|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:174787..175429- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_11930-T1 ID=ATCC64974_11930-T1|Name=ATCC64974_11930-T1|organism=Aspergillus niger N402|type=mRNA|length=643bp|location=Sequence derived from alignment at OGUI01000003.1:174787..175429- (Aspergillus niger N402)
ATGCGTTATCTCTCCCTGGTATCCGCCCTCGCAGCCACCGCGCTGGCCCA
GACACCCCCGGGCAGCTACCCATCCACCAACAAGAACTTCGGTGTCGCCT
TTCCCAATGCCACTGTGACCCCTGGTACCTGGGTGAGCCCAGATGGTACG
TACTCTGTCTCTTCACAGCTTTATAGCCTTAACACTAATTACAAGTGTAG
ACGTCACCAGCCAGCCGGCCGTGTATGTCACCGACAAGCTAAACAAGGAT
GCCACCTACATGATCTTCATGCTTGATCTCAACATCCCTGATTCGGACGT
CACCACCGCCGCCTACTACAACACTCTTGTCCCCGGCCTGGCTGTCAACA
CCACCACCCGCCTGCACTGGTGGGGTGGCAACTACACTATTCAGAACGGA
CGCTTCGTCAACGCCAGCGATGCCCTGGCTGAGTATACGGCTCCTCGCCC
CCGCGACAGCACCAACCACACCTACACGCTGTATCTTTTTGATCAGCCGG
AGGGATATGTGCCTCCCGAGAAGGCCTTGGACGGGACTTATTACTCCCAG
ACCACGTCGGCGCGGTTCAACTTCACCCTGGAGCCGATTGTGAAGGCTGT
TGGGGGGCCAATTGCGGCGAATTACTTCTTGAGTGATGCTTAG back to topCoding sequence (CDS) from alignment at OGUI01000003.1:174787..175429- >ATCC64974_11930-T1 ID=ATCC64974_11930-T1|Name=ATCC64974_11930-T1|organism=Aspergillus niger N402|type=CDS|length=1176bp|location=Sequence derived from alignment at OGUI01000003.1:174787..175429- (Aspergillus niger N402)
ACGTCACCAGCCAGCCGGCCGTGTATGTCACCGACAAGCTAAACAAGGAT
GCCACCTACATGATCTTCATGCTTGATCTCAACATCCCTGATTCGGACGT
CACCACCGCCGCCTACTACAACACTCTTGTCCCCGGCCTGGCTGTCAACA
CCACCACCCGCCTGCACTGGTGGGGTGGCAACTACACTATTCAGAACGGA
CGCTTCGTCAACGCCAGCGATGCCCTGGCTGAGTATACGGCTCCTCGCCC
CCGCGACAGCACCAACCACACCTACACGCTGTATCTTTTTGATCAGCCGG
AGGGATATGTGCCTCCCGAGAAGGCCTTGGACGGGACTTATTACTCCCAG
ACCACGTCGGCGCGGTTCAACTTCACCCTGGAGCCGATTGTGAAGGCTGT
TGGGGGGCCAATTGCGGCGAATTACTTCTTGAGTGATGCTTAGATGCGTT
ATCTCTCCCTGGTATCCGCCCTCGCAGCCACCGCGCTGGCCCAGACACCC
CCGGGCAGCTACCCATCCACCAACAAGAACTTCGGTGTCGCCTTTCCCAA
TGCCACTGTGACCCCTGGTACCTGGGTGAGCCCAGATGACGTCACCAGCC
AGCCGGCCGTGTATGTCACCGACAAGCTAAACAAGGATGCCACCTACATG
ATCTTCATGCTTGATCTCAACATCCCTGATTCGGACGTCACCACCGCCGC
CTACTACAACACTCTTGTCCCCGGCCTGGCTGTCAACACCACCACCCGCC
TGCACTGGTGGGGTGGCAACTACACTATTCAGAACGGACGCTTCGTCAAC
GCCAGCGATGCCCTGGCTGAGTATACGGCTCCTCGCCCCCGCGACAGCAC
CAACCACACCTACACGCTGTATCTTTTTGATCAGCCGGAGGGATATGTGC
CTCCCGAGAAGGCCTTGGACGGGACTTATTACTCCCAGACCACGTCGGCG
CGGTTCAACTTCACCCTGGAGCCGATTGTGAAGGCTGTTGGGGGGCCAAT
TGCGGCGAATTACTTCTTGAGTGATGCTTAGATGCGTTATCTCTCCCTGG
TATCCGCCCTCGCAGCCACCGCGCTGGCCCAGACACCCCCGGGCAGCTAC
CCATCCACCAACAAGAACTTCGGTGTCGCCTTTCCCAATGCCACTGTGAC
CCCTGGTACCTGGGTGAGCCCAGATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_11930-T1 | ATCC64974_11930-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-16) |
| DBxref | InterPro:IPR035810 |
| DBxref | InterPro:IPR008914 |
| DBxref | InterPro:IPR036610 |
| DBxref | PFAM:PF01161 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:174787..175429 - |
|
