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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:88250..90262+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_11610-T1 ID=ATCC64974_11610-T1|Name=ATCC64974_11610-T1|organism=Aspergillus niger N402|type=mRNA|length=2013bp|location=Sequence derived from alignment at OGUI01000003.1:88250..90262+ (Aspergillus niger N402)
ATGGAGTTGGGGCAGGACCCAATTTACGATAACTTTGCCTTTGCATTTCC
CAATTTCGTTCCCTCTCAATTATTGGACACTGAGATCTCTCTCTCGGATC
TACTCGAGCAGTATCCTGCACAGGGGCAGGCGTCTCAGGGACCACGGCTG
TCTTCAACGCCAGCTGGTCCTCCTGCTCCCTCTCTCGACGACACAGCCGA
CTATCCTAGTGATCTTCCCGATTCAAAGGACCAACCACAGCACCGCCTGC
CATCGCTAGATGACCAGCCGCACAAAAGTGGCTTGGAGGCGCAACTCGAC
GCGGCAGGATGTCCGTGGGCAATCTCCGCGGGCGCGTACAAGACGATCGT
GGACAAACTGACCGCAAAGCGGACTGCCTTGATCGATTTCTCACTGCCAT
CCAGGTGTGCGCTCGTGCGATATTTGGAGGGCTACTTCCGAGGCTTTCAT
GACCATCTTCCGTTTCTTCATGTGCCGACCTTCCGTGCAGAGACCGTCGA
GCCCGAGCTCCTCCTCGCAATGGCGGCTGTCGGCGCCCTGCATCGCTTCG
AGCATCACAAGGGTCACCAGTTGTACGTCGCAGCGCGGTCCCTGATTGAC
CAGAACACACAGGATCGCCGTCGCAGACTGGTCGGGCAACTAGTCGGCCG
CTCACCAGGGTCTGCAGCATATGCCAGTCCTTTTTCAGACAGTCGCCGCG
GTTCGAGCAATCCGGCCAGTGCAAACGAGACGGCTGAAGATACTACCGGC
GAACTTCAGCAAGCACAAGCCTTGATCGTTCTGACAGCCATGAGCTCCTG
GGGTGAGGAAGTCCTCGCGCAGGATAGTCTAGCGATGAGCAGCCAGCTGG
CGGTGCTCGTGCGGACACTGGGAATTCACGAAACAGACAATGGCGCAGAT
GCCGAACTCAGCTGGCTGGCATGGGTGGCACACCAACAGCGGCGACGTAC
CTTCTTAATCGCATACATCGTATTTAATCTGCAGAGCATCATCTTCAATA
TTCCACCGCAGATTCTTACCAGCGAGGTGGCCGTGTGTTTGCCATCCTGT
GAAGCAGAATGGAGGGCTTCTTCACCCGCCGCGTGGGAGCGACATCGCGC
CGTGTCCCGGCTCCATGAACGCGGATTCACTTCGACGCTCAACGAACTTC
TCAACGGAAACGATATTACTGGTCATAGCCTTATCTCTCCCTTTTCCAAC
TACATCCTCATTCACGGCCTGGTACAGCGCATCTACTTTGAGCGACAAGC
CGCTGGTGGCAGTTTGCGTACTCCGCTCGTAGAATCCCTCGAAACAGCAC
TGAAGCACTGGCAATCCAGCTGGGAGAGCACCTGGGAGTCAAGTCTGGAC
CCATACTGTCCCAAGGGACCGTTGGGGTTCAACGCGACCGCACTGCTACG
GCTCGCCTACATCCGTTTGAATTGTCGGACGGGTCTCTGTCATGAGCTCC
TCTCCAGCGATTCGACGCGGCTCAAATCACTCATCTCCCCGACACCACCG
CTAGATCATATTAGTCGCTCCCCGGCCCTCAATCGTGCTATCCTGCAGTG
CATTCACGCCCTGAGCATCCCTGTGCGGGTGGGAATCCCCTACGTCGCGC
GCACGCAGACCTTGAGCTGGAGCGTACAGCACTCCATCTGCCACCTAGAG
TGCGCGGTGCTGTTGATACGGTGGATGCAGATGCTGGCTAGCGCCGTGGC
AGCACACGGGATGGGGAGTCTGCGGGAGGATGAACGGAAGCTGCTCCGCA
TGGCGGAGTACTTGATTCAGGAGACAAATGCCGTGGAGGGAAAGCAGGGC
AAGGAGGGAGAGAGTGAAGCGGAGAAGATCCAGCGGCTGGCGAGGATGAC
GGCGCAGGTCTGGGCTGAGATTTCGAGCGGGATTCATGTGTTTGATCTGG
TGCGGAGGATTGGGGAGGCGTTAAGAGGGATTGCGGACATGCTAGGAGGT
GAAGGGGAAGGAGGTAGTGAGACATATTATCTCTCCTCCAGCTCTAGCAG
TGTAAGCCGGTAA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:88250..90262+ >ATCC64974_11610-T1 ID=ATCC64974_11610-T1|Name=ATCC64974_11610-T1|organism=Aspergillus niger N402|type=CDS|length=2013bp|location=Sequence derived from alignment at OGUI01000003.1:88250..90262+ (Aspergillus niger N402)
ATGGAGTTGGGGCAGGACCCAATTTACGATAACTTTGCCTTTGCATTTCC
CAATTTCGTTCCCTCTCAATTATTGGACACTGAGATCTCTCTCTCGGATC
TACTCGAGCAGTATCCTGCACAGGGGCAGGCGTCTCAGGGACCACGGCTG
TCTTCAACGCCAGCTGGTCCTCCTGCTCCCTCTCTCGACGACACAGCCGA
CTATCCTAGTGATCTTCCCGATTCAAAGGACCAACCACAGCACCGCCTGC
CATCGCTAGATGACCAGCCGCACAAAAGTGGCTTGGAGGCGCAACTCGAC
GCGGCAGGATGTCCGTGGGCAATCTCCGCGGGCGCGTACAAGACGATCGT
GGACAAACTGACCGCAAAGCGGACTGCCTTGATCGATTTCTCACTGCCAT
CCAGGTGTGCGCTCGTGCGATATTTGGAGGGCTACTTCCGAGGCTTTCAT
GACCATCTTCCGTTTCTTCATGTGCCGACCTTCCGTGCAGAGACCGTCGA
GCCCGAGCTCCTCCTCGCAATGGCGGCTGTCGGCGCCCTGCATCGCTTCG
AGCATCACAAGGGTCACCAGTTGTACGTCGCAGCGCGGTCCCTGATTGAC
CAGAACACACAGGATCGCCGTCGCAGACTGGTCGGGCAACTAGTCGGCCG
CTCACCAGGGTCTGCAGCATATGCCAGTCCTTTTTCAGACAGTCGCCGCG
GTTCGAGCAATCCGGCCAGTGCAAACGAGACGGCTGAAGATACTACCGGC
GAACTTCAGCAAGCACAAGCCTTGATCGTTCTGACAGCCATGAGCTCCTG
GGGTGAGGAAGTCCTCGCGCAGGATAGTCTAGCGATGAGCAGCCAGCTGG
CGGTGCTCGTGCGGACACTGGGAATTCACGAAACAGACAATGGCGCAGAT
GCCGAACTCAGCTGGCTGGCATGGGTGGCACACCAACAGCGGCGACGTAC
CTTCTTAATCGCATACATCGTATTTAATCTGCAGAGCATCATCTTCAATA
TTCCACCGCAGATTCTTACCAGCGAGGTGGCCGTGTGTTTGCCATCCTGT
GAAGCAGAATGGAGGGCTTCTTCACCCGCCGCGTGGGAGCGACATCGCGC
CGTGTCCCGGCTCCATGAACGCGGATTCACTTCGACGCTCAACGAACTTC
TCAACGGAAACGATATTACTGGTCATAGCCTTATCTCTCCCTTTTCCAAC
TACATCCTCATTCACGGCCTGGTACAGCGCATCTACTTTGAGCGACAAGC
CGCTGGTGGCAGTTTGCGTACTCCGCTCGTAGAATCCCTCGAAACAGCAC
TGAAGCACTGGCAATCCAGCTGGGAGAGCACCTGGGAGTCAAGTCTGGAC
CCATACTGTCCCAAGGGACCGTTGGGGTTCAACGCGACCGCACTGCTACG
GCTCGCCTACATCCGTTTGAATTGTCGGACGGGTCTCTGTCATGAGCTCC
TCTCCAGCGATTCGACGCGGCTCAAATCACTCATCTCCCCGACACCACCG
CTAGATCATATTAGTCGCTCCCCGGCCCTCAATCGTGCTATCCTGCAGTG
CATTCACGCCCTGAGCATCCCTGTGCGGGTGGGAATCCCCTACGTCGCGC
GCACGCAGACCTTGAGCTGGAGCGTACAGCACTCCATCTGCCACCTAGAG
TGCGCGGTGCTGTTGATACGGTGGATGCAGATGCTGGCTAGCGCCGTGGC
AGCACACGGGATGGGGAGTCTGCGGGAGGATGAACGGAAGCTGCTCCGCA
TGGCGGAGTACTTGATTCAGGAGACAAATGCCGTGGAGGGAAAGCAGGGC
AAGGAGGGAGAGAGTGAAGCGGAGAAGATCCAGCGGCTGGCGAGGATGAC
GGCGCAGGTCTGGGCTGAGATTTCGAGCGGGATTCATGTGTTTGATCTGG
TGCGGAGGATTGGGGAGGCGTTAAGAGGGATTGCGGACATGCTAGGAGGT
GAAGGGGAAGGAGGTAGTGAGACATATTATCTCTCCTCCAGCTCTAGCAG
TGTAAGCCGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_11610-T1 | ATCC64974_11610-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000031.1 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:88250..90262 + |
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