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ATCC64974_8330-T1, ATCC64974_8330-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_8330-T1
Unique NameATCC64974_8330-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:280976..282183+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_8330-T1 ID=ATCC64974_8330-T1|Name=ATCC64974_8330-T1|organism=Aspergillus niger N402|type=mRNA|length=1208bp|location=Sequence derived from alignment at OGUI01000002.1:280976..282183+ (Aspergillus niger N402)
ATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGGTGAGTATTACTCTTCA
TTTACCTGAGCTCCAGCTCCAAACATCATTGCGACAACCCCTCCTCTCTT
ATCGATAACACCGCGCAACTGCGCACAGGATGGAAGGATGGCCACACCTA
CACATACAATGCGCGCACATCCTATCTACCTCTATCCATCTATACACCTT
CCAATACATTGTCCAGAGAGAAGCTAACAAGCTATCTCCCAGGTCCTCTC
GGGCAAAGGCGGCGTCGGCAAATCCAGCGTAACCCTGCAACTCGCCCTCG
CGCTCACCCTGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTCACC
GGCCCTTCAATCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTACCCA
AGCGCCAGGCGGTTGGCTTCCTGTTCCCGTTCACCCTTCCACCATCATCA
CCACACCCAATGCCTCCTCCACCTCACAACCAGATAATACAACAACAACG
GCAACAGAAACAGAAGGTGGACGCGCAATAAAACACGGCTCTCTCCGCTG
CATGTCCCTCGGCTTCCTTTTACGTTCCCGGTCCGATGCCGTAATCTGGC
GCGGGCCCAAAAAGACAGCCATGATCCGCCAATTCCTCTCCGATGTGCTG
TGGAATGAAACTGATTACTTGCTTATTGATACGCCTCCCGGAACTAGTGA
TGAGCATATTGCTCTTGCGGAGCAGCTCTTGACGCTTTGTACAATCGATG
CTTCCTCTGCAACTGGAATGCCTCGACTGGCTGGTGCGGTACTGGTCACT
ACACCACAGGCGGTAGCAACGTCTGATGTACGGAAGGAGGTGAATTTCTG
CGTTAAGACGAGGATTCCGATGCTGGGGGTGGTGGAGAATATGTCTGGTT
ATACGTGTCCGTGCTGTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGG
GGGCAGGTTCTGGCAGAAGAGATGGGTGTAAGGTTTTTGGGAAAGGTGCC
CGTTGACGTTGGGTTTGGGGAGTTGGTGGAGGGGAAGATTGGTGGGGAGG
AGGATAGTGAGGATGAGGATGAGGATACTAATGGGGAGAAGAAGGAGGAA
GAAGAGAAGGATGAGAGGCCGCTAGTGGAAAGGTATCGGGAATGTTGGTC
GTATGCGCGGTTCGAGGACTTTTCGAAGACGTTGATTGCGGAGATTGAGG
GGCAATGA
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Coding sequence (CDS) from alignment at OGUI01000002.1:280976..282183+

>ATCC64974_8330-T1 ID=ATCC64974_8330-T1|Name=ATCC64974_8330-T1|organism=Aspergillus niger N402|type=CDS|length=1998bp|location=Sequence derived from alignment at OGUI01000002.1:280976..282183+ (Aspergillus niger N402)
ATGCCTCTCGACGGGGTGAAGAATGTTGTGCTGGTCCTCTCGGGCAAAGG
CGGCGTCGGCAAATCCAGCGTAACCCTGCAACTCGCCCTCGCGCTCACCC
TGCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTCACCGGCCCTTCA
ATCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTACCCAAGCGCCAGG
CGGTTGGCTTCCTGTTCCCGTTCACCCTTCCACCATCATCACCACACCCA
ATGCCTCCTCCACCTCACAACCAGATAATACAACAACAACGGCAACAGAA
ACAGAAGGTGGACGCGCAATAAAACACGGCTCTCTCCGCTGCATGTCCCT
CGGCTTCCTTTTACGTTCCCGGTCCGATGCCGTAATCTGGCGCGGGCCCA
AAAAGACAGCCATGATCCGCCAATTCCTCTCCGATGTGCTGTGGAATGAA
ACTGATTACTTGCTTATTGATACGCCTCCCGGAACTAGTGATGAGCATAT
TGCTCTTGCGGAGCAGCTCTTGACGCTTTGTACAATCGATGCTTCCTCTG
CAACTGGAATGCCTCGACTGGCTGGTGCGGTACTGGTCACTACACCACAG
GCGGTAGCAACGTCTGATGTACGGAAGGAGGTGAATTTCTGCGTTAAGAC
GAGGATTCCGATGCTGGGGGTGGTGGAGAATATGTCTGGTTATACGTGTC
CGTGCTGTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGGGGGCAGGTT
CTGGCAGAAGAGATGGGTGTAAGGTTTTTGGGAAAGGTGCCCGTTGACGT
TGGGTTTGGGGAGTTGGTGGAGGGGAAGATTGGTGGGGAGGAGGATAGTG
AGGATGAGGATGAGGATACTAATGGGGAGAAGAAGGAGGAAGAAGAGAAG
GATGAGAGGCCGCTAGTGGAAAGGTATCGGGAATGTTGGTCGTATGCGCG
GTTCGAGGACTTTTCGAAGACGTTGATTGCGGAGATTGAGGGGCAATGAA
TGCCTCTCGACGGGGTGAAGAATGTTGTGCTGGTCCTCTCGGGCAAAGGC
GGCGTCGGCAAATCCAGCGTAACCCTGCAACTCGCCCTCGCGCTCACCCT
GCAAGGCAAATCCGTTGGTATCCTGGACATCGATCTCACCGGCCCTTCAA
TCCCACGATTAGTCGGTCTCGAAGACGCAAAAATTACCCAAGCGCCAGGC
GGTTGGCTTCCTGTTCCCGTTCACCCTTCCACCATCATCACCACACCCAA
TGCCTCCTCCACCTCACAACCAGATAATACAACAACAACGGCAACAGAAA
CAGAAGGTGGACGCGCAATAAAACACGGCTCTCTCCGCTGCATGTCCCTC
GGCTTCCTTTTACGTTCCCGGTCCGATGCCGTAATCTGGCGCGGGCCCAA
AAAGACAGCCATGATCCGCCAATTCCTCTCCGATGTGCTGTGGAATGAAA
CTGATTACTTGCTTATTGATACGCCTCCCGGAACTAGTGATGAGCATATT
GCTCTTGCGGAGCAGCTCTTGACGCTTTGTACAATCGATGCTTCCTCTGC
AACTGGAATGCCTCGACTGGCTGGTGCGGTACTGGTCACTACACCACAGG
CGGTAGCAACGTCTGATGTACGGAAGGAGGTGAATTTCTGCGTTAAGACG
AGGATTCCGATGCTGGGGGTGGTGGAGAATATGTCTGGTTATACGTGTCC
GTGCTGTGGGGAGGTGACGAACCTGTTCTCGAGTGGTGGGGGGCAGGTTC
TGGCAGAAGAGATGGGTGTAAGGTTTTTGGGAAAGGTGCCCGTTGACGTT
GGGTTTGGGGAGTTGGTGGAGGGGAAGATTGGTGGGGAGGAGGATAGTGA
GGATGAGGATGAGGATACTAATGGGGAGAAGAAGGAGGAAGAAGAGAAGG
ATGAGAGGCCGCTAGTGGAAAGGTATCGGGAATGTTGGTCGTATGCGCGG
TTCGAGGACTTTTCGAAGACGTTGATTGCGGAGATTGAGGGGCAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CFD1ATCC64974_8330Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8330-T1.exon1ATCC64974_8330-T1.exon1Aspergillus niger N402exon
ATCC64974_8330-T1.exon2ATCC64974_8330-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8330-T1.cdsATCC64974_8330-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_8330-T1ATCC64974_8330-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR028600
DBxrefInterPro:IPR019591
DBxrefInterPro:IPR033756
DBxrefPFAM:PF01656
Productcytosolic Fe-S cluster assembly factor cfd1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:280976..282183 +
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