGTGGCTCGCGATGCCAGTCCATCTGTC
CGCCAGACCACCCCGTCGACCCATGCTCCCCCGTATCCCGGCACTTTGGT
TGTCAAAGGAAAGGGCACACGATCACGTTACCATGGCCAGAACAACAGAA
CCACTCTCTTGCATCAGGTAAGTCCCCCCTTCTAGATTTGTCATTGGAAT
GCGTACCTGAGAATGTGCAGTTCTCCGAAGCGCGAGAATTCATCGAACGC
TGCACCAAGGATTCCGCCATTTTGGGGCTGGCCAAGGAAGTGCAATTTCT
ACAGAGCAAATCTAAGATGCCCATGAGCTCCCCCGAATCCATGCCCGATC
TCGACTACTCTCCCGAGCTGCTGCAAATGCAGAGCTCCTTGCCGTCTAAA
GCGGTCTGTGACCGACTCGTGAACCTGTACACCACCAACTTTGAACGCAC
CCTGCGCATGTTGCATGTCCCGTCCTTTCTCCGCCAGTATGCCGACTTCT
GGAACGCTCCGGGCCCGGACGCGGAACGCTCCGCCGCCTTCTTGCCGCAA
CTGACGGCCGTCCTGGCAGCCGCGCTGCCCCTGGAAGACCCCAGCTTCCG
ACTCGAGTATTCCTCTGTCTGGGAATACCTGCAGACGCCCGCGGTCAACC
TCGTCCGCGTGTGGCTGCAGAAACTGGGGCGCAAGCAGCGCACGGAGCTG
GTCTCGTTGCAGATCGAGGCACTCGTGTTGTTGGCGCGACGACTGCGGCT
CGCCTCGCAGGAAGAGCTGTGGCGCGCCACCGGCACGCTGGTGCGGTCGG
CCATGGTGGTGGGCCTGCATCTGGATCTGTCCGGGAATAAGCAGCTGTCA
CCGTTTCAGATCGAAGTGCGGCGCCGCTTGTGGATTACCATCGTAGAGAT
GGACCTGCAGACCTCTATCGCCTCGGGTATGCCTGTGACCATCCCGGACC
TGGACTTTGATCCGCTGATCCCGACCAATCTGAATGACACCGATTTCGAC
GAATCCACCACGGAGCTGCCGCCGGCGAAACCTATGCACGAGTGGACGGA
TACCCTCGCGCAGGTCACGTTGGCCTCCTCGTTACCCCACCGCATCCGAG
CCATGTCGATGGTGCGCACCTCGAGCCCGGGAATGGATCTGCGTGACATT
GTCAAGCAGGGTCGACGCCTGGAAGAATGCCTGCGCCAGATCCCTCCTCC
GCTCAAGCTGGACCCGTCCCCAATCCATGGGGAGACTCCCGGGCCAGCCC
TGCTGTTGAACCGGGTGCTGCTGGACGTATACATGCGCCGGCCGTTGCTG
TGCCTCTACCGGCCGATCGTCATGGGCGAGAGCCGCGAGGATCAGCTCTT
CCTGGAGATCGAGCAAGCGTGTCTGGAGTCTTCGCTAGTGGTGTTGTCCT
ACCAGGATTACTTCGACCCGAACGTGGCGGACCTGGACGTCTTCAAATCG
ACCGCCTACTGGGACGTATTCCAGCTTTTCTGCAAAAACGACATCCCGTG
GGCTGCGCTGAGCGTGTGCGGCTATATGAAACTGTCCAACCAGCAACACT
CGGGTGCCCCGACACCAATGGCACCCGCTCCCGCCTACTCCCCCAGTCAG
CCGACGACTACCCATACCAAGGCCAGCCTTACACGCATTGTCGAGAATAC
CCTTGACGGGCTGACCCGCACGATCGGCGAAACCGGCAGCAACATCAAGG
ATGTGATGCTGCTGGCAGTGGTACTGCAATCGGTGCGGGCGCGGGGGTCC
GCCGAGCTCAAGGAACGGTGGATGCAGCAGGGGGCTGTGAAGGCGTTGTC
GGCCTGTCGGCAGCATCTGTTGCCGTCTGTAGCGCAGCAATCGTTTGCGT
TTAATCTGACAGATTTTGCACAAATGGTATGTCGTCCCCATTCTTTTCAC
ACATTATTCTTCTAGGAAGTGCCATCGATCATGCTAATCTACTCCAGCTC
CAAACCACACAGCCTATCTTTCCCACTACCACAGACCCAGGCTACACGCC
GTCCACGCAGCCCCAGCTGCCTGACTTCTTAGCGGAATCTTCTGCTTTAG
CAACAGAGTTCAACAACTTTCGCGGCGATCCATTTGCGTTTGAAGATGGA
TCGTTTGCATGGAATATGTAA back to topCoding sequence (CDS) from alignment at OGUI01000001.1:1917669..1920189+ >ATCC64974_6340-T1 ID=ATCC64974_6340-T1|Name=ATCC64974_6340-T1|organism=Aspergillus niger N402|type=CDS|length=7191bp|location=Sequence derived from alignment at OGUI01000001.1:1917669..1920189+ (Aspergillus niger N402)
ATGAGTCCCGTGTCTGGCCAGATCTCCCCGCCCACCGAGCTGGCCGGGGA
CGCTTCCCTGACCCGCAAACGTCCCCGGCCCGTGGTCTCGTGCTTGCGCT
GTCGCAAGAAGAAGCTCAAGTGCGACCGGGTCATGCCCTGCGAGAACTGC
TCCAAAGCTGGTTGTGCCCCCGACTGTGTCTTCCATCCCAGTCCCGATGG
CGTGGATAATGTGCCGGACCAGCCCAGTGCGAAGCGCATGCATCTGCCAC
CTGACTTCCCGTTCCCCTCCGATCCTCGGGGCGATCCGGCCAGCGCCAGG
CTGCCTCCGCCGCCCGCGGCCATCGGCCTGCTGGAGGATCTCCAGCAACG
CTTGCAGCGTGTTGAGGAGGTGCTCTCCTTGAAGCCGTTGACTCGCTCGT
ATGCCGGCTCCCTTAAGGATGTGGTGGCTCGCGATGCCAGTCCATCTGTC
CGCCAGACCACCCCGTCGACCCATGCTCCCCCGTATCCCGGCACTTTGGT
TGTCAAAGGAAAGGGCACACGATCACGTTACCATGGCCAGAACAACAGAA
CCACTCTCTTGCATCAGTTCTCCGAAGCGCGAGAATTCATCGAACGCTGC
ACCAAGGATTCCGCCATTTTGGGGCTGGCCAAGGAAGTGCAATTTCTACA
GAGCAAATCTAAGATGCCCATGAGCTCCCCCGAATCCATGCCCGATCTCG
ACTACTCTCCCGAGCTGCTGCAAATGCAGAGCTCCTTGCCGTCTAAAGCG
GTCTGTGACCGACTCGTGAACCTGTACACCACCAACTTTGAACGCACCCT
GCGCATGTTGCATGTCCCGTCCTTTCTCCGCCAGTATGCCGACTTCTGGA
ACGCTCCGGGCCCGGACGCGGAACGCTCCGCCGCCTTCTTGCCGCAACTG
ACGGCCGTCCTGGCAGCCGCGCTGCCCCTGGAAGACCCCAGCTTCCGACT
CGAGTATTCCTCTGTCTGGGAATACCTGCAGACGCCCGCGGTCAACCTCG
TCCGCGTGTGGCTGCAGAAACTGGGGCGCAAGCAGCGCACGGAGCTGGTC
TCGTTGCAGATCGAGGCACTCGTGTTGTTGGCGCGACGACTGCGGCTCGC
CTCGCAGGAAGAGCTGTGGCGCGCCACCGGCACGCTGGTGCGGTCGGCCA
TGGTGGTGGGCCTGCATCTGGATCTGTCCGGGAATAAGCAGCTGTCACCG
TTTCAGATCGAAGTGCGGCGCCGCTTGTGGATTACCATCGTAGAGATGGA
CCTGCAGACCTCTATCGCCTCGGGTATGCCTGTGACCATCCCGGACCTGG
ACTTTGATCCGCTGATCCCGACCAATCTGAATGACACCGATTTCGACGAA
TCCACCACGGAGCTGCCGCCGGCGAAACCTATGCACGAGTGGACGGATAC
CCTCGCGCAGGTCACGTTGGCCTCCTCGTTACCCCACCGCATCCGAGCCA
TGTCGATGGTGCGCACCTCGAGCCCGGGAATGGATCTGCGTGACATTGTC
AAGCAGGGTCGACGCCTGGAAGAATGCCTGCGCCAGATCCCTCCTCCGCT
CAAGCTGGACCCGTCCCCAATCCATGGGGAGACTCCCGGGCCAGCCCTGC
TGTTGAACCGGGTGCTGCTGGACGTATACATGCGCCGGCCGTTGCTGTGC
CTCTACCGGCCGATCGTCATGGGCGAGAGCCGCGAGGATCAGCTCTTCCT
GGAGATCGAGCAAGCGTGTCTGGAGTCTTCGCTAGTGGTGTTGTCCTACC
AGGATTACTTCGACCCGAACGTGGCGGACCTGGACGTCTTCAAATCGACC
GCCTACTGGGACGTATTCCAGCTTTTCTGCAAAAACGACATCCCGTGGGC
TGCGCTGAGCGTGTGCGGCTATATGAAACTGTCCAACCAGCAACACTCGG
GTGCCCCGACACCAATGGCACCCGCTCCCGCCTACTCCCCCAGTCAGCCG
ACGACTACCCATACCAAGGCCAGCCTTACACGCATTGTCGAGAATACCCT
TGACGGGCTGACCCGCACGATCGGCGAAACCGGCAGCAACATCAAGGATG
TGATGCTGCTGGCAGTGGTACTGCAATCGGTGCGGGCGCGGGGGTCCGCC
GAGCTCAAGGAACGGTGGATGCAGCAGGGGGCTGTGAAGGCGTTGTCGGC
CTGTCGGCAGCATCTGTTGCCGTCTGTAGCGCAGCAATCGTTTGCGTTTA
ATCTGACAGATTTTGCACAAATGCTCCAAACCACACAGCCTATCTTTCCC
ACTACCACAGACCCAGGCTACACGCCGTCCACGCAGCCCCAGCTGCCTGA
CTTCTTAGCGGAATCTTCTGCTTTAGCAACAGAGTTCAACAACTTTCGCG
GCGATCCATTTGCGTTTGAAGATGGATCGTTTGCATGGAATATGTAAATG
AGTCCCGTGTCTGGCCAGATCTCCCCGCCCACCGAGCTGGCCGGGGACGC
TTCCCTGACCCGCAAACGTCCCCGGCCCGTGGTCTCGTGCTTGCGCTGTC
GCAAGAAGAAGCTCAAGTGCGACCGGGTCATGCCCTGCGAGAACTGCTCC
AAAGCTGGTTGTGCCCCCGACTGTGTCTTCCATCCCAGTCCCGATGGCGT
GGATAATGTGCCGGACCAGCCCAGTGCGAAGCGCATGCATCTGCCACCTG
ACTTCCCGTTCCCCTCCGATCCTCGGGGCGATCCGGCCAGCGCCAGGCTG
CCTCCGCCGCCCGCGGCCATCGGCCTGCTGGAGGATCTCCAGCAACGCTT
GCAGCGTGTTGAGGAGGTGCTCTCCTTGAAGCCGTTGACTCGCTCGTATG
CCGGCTCCCTTAAGGATGTGGTGGCTCGCGATGCCAGTCCATCTGTCCGC
CAGACCACCCCGTCGACCCATGCTCCCCCGTATCCCGGCACTTTGGTTGT
CAAAGGAAAGGGCACACGATCACGTTACCATGGCCAGAACAACAGAACCA
CTCTCTTGCATCAGTTCTCCGAAGCGCGAGAATTCATCGAACGCTGCACC
AAGGATTCCGCCATTTTGGGGCTGGCCAAGGAAGTGCAATTTCTACAGAG
CAAATCTAAGATGCCCATGAGCTCCCCCGAATCCATGCCCGATCTCGACT
ACTCTCCCGAGCTGCTGCAAATGCAGAGCTCCTTGCCGTCTAAAGCGGTC
TGTGACCGACTCGTGAACCTGTACACCACCAACTTTGAACGCACCCTGCG
CATGTTGCATGTCCCGTCCTTTCTCCGCCAGTATGCCGACTTCTGGAACG
CTCCGGGCCCGGACGCGGAACGCTCCGCCGCCTTCTTGCCGCAACTGACG
GCCGTCCTGGCAGCCGCGCTGCCCCTGGAAGACCCCAGCTTCCGACTCGA
GTATTCCTCTGTCTGGGAATACCTGCAGACGCCCGCGGTCAACCTCGTCC
GCGTGTGGCTGCAGAAACTGGGGCGCAAGCAGCGCACGGAGCTGGTCTCG
TTGCAGATCGAGGCACTCGTGTTGTTGGCGCGACGACTGCGGCTCGCCTC
GCAGGAAGAGCTGTGGCGCGCCACCGGCACGCTGGTGCGGTCGGCCATGG
TGGTGGGCCTGCATCTGGATCTGTCCGGGAATAAGCAGCTGTCACCGTTT
CAGATCGAAGTGCGGCGCCGCTTGTGGATTACCATCGTAGAGATGGACCT
GCAGACCTCTATCGCCTCGGGTATGCCTGTGACCATCCCGGACCTGGACT
TTGATCCGCTGATCCCGACCAATCTGAATGACACCGATTTCGACGAATCC
ACCACGGAGCTGCCGCCGGCGAAACCTATGCACGAGTGGACGGATACCCT
CGCGCAGGTCACGTTGGCCTCCTCGTTACCCCACCGCATCCGAGCCATGT
CGATGGTGCGCACCTCGAGCCCGGGAATGGATCTGCGTGACATTGTCAAG
CAGGGTCGACGCCTGGAAGAATGCCTGCGCCAGATCCCTCCTCCGCTCAA
GCTGGACCCGTCCCCAATCCATGGGGAGACTCCCGGGCCAGCCCTGCTGT
TGAACCGGGTGCTGCTGGACGTATACATGCGCCGGCCGTTGCTGTGCCTC
TACCGGCCGATCGTCATGGGCGAGAGCCGCGAGGATCAGCTCTTCCTGGA
GATCGAGCAAGCGTGTCTGGAGTCTTCGCTAGTGGTGTTGTCCTACCAGG
ATTACTTCGACCCGAACGTGGCGGACCTGGACGTCTTCAAATCGACCGCC
TACTGGGACGTATTCCAGCTTTTCTGCAAAAACGACATCCCGTGGGCTGC
GCTGAGCGTGTGCGGCTATATGAAACTGTCCAACCAGCAACACTCGGGTG
CCCCGACACCAATGGCACCCGCTCCCGCCTACTCCCCCAGTCAGCCGACG
ACTACCCATACCAAGGCCAGCCTTACACGCATTGTCGAGAATACCCTTGA
CGGGCTGACCCGCACGATCGGCGAAACCGGCAGCAACATCAAGGATGTGA
TGCTGCTGGCAGTGGTACTGCAATCGGTGCGGGCGCGGGGGTCCGCCGAG
CTCAAGGAACGGTGGATGCAGCAGGGGGCTGTGAAGGCGTTGTCGGCCTG
TCGGCAGCATCTGTTGCCGTCTGTAGCGCAGCAATCGTTTGCGTTTAATC
TGACAGATTTTGCACAAATGCTCCAAACCACACAGCCTATCTTTCCCACT
ACCACAGACCCAGGCTACACGCCGTCCACGCAGCCCCAGCTGCCTGACTT
CTTAGCGGAATCTTCTGCTTTAGCAACAGAGTTCAACAACTTTCGCGGCG
ATCCATTTGCGTTTGAAGATGGATCGTTTGCATGGAATATGTAAATGAGT
CCCGTGTCTGGCCAGATCTCCCCGCCCACCGAGCTGGCCGGGGACGCTTC
CCTGACCCGCAAACGTCCCCGGCCCGTGGTCTCGTGCTTGCGCTGTCGCA
AGAAGAAGCTCAAGTGCGACCGGGTCATGCCCTGCGAGAACTGCTCCAAA
GCTGGTTGTGCCCCCGACTGTGTCTTCCATCCCAGTCCCGATGGCGTGGA
TAATGTGCCGGACCAGCCCAGTGCGAAGCGCATGCATCTGCCACCTGACT
TCCCGTTCCCCTCCGATCCTCGGGGCGATCCGGCCAGCGCCAGGCTGCCT
CCGCCGCCCGCGGCCATCGGCCTGCTGGAGGATCTCCAGCAACGCTTGCA
GCGTGTTGAGGAGGTGCTCTCCTTGAAGCCGTTGACTCGCTCGTATGCCG
GCTCCCTTAAGGATGTGGTGGCTCGCGATGCCAGTCCATCTGTCCGCCAG
ACCACCCCGTCGACCCATGCTCCCCCGTATCCCGGCACTTTGGTTGTCAA
AGGAAAGGGCACACGATCACGTTACCATGGCCAGAACAACAGAACCACTC
TCTTGCATCAGTTCTCCGAAGCGCGAGAATTCATCGAACGCTGCACCAAG
GATTCCGCCATTTTGGGGCTGGCCAAGGAAGTGCAATTTCTACAGAGCAA
ATCTAAGATGCCCATGAGCTCCCCCGAATCCATGCCCGATCTCGACTACT
CTCCCGAGCTGCTGCAAATGCAGAGCTCCTTGCCGTCTAAAGCGGTCTGT
GACCGACTCGTGAACCTGTACACCACCAACTTTGAACGCACCCTGCGCAT
GTTGCATGTCCCGTCCTTTCTCCGCCAGTATGCCGACTTCTGGAACGCTC
CGGGCCCGGACGCGGAACGCTCCGCCGCCTTCTTGCCGCAACTGACGGCC
GTCCTGGCAGCCGCGCTGCCCCTGGAAGACCCCAGCTTCCGACTCGAGTA
TTCCTCTGTCTGGGAATACCTGCAGACGCCCGCGGTCAACCTCGTCCGCG
TGTGGCTGCAGAAACTGGGGCGCAAGCAGCGCACGGAGCTGGTCTCGTTG
CAGATCGAGGCACTCGTGTTGTTGGCGCGACGACTGCGGCTCGCCTCGCA
GGAAGAGCTGTGGCGCGCCACCGGCACGCTGGTGCGGTCGGCCATGGTGG
TGGGCCTGCATCTGGATCTGTCCGGGAATAAGCAGCTGTCACCGTTTCAG
ATCGAAGTGCGGCGCCGCTTGTGGATTACCATCGTAGAGATGGACCTGCA
GACCTCTATCGCCTCGGGTATGCCTGTGACCATCCCGGACCTGGACTTTG
ATCCGCTGATCCCGACCAATCTGAATGACACCGATTTCGACGAATCCACC
ACGGAGCTGCCGCCGGCGAAACCTATGCACGAGTGGACGGATACCCTCGC
GCAGGTCACGTTGGCCTCCTCGTTACCCCACCGCATCCGAGCCATGTCGA
TGGTGCGCACCTCGAGCCCGGGAATGGATCTGCGTGACATTGTCAAGCAG
GGTCGACGCCTGGAAGAATGCCTGCGCCAGATCCCTCCTCCGCTCAAGCT
GGACCCGTCCCCAATCCATGGGGAGACTCCCGGGCCAGCCCTGCTGTTGA
ACCGGGTGCTGCTGGACGTATACATGCGCCGGCCGTTGCTGTGCCTCTAC
CGGCCGATCGTCATGGGCGAGAGCCGCGAGGATCAGCTCTTCCTGGAGAT
CGAGCAAGCGTGTCTGGAGTCTTCGCTAGTGGTGTTGTCCTACCAGGATT
ACTTCGACCCGAACGTGGCGGACCTGGACGTCTTCAAATCGACCGCCTAC
TGGGACGTATTCCAGCTTTTCTGCAAAAACGACATCCCGTGGGCTGCGCT
GAGCGTGTGCGGCTATATGAAACTGTCCAACCAGCAACACTCGGGTGCCC
CGACACCAATGGCACCCGCTCCCGCCTACTCCCCCAGTCAGCCGACGACT
ACCCATACCAAGGCCAGCCTTACACGCATTGTCGAGAATACCCTTGACGG
GCTGACCCGCACGATCGGCGAAACCGGCAGCAACATCAAGGATGTGATGC
TGCTGGCAGTGGTACTGCAATCGGTGCGGGCGCGGGGGTCCGCCGAGCTC
AAGGAACGGTGGATGCAGCAGGGGGCTGTGAAGGCGTTGTCGGCCTGTCG
GCAGCATCTGTTGCCGTCTGTAGCGCAGCAATCGTTTGCGTTTAATCTGA
CAGATTTTGCACAAATGCTCCAAACCACACAGCCTATCTTTCCCACTACC
ACAGACCCAGGCTACACGCCGTCCACGCAGCCCCAGCTGCCTGACTTCTT
AGCGGAATCTTCTGCTTTAGCAACAGAGTTCAACAACTTTCGCGGCGATC
CATTTGCGTTTGAAGATGGATCGTTTGCATGGAATATGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_6340-T1 | ATCC64974_6340-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000011.6 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000001.1 | supercontig | OGUI01000001.1:1917669..1920189 + |
|
