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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000005.1:1447118..1447699- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_37650-T1 ID=ATCC64974_37650-T1|Name=ATCC64974_37650-T1|organism=Aspergillus niger N402|type=mRNA|length=582bp|location=Sequence derived from alignment at OGUI01000005.1:1447118..1447699- (Aspergillus niger N402)
ATGGATTCTCAACCGTCATCGAAAGCGCTTCATTGTAAGCCGTACCCTGC
ATTTTTCACTTACCTCAGTTCCAAACCCCTCCATTGCACCGCTAACAACC
ATCCGTCGCAGATCGCATCAACACCAACATCTCGCAATTACTCCAACGCT
TCGAGAACATCATGGCAACAGCGACTGTTAGCTCACCTCACCCTCTTGCA
ATCTACACAAACCGGATAATCACTAACCCAGAAATCCAGACCGAAAGTAC
CAGCCACACCTCCACGGCCGTCGAGACATACCAGCTAGATGTGGAATCCA
CAGCGTTGGTACGTTCCAACTAATGCTCCTCTAATCCAACACAAACACAA
ATCCTACAATGTCAGGGAACACTTACTTACAGAATTGAATCTGAGATAGG
TCCGCGCAGCAGAAGACATCCTCGCCCTGACCCGGACAATGAAAGAAACC
TGGTTATTCGGGAAACTCGACACACTAGGCGAAGACGAAGCGGACGTGAA
ACGTCGCGAGGAACTAGAGATGAATGCGGAGGCGATTCAAAAGGCCATTG
AAGATGGGGGGTTTTTGAAGGCTGCTAAGTGA back to topCoding sequence (CDS) from alignment at OGUI01000005.1:1447118..1447699- >ATCC64974_37650-T1 ID=ATCC64974_37650-T1|Name=ATCC64974_37650-T1|organism=Aspergillus niger N402|type=CDS|length=1404bp|location=Sequence derived from alignment at OGUI01000005.1:1447118..1447699- (Aspergillus niger N402)
GTCCGCGCAGCAGAAGACATCCTCGCCCTGACCCGGACAATGAAAGAAAC
CTGGTTATTCGGGAAACTCGACACACTAGGCGAAGACGAAGCGGACGTGA
AACGTCGCGAGGAACTAGAGATGAATGCGGAGGCGATTCAAAAGGCCATT
GAAGATGGGGGGTTTTTGAAGGCTGCTAAGTGAACCGAAAGTACCAGCCA
CACCTCCACGGCCGTCGAGACATACCAGCTAGATGTGGAATCCACAGCGT
TGATCGCATCAACACCAACATCTCGCAATTACTCCAACGCTTCGAGAACA
TCATGGCAACAGCGACTATGGATTCTCAACCGTCATCGAAAGCGCTTCAT
TGTCCGCGCAGCAGAAGACATCCTCGCCCTGACCCGGACAATGAAAGAAA
CCTGGTTATTCGGGAAACTCGACACACTAGGCGAAGACGAAGCGGACGTG
AAACGTCGCGAGGAACTAGAGATGAATGCGGAGGCGATTCAAAAGGCCAT
TGAAGATGGGGGGTTTTTGAAGGCTGCTAAGTGAACCGAAAGTACCAGCC
ACACCTCCACGGCCGTCGAGACATACCAGCTAGATGTGGAATCCACAGCG
TTGATCGCATCAACACCAACATCTCGCAATTACTCCAACGCTTCGAGAAC
ATCATGGCAACAGCGACTATGGATTCTCAACCGTCATCGAAAGCGCTTCA
TTGTCCGCGCAGCAGAAGACATCCTCGCCCTGACCCGGACAATGAAAGAA
ACCTGGTTATTCGGGAAACTCGACACACTAGGCGAAGACGAAGCGGACGT
GAAACGTCGCGAGGAACTAGAGATGAATGCGGAGGCGATTCAAAAGGCCA
TTGAAGATGGGGGGTTTTTGAAGGCTGCTAAGTGAACCGAAAGTACCAGC
CACACCTCCACGGCCGTCGAGACATACCAGCTAGATGTGGAATCCACAGC
GTTGATCGCATCAACACCAACATCTCGCAATTACTCCAACGCTTCGAGAA
CATCATGGCAACAGCGACTATGGATTCTCAACCGTCATCGAAAGCGCTTC
ATTGTCCGCGCAGCAGAAGACATCCTCGCCCTGACCCGGACAATGAAAGA
AACCTGGTTATTCGGGAAACTCGACACACTAGGCGAAGACGAAGCGGACG
TGAAACGTCGCGAGGAACTAGAGATGAATGCGGAGGCGATTCAAAAGGCC
ATTGAAGATGGGGGGTTTTTGAAGGCTGCTAAGTGAACCGAAAGTACCAG
CCACACCTCCACGGCCGTCGAGACATACCAGCTAGATGTGGAATCCACAG
CGTTGATCGCATCAACACCAACATCTCGCAATTACTCCAACGCTTCGAGA
ACATCATGGCAACAGCGACTATGGATTCTCAACCGTCATCGAAAGCGCTT
CATT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_37650-T1 | ATCC64974_37650-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR038427 |
| DBxref | InterPro:IPR009332 |
| DBxref | PFAM:PF06179 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000005.1 | supercontig | OGUI01000005.1:1447118..1447699 - |
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