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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:3265458..3266351- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_21780-T1 ID=ATCC64974_21780-T1|Name=ATCC64974_21780-T1|organism=Aspergillus niger N402|type=mRNA|length=894bp|location=Sequence derived from alignment at OGUI01000003.1:3265458..3266351- (Aspergillus niger N402)
ATGCTCTCTTTTAGTGTTCTAGGCGGCCTTTCATCTTGCTGTCTCTTCAC
TCCTGCTATCTCCGCCATCGGGCACTGGTTCAATGTTCGCCGTGGCATTG
CCACCGGAATTGCCTGTACAGCTGGCGGACTCGGGGGCGTCTTCTTTCCC
CTCATCATATTGTATGTCGCCCCGAAGCTAGGGTTCGCGTGGGCCATGCG
CATCATTGGAATAATCTGCTTTGTGCTATGCGGCTTTGCATGCCTTCTTC
TGAAGACACGGCTCAAGCCCGACGCAAAGCGTGGCGTGGCGATCGACCTT
CGCGCCCTGCGAGAACCCAACTATGCCCTCACCACGCTTGCAGTATGGAT
GGTCGAATTTGCTGTATTCGTACCTTATACCTATCTCTGCTCTTACGGTT
TATATGCCAATATTGGAGAGTCACTCTCGTACAAACTGTGCATCTTCCTC
AATGTCGGAGCCATCCCCGGACGCGCATTCCCGGGACTTCTCGCCGATAG
ACTCGGACGGTTCAACGTGATGGCCTTCACTGCATTAGTTTGTGCTATTA
TGACACTTGCATTGTGGTATAATGCTGGCACGAACGATGCTGCCATTATC
GCGTACTCGGTTATGTTCGGTTTCTGGAGTGGCGCGGCTATCAGCTTGAC
ACCCGTTTGTATCGCACAGGTATGTCGGACTGAGGACATCGGCAAGCGAA
ACGGAACGACGTTCACTCTGGTGAGCTTTGGGACCCTGACTGCAATTCCT
ATTGCGGGAGCGATACAAGAAAGGGATGGGGGTGCTTTCTGGGGACTGAT
ACTTTTTGGTGGGATCTTGTATCTTGCGGCGTGTGCTGCATTCGTGGTTG
CGCGGGGCGTTGCTGGTGGATGGAGGCTGAGAACCAAGTTTTAG back to topCoding sequence (CDS) from alignment at OGUI01000003.1:3265458..3266351- >ATCC64974_21780-T1 ID=ATCC64974_21780-T1|Name=ATCC64974_21780-T1|organism=Aspergillus niger N402|type=CDS|length=894bp|location=Sequence derived from alignment at OGUI01000003.1:3265458..3266351- (Aspergillus niger N402)
ATGCTCTCTTTTAGTGTTCTAGGCGGCCTTTCATCTTGCTGTCTCTTCAC
TCCTGCTATCTCCGCCATCGGGCACTGGTTCAATGTTCGCCGTGGCATTG
CCACCGGAATTGCCTGTACAGCTGGCGGACTCGGGGGCGTCTTCTTTCCC
CTCATCATATTGTATGTCGCCCCGAAGCTAGGGTTCGCGTGGGCCATGCG
CATCATTGGAATAATCTGCTTTGTGCTATGCGGCTTTGCATGCCTTCTTC
TGAAGACACGGCTCAAGCCCGACGCAAAGCGTGGCGTGGCGATCGACCTT
CGCGCCCTGCGAGAACCCAACTATGCCCTCACCACGCTTGCAGTATGGAT
GGTCGAATTTGCTGTATTCGTACCTTATACCTATCTCTGCTCTTACGGTT
TATATGCCAATATTGGAGAGTCACTCTCGTACAAACTGTGCATCTTCCTC
AATGTCGGAGCCATCCCCGGACGCGCATTCCCGGGACTTCTCGCCGATAG
ACTCGGACGGTTCAACGTGATGGCCTTCACTGCATTAGTTTGTGCTATTA
TGACACTTGCATTGTGGTATAATGCTGGCACGAACGATGCTGCCATTATC
GCGTACTCGGTTATGTTCGGTTTCTGGAGTGGCGCGGCTATCAGCTTGAC
ACCCGTTTGTATCGCACAGGTATGTCGGACTGAGGACATCGGCAAGCGAA
ACGGAACGACGTTCACTCTGGTGAGCTTTGGGACCCTGACTGCAATTCCT
ATTGCGGGAGCGATACAAGAAAGGGATGGGGGTGCTTTCTGGGGACTGAT
ACTTTTTGGTGGGATCTTGTATCTTGCGGCGTGTGCTGCATTCGTGGTTG
CGCGGGGCGTTGCTGGTGGATGGAGGCTGAGAACCAAGTTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_21780-T1 | ATCC64974_21780-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:3265458..3266351 - |
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