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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000004.1:539805..541101- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_28290-T1 ID=ATCC64974_28290-T1|Name=ATCC64974_28290-T1|organism=Aspergillus niger N402|type=mRNA|length=1297bp|location=Sequence derived from alignment at OGUI01000004.1:539805..541101- (Aspergillus niger N402)
ATGAAACCATACATCGGTATCCCAGCGGTGATAGTGCTCGTTCATCGTGC
TTGGTCGCGAAAGTCGCTGACCACCCCCGGCCTCATTGCGGCTGCGCTGA
CGGCCAGCGCCCATGCTCTTCATCCATGGTCCGCTCCTTTTGTCTTATTA
GGAGTATTCTACTTTGGGGGCACCAAAGTTACCAAGGTATATATCCTCTC
CAACATCGTCGATCCGCGGTTTGTAATTGCTAATCGCACACTTGCCAGGT
TAAACACGATGTCAAAGCTCGTTTGACGCTCTCCGCGACCGGCTCCGAGG
GCGGCGAGGGTCAACGTACCCACATCCAAGTCCTGGCGAACTCTGTTGTC
GCGACAGTGCTTGCTCTCCTACATACATATGTTCTGGCAGGGAAGCCTGC
GAGCGCAACACAGTGCTTTTCGAATGGTCATGATGTGGCGGATCTGTTGG
TCGTGGGAATAGTCGCGTAAGACTTACCTCTATTCCTTACCCTTTGTTAT
GCGCTTGCTGACAGGTCATCGTTGTAGGAACTACGCCGCTGTCGCCGCTG
ATACATACTCCTCCGAGCTTGGTATTCTGTCCAAGTCCAAACCCCGCCTG
ATCACCTCTCCCACGTTCCGCGTTGTCCCCCCCGGTACCAATGGCGGTGT
AACGGGCACCGGACTCCTAGCAGGAGTGGTGGGTGCATTTACAATTGCCG
TGTCATCCGCTGCTATTCTACCTTTCTGCTCCGAAGGCGATACTCTCTCG
ACACTCAAGAGCCGGGCTCAGTGGATTCTGGCTGTGACAATGTGGGGAGG
TTTGGGCAGTGTGCTGGATAGTGTCTTGGGTGGATTGCTCCAGGCCAGCG
TGGTGGACAAGAGAACAGGAAAGGTCATCGAAGGAGCCGGTGGCCAGAAG
GTCAGCACATGATTAACATCTACCGGATTGTTAGGAAGAGGATAGTGCTG
ATATTGTCATGCAGGTCCTTGTTCACCCCTCTTCTACTAAGCCCGGCGTC
CCAGCTGATACCACCGGTCTGAAGCCTGCCGGATCAAGCTCGAGTGCGCA
GGTACACGCCACAGAGGCAGTCGCTAACACTGCCACTCTGAAAGGAACCA
GGGCTACTGGAACGTCGACGGGGACGTCCGCAGGAGAAATTGAATCGGGA
CACGAAAGCCGGAGGGTAGAGAGTGGACGGGACCTCTTGGATAACAATGC
CGTGAATCTTCTGATGGCCTTTGCAATGAGTGTTGGGGCTATGGGTGCTG
CAAGTTGGGCCTGGGGTTTAAATCTGGCTGACTTGGCTTTGTGGTAG back to topCoding sequence (CDS) from alignment at OGUI01000004.1:539805..541101- >ATCC64974_28290-T1 ID=ATCC64974_28290-T1|Name=ATCC64974_28290-T1|organism=Aspergillus niger N402|type=CDS|length=4440bp|location=Sequence derived from alignment at OGUI01000004.1:539805..541101- (Aspergillus niger N402)
GTCCTTGTTCACCCCTCTTCTACTAAGCCCGGCGTCCCAGCTGATACCAC
CGGTCTGAAGCCTGCCGGATCAAGCTCGAGTGCGCAGGTACACGCCACAG
AGGCAGTCGCTAACACTGCCACTCTGAAAGGAACCAGGGCTACTGGAACG
TCGACGGGGACGTCCGCAGGAGAAATTGAATCGGGACACGAAAGCCGGAG
GGTAGAGAGTGGACGGGACCTCTTGGATAACAATGCCGTGAATCTTCTGA
TGGCCTTTGCAATGAGTGTTGGGGCTATGGGTGCTGCAAGTTGGGCCTGG
GGTTTAAATCTGGCTGACTTGGCTTTGTGGTAGGAACTACGCCGCTGTCG
CCGCTGATACATACTCCTCCGAGCTTGGTATTCTGTCCAAGTCCAAACCC
CGCCTGATCACCTCTCCCACGTTCCGCGTTGTCCCCCCCGGTACCAATGG
CGGTGTAACGGGCACCGGACTCCTAGCAGGAGTGGTGGGTGCATTTACAA
TTGCCGTGTCATCCGCTGCTATTCTACCTTTCTGCTCCGAAGGCGATACT
CTCTCGACACTCAAGAGCCGGGCTCAGTGGATTCTGGCTGTGACAATGTG
GGGAGGTTTGGGCAGTGTGCTGGATAGTGTCTTGGGTGGATTGCTCCAGG
CCAGCGTGGTGGACAAGAGAACAGGAAAGGTCATCGAAGGAGCCGGTGGC
CAGAAGGTTAAACACGATGTCAAAGCTCGTTTGACGCTCTCCGCGACCGG
CTCCGAGGGCGGCGAGGGTCAACGTACCCACATCCAAGTCCTGGCGAACT
CTGTTGTCGCGACAGTGCTTGCTCTCCTACATACATATGTTCTGGCAGGG
AAGCCTGCGAGCGCAACACAGTGCTTTTCGAATGGTCATGATGTGGCGGA
TCTGTTGGTCGTGGGAATAGTCGCATGAAACCATACATCGGTATCCCAGC
GGTGATAGTGCTCGTTCATCGTGCTTGGTCGCGAAAGTCGCTGACCACCC
CCGGCCTCATTGCGGCTGCGCTGACGGCCAGCGCCCATGCTCTTCATCCA
TGGTCCGCTCCTTTTGTCTTATTAGGAGTATTCTACTTTGGGGGCACCAA
AGTTACCAAGGTCCTTGTTCACCCCTCTTCTACTAAGCCCGGCGTCCCAG
CTGATACCACCGGTCTGAAGCCTGCCGGATCAAGCTCGAGTGCGCAGGTA
CACGCCACAGAGGCAGTCGCTAACACTGCCACTCTGAAAGGAACCAGGGC
TACTGGAACGTCGACGGGGACGTCCGCAGGAGAAATTGAATCGGGACACG
AAAGCCGGAGGGTAGAGAGTGGACGGGACCTCTTGGATAACAATGCCGTG
AATCTTCTGATGGCCTTTGCAATGAGTGTTGGGGCTATGGGTGCTGCAAG
TTGGGCCTGGGGTTTAAATCTGGCTGACTTGGCTTTGTGGTAGGAACTAC
GCCGCTGTCGCCGCTGATACATACTCCTCCGAGCTTGGTATTCTGTCCAA
GTCCAAACCCCGCCTGATCACCTCTCCCACGTTCCGCGTTGTCCCCCCCG
GTACCAATGGCGGTGTAACGGGCACCGGACTCCTAGCAGGAGTGGTGGGT
GCATTTACAATTGCCGTGTCATCCGCTGCTATTCTACCTTTCTGCTCCGA
AGGCGATACTCTCTCGACACTCAAGAGCCGGGCTCAGTGGATTCTGGCTG
TGACAATGTGGGGAGGTTTGGGCAGTGTGCTGGATAGTGTCTTGGGTGGA
TTGCTCCAGGCCAGCGTGGTGGACAAGAGAACAGGAAAGGTCATCGAAGG
AGCCGGTGGCCAGAAGGTTAAACACGATGTCAAAGCTCGTTTGACGCTCT
CCGCGACCGGCTCCGAGGGCGGCGAGGGTCAACGTACCCACATCCAAGTC
CTGGCGAACTCTGTTGTCGCGACAGTGCTTGCTCTCCTACATACATATGT
TCTGGCAGGGAAGCCTGCGAGCGCAACACAGTGCTTTTCGAATGGTCATG
ATGTGGCGGATCTGTTGGTCGTGGGAATAGTCGCATGAAACCATACATCG
GTATCCCAGCGGTGATAGTGCTCGTTCATCGTGCTTGGTCGCGAAAGTCG
CTGACCACCCCCGGCCTCATTGCGGCTGCGCTGACGGCCAGCGCCCATGC
TCTTCATCCATGGTCCGCTCCTTTTGTCTTATTAGGAGTATTCTACTTTG
GGGGCACCAAAGTTACCAAGGTCCTTGTTCACCCCTCTTCTACTAAGCCC
GGCGTCCCAGCTGATACCACCGGTCTGAAGCCTGCCGGATCAAGCTCGAG
TGCGCAGGTACACGCCACAGAGGCAGTCGCTAACACTGCCACTCTGAAAG
GAACCAGGGCTACTGGAACGTCGACGGGGACGTCCGCAGGAGAAATTGAA
TCGGGACACGAAAGCCGGAGGGTAGAGAGTGGACGGGACCTCTTGGATAA
CAATGCCGTGAATCTTCTGATGGCCTTTGCAATGAGTGTTGGGGCTATGG
GTGCTGCAAGTTGGGCCTGGGGTTTAAATCTGGCTGACTTGGCTTTGTGG
TAGGAACTACGCCGCTGTCGCCGCTGATACATACTCCTCCGAGCTTGGTA
TTCTGTCCAAGTCCAAACCCCGCCTGATCACCTCTCCCACGTTCCGCGTT
GTCCCCCCCGGTACCAATGGCGGTGTAACGGGCACCGGACTCCTAGCAGG
AGTGGTGGGTGCATTTACAATTGCCGTGTCATCCGCTGCTATTCTACCTT
TCTGCTCCGAAGGCGATACTCTCTCGACACTCAAGAGCCGGGCTCAGTGG
ATTCTGGCTGTGACAATGTGGGGAGGTTTGGGCAGTGTGCTGGATAGTGT
CTTGGGTGGATTGCTCCAGGCCAGCGTGGTGGACAAGAGAACAGGAAAGG
TCATCGAAGGAGCCGGTGGCCAGAAGGTTAAACACGATGTCAAAGCTCGT
TTGACGCTCTCCGCGACCGGCTCCGAGGGCGGCGAGGGTCAACGTACCCA
CATCCAAGTCCTGGCGAACTCTGTTGTCGCGACAGTGCTTGCTCTCCTAC
ATACATATGTTCTGGCAGGGAAGCCTGCGAGCGCAACACAGTGCTTTTCG
AATGGTCATGATGTGGCGGATCTGTTGGTCGTGGGAATAGTCGCATGAAA
CCATACATCGGTATCCCAGCGGTGATAGTGCTCGTTCATCGTGCTTGGTC
GCGAAAGTCGCTGACCACCCCCGGCCTCATTGCGGCTGCGCTGACGGCCA
GCGCCCATGCTCTTCATCCATGGTCCGCTCCTTTTGTCTTATTAGGAGTA
TTCTACTTTGGGGGCACCAAAGTTACCAAGGTCCTTGTTCACCCCTCTTC
TACTAAGCCCGGCGTCCCAGCTGATACCACCGGTCTGAAGCCTGCCGGAT
CAAGCTCGAGTGCGCAGGTACACGCCACAGAGGCAGTCGCTAACACTGCC
ACTCTGAAAGGAACCAGGGCTACTGGAACGTCGACGGGGACGTCCGCAGG
AGAAATTGAATCGGGACACGAAAGCCGGAGGGTAGAGAGTGGACGGGACC
TCTTGGATAACAATGCCGTGAATCTTCTGATGGCCTTTGCAATGAGTGTT
GGGGCTATGGGTGCTGCAAGTTGGGCCTGGGGTTTAAATCTGGCTGACTT
GGCTTTGTGGTAGGAACTACGCCGCTGTCGCCGCTGATACATACTCCTCC
GAGCTTGGTATTCTGTCCAAGTCCAAACCCCGCCTGATCACCTCTCCCAC
GTTCCGCGTTGTCCCCCCCGGTACCAATGGCGGTGTAACGGGCACCGGAC
TCCTAGCAGGAGTGGTGGGTGCATTTACAATTGCCGTGTCATCCGCTGCT
ATTCTACCTTTCTGCTCCGAAGGCGATACTCTCTCGACACTCAAGAGCCG
GGCTCAGTGGATTCTGGCTGTGACAATGTGGGGAGGTTTGGGCAGTGTGC
TGGATAGTGTCTTGGGTGGATTGCTCCAGGCCAGCGTGGTGGACAAGAGA
ACAGGAAAGGTCATCGAAGGAGCCGGTGGCCAGAAGGTTAAACACGATGT
CAAAGCTCGTTTGACGCTCTCCGCGACCGGCTCCGAGGGCGGCGAGGGTC
AACGTACCCACATCCAAGTCCTGGCGAACTCTGTTGTCGCGACAGTGCTT
GCTCTCCTACATACATATGTTCTGGCAGGGAAGCCTGCGAGCGCAACACA
GTGCTTTTCGAATGGTCATGATGTGGCGGATCTGTTGGTCGTGGGAATAG
TCGCATGAAACCATACATCGGTATCCCAGCGGTGATAGTGCTCGTTCATC
GTGCTTGGTCGCGAAAGTCGCTGACCACCCCCGGCCTCATTGCGGCTGCG
CTGACGGCCAGCGCCCATGCTCTTCATCCATGGTCCGCTCCTTTTGTCTT
ATTAGGAGTATTCTACTTTGGGGGCACCAAAGTTACCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_28290-T1 | ATCC64974_28290-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR002794 |
| DBxref | PFAM:PF01940 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000004.1 | supercontig | OGUI01000004.1:539805..541101 - |
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