|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:1806086..1807473- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_17110-T1 ID=ATCC64974_17110-T1|Name=ATCC64974_17110-T1|organism=Aspergillus niger N402|type=mRNA|length=1388bp|location=Sequence derived from alignment at OGUI01000003.1:1806086..1807473- (Aspergillus niger N402)
ATGCTTCAAACGCAGACTCAGCACGTCTTTTCCCACCAGCACCAGTATCC
GCAGGCTGATCCATCCTGGCTGCAGCAACAGCAGCAGCAGCATCATCAAA
CCCACCCGCACCAGGCTCAGCAACCGCATTCTTCGTTGGTCGCCCAACAG
CATGCCCAAGTCCAGGCGGCTGCAGCCGCCGCTGCAGCTGCTCAACAACA
ACACTATACTCGCATAGCCATGGCTGGGAACGCCGGTGCCGGTAATTCCG
CTCAAGGGGCTGGTGCAGGGGGCATTGGTGGGGATGGTGCTTTGCCCGGT
GCGGTGTCCGTGATGGATGGTGGCATCAGTGATGAGAATCGGAAAGTTTT
CATCTGGGTCGCAGAACTCCTCGATCCGAGTCGCAGAGAAGCAGCTCTCA
TGGAGCTTAGCAAGAAGAGAGAGCAAGTGCCGGAACTTGCGTTGGTTATC
TGGCACTCTTTCGGTACGGAAACCCCCCTTTGATCGGCTTTGTTGGTGGC
GACTAACGGGCGTTTTTTCAGGCGTCATGACCGCTTTACTCCAGGAAATT
ATCTCTGTATACCCGTTGTTGAACCCTTCGCAACTGACTGCGGCTGCATC
AAATCGAGTTTGCAATGCGCTTGCTCTCTTGCAGTGTGTGGCTTCCCACA
ACGAGACTCGCACCTTATTTCTAAATGGTACGCAGCCGTCACCTAGGAGC
CATCCACCCCACCCTTCGTTTCCAAGTAGTGTGTGCTTTGACTCACAAAA
TCTCTTTCGCAACAGCTCACATTCCTCTGTTTCTCTATCCTTTCCTCAAC
ACAACGTCAAAGTCGCGGCCCTTCGAGTATCTCCGCCTCACCTCGCTCGG
CGTAATCGGAGCGTTGGTCAAGAATGACTCATCCGATGTCATCAACTTCC
TCCTTACCACAGAGATCATCCCTCTTTGCCTACGAATTATGGAGACCGGC
TCAGAACTTAGCAAGACCGTTGCAATTTTCATCGTGCAGAAGATTCTCCT
CGACGACATCGGCCTCGCGTATATTTGCGCAACGTATGAGAGGTTCTATG
CAGTTGGAACCGTTCTGAGTAATATGGTTACTCAACTTGTTGAGCAACAG
ACAGTACGGCTTCTCAAGCATGTAGTGCGCTGCTTCCTTCGGTGAGTCCT
GCCACGATTTTCCTTGTATCGCGTAACTCGGTTTGGTTCTTCAAATGCTG
ACTTCTGTAGCTTGAGTGATAACAGCAGGGCGCGAGAGGCGTTGCGTCAA
TGCCTTCCCGAACCTTTGCGCGATGCGACATTCTCCTCCGTACTCCGCGA
CGACGCCGCCACTAAGCGCTGCTTGGCACAGCTTCTCATCAACCTTTCGG
ATAACGTCTCCGATGGCGCACCTGGTGTTGCGATGTAA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:1806086..1807473- >ATCC64974_17110-T1 ID=ATCC64974_17110-T1|Name=ATCC64974_17110-T1|organism=Aspergillus niger N402|type=CDS|length=4692bp|location=Sequence derived from alignment at OGUI01000003.1:1806086..1807473- (Aspergillus niger N402)
CTTGAGTGATAACAGCAGGGCGCGAGAGGCGTTGCGTCAATGCCTTCCCG
AACCTTTGCGCGATGCGACATTCTCCTCCGTACTCCGCGACGACGCCGCC
ACTAAGCGCTGCTTGGCACAGCTTCTCATCAACCTTTCGGATAACGTCTC
CGATGGCGCACCTGGTGTTGCGATGTAACTCACATTCCTCTGTTTCTCTA
TCCTTTCCTCAACACAACGTCAAAGTCGCGGCCCTTCGAGTATCTCCGCC
TCACCTCGCTCGGCGTAATCGGAGCGTTGGTCAAGAATGACTCATCCGAT
GTCATCAACTTCCTCCTTACCACAGAGATCATCCCTCTTTGCCTACGAAT
TATGGAGACCGGCTCAGAACTTAGCAAGACCGTTGCAATTTTCATCGTGC
AGAAGATTCTCCTCGACGACATCGGCCTCGCGTATATTTGCGCAACGTAT
GAGAGGTTCTATGCAGTTGGAACCGTTCTGAGTAATATGGTTACTCAACT
TGTTGAGCAACAGACAGTACGGCTTCTCAAGCATGTAGTGCGCTGCTTCC
TTCGGCGTCATGACCGCTTTACTCCAGGAAATTATCTCTGTATACCCGTT
GTTGAACCCTTCGCAACTGACTGCGGCTGCATCAAATCGAGTTTGCAATG
CGCTTGCTCTCTTGCAGTGTGTGGCTTCCCACAACGAGACTCGCACCTTA
TTTCTAAATGATGCTTCAAACGCAGACTCAGCACGTCTTTTCCCACCAGC
ACCAGTATCCGCAGGCTGATCCATCCTGGCTGCAGCAACAGCAGCAGCAG
CATCATCAAACCCACCCGCACCAGGCTCAGCAACCGCATTCTTCGTTGGT
CGCCCAACAGCATGCCCAAGTCCAGGCGGCTGCAGCCGCCGCTGCAGCTG
CTCAACAACAACACTATACTCGCATAGCCATGGCTGGGAACGCCGGTGCC
GGTAATTCCGCTCAAGGGGCTGGTGCAGGGGGCATTGGTGGGGATGGTGC
TTTGCCCGGTGCGGTGTCCGTGATGGATGGTGGCATCAGTGATGAGAATC
GGAAAGTTTTCATCTGGGTCGCAGAACTCCTCGATCCGAGTCGCAGAGAA
GCAGCTCTCATGGAGCTTAGCAAGAAGAGAGAGCAAGTGCCGGAACTTGC
GTTGGTTATCTGGCACTCTTTCGCTTGAGTGATAACAGCAGGGCGCGAGA
GGCGTTGCGTCAATGCCTTCCCGAACCTTTGCGCGATGCGACATTCTCCT
CCGTACTCCGCGACGACGCCGCCACTAAGCGCTGCTTGGCACAGCTTCTC
ATCAACCTTTCGGATAACGTCTCCGATGGCGCACCTGGTGTTGCGATGTA
ACTCACATTCCTCTGTTTCTCTATCCTTTCCTCAACACAACGTCAAAGTC
GCGGCCCTTCGAGTATCTCCGCCTCACCTCGCTCGGCGTAATCGGAGCGT
TGGTCAAGAATGACTCATCCGATGTCATCAACTTCCTCCTTACCACAGAG
ATCATCCCTCTTTGCCTACGAATTATGGAGACCGGCTCAGAACTTAGCAA
GACCGTTGCAATTTTCATCGTGCAGAAGATTCTCCTCGACGACATCGGCC
TCGCGTATATTTGCGCAACGTATGAGAGGTTCTATGCAGTTGGAACCGTT
CTGAGTAATATGGTTACTCAACTTGTTGAGCAACAGACAGTACGGCTTCT
CAAGCATGTAGTGCGCTGCTTCCTTCGGCGTCATGACCGCTTTACTCCAG
GAAATTATCTCTGTATACCCGTTGTTGAACCCTTCGCAACTGACTGCGGC
TGCATCAAATCGAGTTTGCAATGCGCTTGCTCTCTTGCAGTGTGTGGCTT
CCCACAACGAGACTCGCACCTTATTTCTAAATGATGCTTCAAACGCAGAC
TCAGCACGTCTTTTCCCACCAGCACCAGTATCCGCAGGCTGATCCATCCT
GGCTGCAGCAACAGCAGCAGCAGCATCATCAAACCCACCCGCACCAGGCT
CAGCAACCGCATTCTTCGTTGGTCGCCCAACAGCATGCCCAAGTCCAGGC
GGCTGCAGCCGCCGCTGCAGCTGCTCAACAACAACACTATACTCGCATAG
CCATGGCTGGGAACGCCGGTGCCGGTAATTCCGCTCAAGGGGCTGGTGCA
GGGGGCATTGGTGGGGATGGTGCTTTGCCCGGTGCGGTGTCCGTGATGGA
TGGTGGCATCAGTGATGAGAATCGGAAAGTTTTCATCTGGGTCGCAGAAC
TCCTCGATCCGAGTCGCAGAGAAGCAGCTCTCATGGAGCTTAGCAAGAAG
AGAGAGCAAGTGCCGGAACTTGCGTTGGTTATCTGGCACTCTTTCGCTTG
AGTGATAACAGCAGGGCGCGAGAGGCGTTGCGTCAATGCCTTCCCGAACC
TTTGCGCGATGCGACATTCTCCTCCGTACTCCGCGACGACGCCGCCACTA
AGCGCTGCTTGGCACAGCTTCTCATCAACCTTTCGGATAACGTCTCCGAT
GGCGCACCTGGTGTTGCGATGTAACTCACATTCCTCTGTTTCTCTATCCT
TTCCTCAACACAACGTCAAAGTCGCGGCCCTTCGAGTATCTCCGCCTCAC
CTCGCTCGGCGTAATCGGAGCGTTGGTCAAGAATGACTCATCCGATGTCA
TCAACTTCCTCCTTACCACAGAGATCATCCCTCTTTGCCTACGAATTATG
GAGACCGGCTCAGAACTTAGCAAGACCGTTGCAATTTTCATCGTGCAGAA
GATTCTCCTCGACGACATCGGCCTCGCGTATATTTGCGCAACGTATGAGA
GGTTCTATGCAGTTGGAACCGTTCTGAGTAATATGGTTACTCAACTTGTT
GAGCAACAGACAGTACGGCTTCTCAAGCATGTAGTGCGCTGCTTCCTTCG
GCGTCATGACCGCTTTACTCCAGGAAATTATCTCTGTATACCCGTTGTTG
AACCCTTCGCAACTGACTGCGGCTGCATCAAATCGAGTTTGCAATGCGCT
TGCTCTCTTGCAGTGTGTGGCTTCCCACAACGAGACTCGCACCTTATTTC
TAAATGATGCTTCAAACGCAGACTCAGCACGTCTTTTCCCACCAGCACCA
GTATCCGCAGGCTGATCCATCCTGGCTGCAGCAACAGCAGCAGCAGCATC
ATCAAACCCACCCGCACCAGGCTCAGCAACCGCATTCTTCGTTGGTCGCC
CAACAGCATGCCCAAGTCCAGGCGGCTGCAGCCGCCGCTGCAGCTGCTCA
ACAACAACACTATACTCGCATAGCCATGGCTGGGAACGCCGGTGCCGGTA
ATTCCGCTCAAGGGGCTGGTGCAGGGGGCATTGGTGGGGATGGTGCTTTG
CCCGGTGCGGTGTCCGTGATGGATGGTGGCATCAGTGATGAGAATCGGAA
AGTTTTCATCTGGGTCGCAGAACTCCTCGATCCGAGTCGCAGAGAAGCAG
CTCTCATGGAGCTTAGCAAGAAGAGAGAGCAAGTGCCGGAACTTGCGTTG
GTTATCTGGCACTCTTTCGCTTGAGTGATAACAGCAGGGCGCGAGAGGCG
TTGCGTCAATGCCTTCCCGAACCTTTGCGCGATGCGACATTCTCCTCCGT
ACTCCGCGACGACGCCGCCACTAAGCGCTGCTTGGCACAGCTTCTCATCA
ACCTTTCGGATAACGTCTCCGATGGCGCACCTGGTGTTGCGATGTAACTC
ACATTCCTCTGTTTCTCTATCCTTTCCTCAACACAACGTCAAAGTCGCGG
CCCTTCGAGTATCTCCGCCTCACCTCGCTCGGCGTAATCGGAGCGTTGGT
CAAGAATGACTCATCCGATGTCATCAACTTCCTCCTTACCACAGAGATCA
TCCCTCTTTGCCTACGAATTATGGAGACCGGCTCAGAACTTAGCAAGACC
GTTGCAATTTTCATCGTGCAGAAGATTCTCCTCGACGACATCGGCCTCGC
GTATATTTGCGCAACGTATGAGAGGTTCTATGCAGTTGGAACCGTTCTGA
GTAATATGGTTACTCAACTTGTTGAGCAACAGACAGTACGGCTTCTCAAG
CATGTAGTGCGCTGCTTCCTTCGGCGTCATGACCGCTTTACTCCAGGAAA
TTATCTCTGTATACCCGTTGTTGAACCCTTCGCAACTGACTGCGGCTGCA
TCAAATCGAGTTTGCAATGCGCTTGCTCTCTTGCAGTGTGTGGCTTCCCA
CAACGAGACTCGCACCTTATTTCTAAATGATGCTTCAAACGCAGACTCAG
CACGTCTTTTCCCACCAGCACCAGTATCCGCAGGCTGATCCATCCTGGCT
GCAGCAACAGCAGCAGCAGCATCATCAAACCCACCCGCACCAGGCTCAGC
AACCGCATTCTTCGTTGGTCGCCCAACAGCATGCCCAAGTCCAGGCGGCT
GCAGCCGCCGCTGCAGCTGCTCAACAACAACACTATACTCGCATAGCCAT
GGCTGGGAACGCCGGTGCCGGTAATTCCGCTCAAGGGGCTGGTGCAGGGG
GCATTGGTGGGGATGGTGCTTTGCCCGGTGCGGTGTCCGTGATGGATGGT
GGCATCAGTGATGAGAATCGGAAAGTTTTCATCTGGGTCGCAGAACTCCT
CGATCCGAGTCGCAGAGAAGCAGCTCTCATGGAGCTTAGCAAGAAGAGAG
AGCAAGTGCCGGAACTTGCGTTGGTTATCTGGCACTCTTTCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_17110-T1 | ATCC64974_17110-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263Q8J |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR011989 |
| DBxref | PFAM:PF04078 |
| Product | Cell differentiation protein rcd1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:1806086..1807473 - |
|
