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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:1420949..1421871+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_15900-T1 ID=ATCC64974_15900-T1|Name=ATCC64974_15900-T1|organism=Aspergillus niger N402|type=mRNA|length=923bp|location=Sequence derived from alignment at OGUI01000003.1:1420949..1421871+ (Aspergillus niger N402)
ATGGGGATGGCACTCAGCTCGAAGATTCAAACGATTGATGATGAGAATAC
TTCTCCTACAGAGAATAACTCAAGGTATGCATTAGATATCCCTAATCAGT
TAGGAACTGCCCTTATAAAGTGACATTGACTCATTCCCACCACCCACAAA
CAGACCAACAGACCATCCCACACCATCAAGACAACCTCATCAACACTCAA
CACCAACAAAATCACCACCCCACAACCGCCACCGTCTACACGAATTGTAC
GAACAATTCCCCCCAAGCAAACCTCCTCCATCAATACGACCCCCTAACCC
ACACACCTCCAGCTTCATCGGCAAAACCGGCGGCCAAATCTTCCACGAAA
TGATGCGCCTCCACAACGTCAAACACATCTGTAAGCCTGTCTCTCCCCTT
CCCTCTTTCCAACTATACACCCTCCCAACTAACCACCACCACCACCATCT
CCCTCCCTTTAGTCGGCTACCCAGGCGGCACCATCCTCCCCATCCTGGAC
GCGCTCTACGCCTCCCCGCATCTAACATTCATCCTCCCCAAACACGAGCA
ATCAGCCGGCCACATGGCCGAAGGCTACGCGCGCGCCTCGATCTCCTCAT
ATCCCACCCCCGGCATCGTCCTCGTAACCTCCGGCCCCGGCGCAACGAAT
CTCATCACGCCGCTGCAGAACGCCCTCAGCGACGGCACCCCGCTCATTGC
TTTCTGTGGACAGGTGGCGACGAGCGCCATCGGGAAGGACGGGTTCCAGG
AGGCGGATGTGTTGGGGATGACGAGATTTTGTACGAAGTGGAATGTGGGC
GTTAAGCATGTGAGGGAGTTGCCGCAGAGGATTGAGGAGGCGTTTTGGGT
GGCGTTGAGTGGGAGGATGGGGCCTGTGGTCGTGGAGGTGCCCAAGGATG
TGGGGGCGGGGGTTTATTCTTGA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:1420949..1421871+ >ATCC64974_15900-T1 ID=ATCC64974_15900-T1|Name=ATCC64974_15900-T1|organism=Aspergillus niger N402|type=CDS|length=2784bp|location=Sequence derived from alignment at OGUI01000003.1:1420949..1421871+ (Aspergillus niger N402)
ATGGGGATGGCACTCAGCTCGAAGATTCAAACGATTGATGATGAGAATAC
TTCTCCTACAGAGAATAACTCAAGACCAACAGACCATCCCACACCATCAA
GACAACCTCATCAACACTCAACACCAACAAAATCACCACCCCACAACCGC
CACCGTCTACACGAATTCTTCATCGGCAAAACCGGCGGCCAAATCTTCCA
CGAAATGATGCGCCTCCACAACGTCAAACACATCTTCGGCTACCCAGGCG
GCACCATCCTCCCCATCCTGGACGCGCTCTACGCCTCCCCGCATCTAACA
TTCATCCTCCCCAAACACGAGCAATCAGCCGGCCACATGGCCGAAGGCTA
CGCGCGCGCCTCGATCTCCTCATATCCCACCCCCGGCATCGTCCTCGTAA
CCTCCGGCCCCGGCGCAACGAATCTCATCACGCCGCTGCAGAACGCCCTC
AGCGACGGCACCCCGCTCATTGCTTTCTGTGGACAGGTGGCGACGAGCGC
CATCGGGAAGGACGGGTTCCAGGAGGCGGATGTGTTGGGGATGACGAGAT
TTTGTACGAAGTGGAATGTGGGCGTTAAGCATGTGAGGGAGTTGCCGCAG
AGGATTGAGGAGGCGTTTTGGGTGGCGTTGAGTGGGAGGATGGGGCCTGT
GGTCGTGGAGGTGCCCAAGGATGTGGGGGCGGGGGTTTATTCTTGAATGG
GGATGGCACTCAGCTCGAAGATTCAAACGATTGATGATGAGAATACTTCT
CCTACAGAGAATAACTCAAGACCAACAGACCATCCCACACCATCAAGACA
ACCTCATCAACACTCAACACCAACAAAATCACCACCCCACAACCGCCACC
GTCTACACGAATTCTTCATCGGCAAAACCGGCGGCCAAATCTTCCACGAA
ATGATGCGCCTCCACAACGTCAAACACATCTTCGGCTACCCAGGCGGCAC
CATCCTCCCCATCCTGGACGCGCTCTACGCCTCCCCGCATCTAACATTCA
TCCTCCCCAAACACGAGCAATCAGCCGGCCACATGGCCGAAGGCTACGCG
CGCGCCTCGATCTCCTCATATCCCACCCCCGGCATCGTCCTCGTAACCTC
CGGCCCCGGCGCAACGAATCTCATCACGCCGCTGCAGAACGCCCTCAGCG
ACGGCACCCCGCTCATTGCTTTCTGTGGACAGGTGGCGACGAGCGCCATC
GGGAAGGACGGGTTCCAGGAGGCGGATGTGTTGGGGATGACGAGATTTTG
TACGAAGTGGAATGTGGGCGTTAAGCATGTGAGGGAGTTGCCGCAGAGGA
TTGAGGAGGCGTTTTGGGTGGCGTTGAGTGGGAGGATGGGGCCTGTGGTC
GTGGAGGTGCCCAAGGATGTGGGGGCGGGGGTTTATTCTTGAATGGGGAT
GGCACTCAGCTCGAAGATTCAAACGATTGATGATGAGAATACTTCTCCTA
CAGAGAATAACTCAAGACCAACAGACCATCCCACACCATCAAGACAACCT
CATCAACACTCAACACCAACAAAATCACCACCCCACAACCGCCACCGTCT
ACACGAATTCTTCATCGGCAAAACCGGCGGCCAAATCTTCCACGAAATGA
TGCGCCTCCACAACGTCAAACACATCTTCGGCTACCCAGGCGGCACCATC
CTCCCCATCCTGGACGCGCTCTACGCCTCCCCGCATCTAACATTCATCCT
CCCCAAACACGAGCAATCAGCCGGCCACATGGCCGAAGGCTACGCGCGCG
CCTCGATCTCCTCATATCCCACCCCCGGCATCGTCCTCGTAACCTCCGGC
CCCGGCGCAACGAATCTCATCACGCCGCTGCAGAACGCCCTCAGCGACGG
CACCCCGCTCATTGCTTTCTGTGGACAGGTGGCGACGAGCGCCATCGGGA
AGGACGGGTTCCAGGAGGCGGATGTGTTGGGGATGACGAGATTTTGTACG
AAGTGGAATGTGGGCGTTAAGCATGTGAGGGAGTTGCCGCAGAGGATTGA
GGAGGCGTTTTGGGTGGCGTTGAGTGGGAGGATGGGGCCTGTGGTCGTGG
AGGTGCCCAAGGATGTGGGGGCGGGGGTTTATTCTTGAATGGGGATGGCA
CTCAGCTCGAAGATTCAAACGATTGATGATGAGAATACTTCTCCTACAGA
GAATAACTCAAGACCAACAGACCATCCCACACCATCAAGACAACCTCATC
AACACTCAACACCAACAAAATCACCACCCCACAACCGCCACCGTCTACAC
GAATTCTTCATCGGCAAAACCGGCGGCCAAATCTTCCACGAAATGATGCG
CCTCCACAACGTCAAACACATCTTCGGCTACCCAGGCGGCACCATCCTCC
CCATCCTGGACGCGCTCTACGCCTCCCCGCATCTAACATTCATCCTCCCC
AAACACGAGCAATCAGCCGGCCACATGGCCGAAGGCTACGCGCGCGCCTC
GATCTCCTCATATCCCACCCCCGGCATCGTCCTCGTAACCTCCGGCCCCG
GCGCAACGAATCTCATCACGCCGCTGCAGAACGCCCTCAGCGACGGCACC
CCGCTCATTGCTTTCTGTGGACAGGTGGCGACGAGCGCCATCGGGAAGGA
CGGGTTCCAGGAGGCGGATGTGTTGGGGATGACGAGATTTTGTACGAAGT
GGAATGTGGGCGTTAAGCATGTGAGGGAGTTGCCGCAGAGGATTGAGGAG
GCGTTTTGGGTGGCGTTGAGTGGGAGGATGGGGCCTGTGGTCGTGGAGGT
GCCCAAGGATGTGGGGGCGGGGGTTTATTCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030976 | thiamine pyrophosphate binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_15900-T1 | ATCC64974_15900-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029061 |
| DBxref | InterPro:IPR012001 |
| DBxref | PFAM:PF02776 |
| Product | threonine deaminase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:1420949..1421871 + |
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